prot_D-herbacea_F_contig1.111.1 (polypeptide) Desmarestia herbacea DmunF female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-herbacea_F_contig1.111.1
Unique Nameprot_D-herbacea_F_contig1.111.1
Typepolypeptide
OrganismDesmarestia herbacea DmunF female (Desmarestia herbacea DmunF female)
Sequence length408
Homology
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BLAST of mRNA_D-herbacea_F_contig1.111.1 vs. uniprot
Match: A0A6H5KVY2_9PHAE (TAZ-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY2_9PHAE)

HSP 1 Score: 213 bits (543), Expect = 9.390e-58
Identity = 184/406 (45.32%), Postives = 212/406 (52.22%), Query Frame = 0 
Query:   39 EMQARLESMQHKFGSHLAFLVTEFTKMEAHLSPEVEAGGPKTDDASEEEEDGPQQALARLRFFITHVKNTRERMEQARSGLHHYTCSQLDMLEEHITQRLLPVKDRMLAQLARESERMEKSNNAAATEV----------------ASSYLTSSSG-----TAVSDDWMDSSDG------------MLNDGASSTEAIPGGDYSGLTSSSSSMARPCSSLSLADLGDLCGDEDADDDCGGAFLVG-RDCD--VGGSGIVLDLYGLGQG-KDSFLPLSRDRSTERSASISTLSSVS-AMTDGE-FSGDALSVDADCSAGGG-------------------------------EGHP--------GAASSATLKGG-----SGIDQEMGELSELFAPDAFLLSTVLDTE 361
            EM++RL +MQ +FG+ L FLVTEFTK+EA LS  +E  G  T  A+  +E+ PQQ L RLRFFI HVK T +RM+QAR GLHHYT  QLDMLEEHIT RLLPVK RMLAQLA+                                 + +L    G     TAVSD W+  S                     +            T+SS+S+ R CSSLS ADLGDLCGD++     GG FLVG  DCD  V GSGI LDLY LGQG KD FLP  + R+  R +SIST SS S A TD E  S D+LS+DADCS   G                               E  P        GA       GG     SGIDQEM ELSELFAPDAFL+STVLDTE
Sbjct:   99 EMRSRLTTMQDRFGAQLHFLVTEFTKLEAQLS--LEWTGSTT--AAVGDENSPQQQLGRLRFFIEHVKRTTDRMDQARRGLHHYTSEQLDMLEEHITHRLLPVKKRMLAQLAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGNLFLGGIGGGKDGATAVSDGWVVGSPSPPLXXXXXXXXXXXXXXRVNISTCDSDRQLSATTSSASLPRACSSLSFADLGDLCGDQEG----GGVFLVGGEDCDDDVHGSGIGLDLYDLGQGGKDPFLPEGQQRAG-RWSSISTRSSYSTASTDEEELSDDSLSIDADCSGSSGTPCSPSALGSGESSLLAAAAAATRATKAVITEARPDGSACVEAGAVPEGVAAGGASASKSGIDQEMRELSELFAPDAFLMSTVLDTE 495
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BLAST of mRNA_D-herbacea_F_contig1.111.1 vs. uniprot
Match: D7FUA8_ECTSI (TAZ-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA8_ECTSI)

HSP 1 Score: 120 bits (302), Expect = 6.390e-26
Identity = 105/208 (50.48%), Postives = 115/208 (55.29%), Query Frame = 0 
Query:  204 GGDYSGLTSSSSSMARPCSSLSLADLGDLCGDEDADDDCGGAFLVG-RDCD--VGGSGIVLDLYGLGQG-KDSFLPLSRDRSTERSASISTLSSVS-AMTDGE-FSGDALSVDADCSAGGG-------------------------------EGHP--------GAASSATLKGG-----SGIDQEMGELSELFAPDAFLLSTVLDTE 361
            GG  SG T+SS+S+ R CSSLS ADLGDLCGD++  D     FLVG  DCD    GSGI LDLY LGQG KD FLP  + R+  R +SIST SS S A TDGE  S D+LSVDADCS                                   E  P        GA       GG     SGIDQEMGELSELFAPDAFL+STVLDTE
Sbjct:   97 GGQLSG-TTSSASLPRACSSLSFADLGDLCGDQEGGD----VFLVGGEDCDDDAHGSGIGLDLYDLGQGGKDPFLPEGQQRAG-RWSSISTRSSSSTASTDGEELSDDSLSVDADCSGSSSTPCSPXXVXXXXXXXXXXXXXXXXXAKAIKTEARPDGSAGLEAGAVQQGVAAGGASATKSGIDQEMGELSELFAPDAFLMSTVLDTE 298
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BLAST of mRNA_D-herbacea_F_contig1.111.1 vs. uniprot
Match: A0A835YXC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXC4_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 8.050e-5
Identity = 28/68 (41.18%), Postives = 44/68 (64.71%), Query Frame = 0 
Query:   85 EEEEDGPQQALARLRFFITHVKNTRERMEQAR--SGLHHYTCSQLDMLEEHITQRLLPVKDRMLAQLA 150
            ++E+    Q LAR+R+F+ +V  T +R+       G+  Y   QL +LE+HIT  +LPV+DR+LAQ+A
Sbjct:   20 DDEDSAAHQTLARMRYFLANVSGTMDRLSGGPPPKGVKPYDMHQLGLLEKHITDNILPVRDRLLAQMA 87
The following BLAST results are available for this feature:
BLAST of mRNA_D-herbacea_F_contig1.111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KVY2_9PHAE9.390e-5845.32TAZ-type domain-containing protein n=1 Tax=Ectocar... [more]
D7FUA8_ECTSI6.390e-2650.48TAZ-type domain-containing protein n=1 Tax=Ectocar... [more]
A0A835YXC4_9STRA8.050e-541.18Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Desmarestia herbacea DmunF female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 142..166
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 20..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..408
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-herbacea_F_contig1contigD-herbacea_F_contig1:2812829..2826526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Desmarestia herbacea DmunF female2022-09-29
Diamond blastp: OGS1.0 of Desmarestia herbacea DmunF female vs UniRef902022-09-16
OGS1.0 of Desmarestia herbacea DmunF female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-herbacea_F_contig1.111.1mRNA_D-herbacea_F_contig1.111.1Desmarestia herbacea DmunF femalemRNAD-herbacea_F_contig1 2812827..2826526 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-herbacea_F_contig1.111.1 ID=prot_D-herbacea_F_contig1.111.1|Name=mRNA_D-herbacea_F_contig1.111.1|organism=Desmarestia herbacea DmunF female|type=polypeptide|length=408bp
KRASRSRKAAGASIGTAAATASAKSPPFKAVQELQPSPEMQARLESMQHK
FGSHLAFLVTEFTKMEAHLSPEVEAGGPKTDDASEEEEDGPQQALARLRF
FITHVKNTRERMEQARSGLHHYTCSQLDMLEEHITQRLLPVKDRMLAQLA
RESERMEKSNNAAATEVASSYLTSSSGTAVSDDWMDSSDGMLNDGASSTE
AIPGGDYSGLTSSSSSMARPCSSLSLADLGDLCGDEDADDDCGGAFLVGR
DCDVGGSGIVLDLYGLGQGKDSFLPLSRDRSTERSASISTLSSVSAMTDG
EFSGDALSVDADCSAGGGEGHPGAASSATLKGGSGIDQEMGELSELFAPD
AFLLSTVLDTEEMEVTAEEMAVSETAAAVAAPVQVDANAEERGVKKADGS
MAASTVAD
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