mRNA_D-dudresnayi_contig10211.247.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10211.247.1
Unique NamemRNA_D-dudresnayi_contig10211.247.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A6H5JUC6_9PHAE (TOPEUc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC6_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 9.230e-111
Identity = 167/203 (82.27%), Postives = 178/203 (87.68%), Query Frame = 1
Query:   22 PRKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLAEQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALNCA 630
            P+K K++TR EKI +AM VY WWEEPAH PGKQWDSLEH GA FA EYKPHG+KLKYDGK+V LT QQEEVATFYASMPL+GPQLAEQG VFNKNFFTDFK VLGKGH IKDFKLLDFSAIRAHL+  KQIKRAATDGEKA AKT KEEL HKYSYAIVD HLEK+GNYNVEPP LFRGRG+HPKTG LKARV   DIA+NCA
Sbjct:  387 PKKPKKLTRAEKIEKAMKVYMWWEEPAHEPGKQWDSLEHNGAHFAPEYKPHGVKLKYDGKEVNLTTQQEEVATFYASMPLDGPQLAEQGKVFNKNFFTDFKAVLGKGHFIKDFKLLDFSAIRAHLDITKQIKRAATDGEKAAAKTVKEELVHKYSYAIVDGHLEKVGNYNVEPPGLFRGRGEHPKTGKLKARVTASDIAINCA 589          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: D7G042_ECTSI (TOPEUc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G042_ECTSI)

HSP 1 Score: 346 bits (888), Expect = 4.460e-109
Identity = 168/204 (82.35%), Postives = 178/204 (87.25%), Query Frame = 1
Query:   22 PRKFKEMT-RTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLAEQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALNCA 630
            P+ FKEMT R EKI +AM VY WWEEPAH PGKQWDSLEH GA FA EYKPHG+KLKYDGK+V+LT QQEEVATFYASMPL+GPQLAEQG VFNKNFFTDFK VLGKGH IKDFKLLDFSAIRAHL+  KQIK AATDGEKA AKT KEEL HKYSYAIVD HLEK+GNYNVEPP LFRGRG+HPKTG LKARV   DIA+NCA
Sbjct:  334 PKGFKEMTTRAEKIEKAMKVYMWWEEPAHEPGKQWDSLEHNGAHFAPEYKPHGVKLKYDGKEVHLTTQQEEVATFYASMPLDGPQLAEQGKVFNKNFFTDFKAVLGKGHVIKDFKLLDFSAIRAHLDITKQIKLAATDGEKAAAKTVKEELVHKYSYAIVDGHLEKVGNYNVEPPGLFRGRGEHPKTGKLKARVTASDIAINCA 537          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A7S2WTQ7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTQ7_9STRA)

HSP 1 Score: 229 bits (584), Expect = 3.210e-67
Identity = 116/213 (54.46%), Postives = 141/213 (66.20%), Query Frame = 1
Query:    1 GASGETKPR---KFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLA--EQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 624
            GA    KP    K K+ T+ E++ QAM  YKWWE      G+QW +LEH G  F  EYKPHG+ LKY+GKD+ L P  EE+ATFY  +P +GPQL   E   +F KNFFTDFK  LG  H+IK F+  DFSAIR H+E  + IK+AAT+ EK  AK  K+ L  KY YA+VD HLEKIGN   EPPSLFRGRGKHP  G +K RV+P  + +N
Sbjct:  128 GARKAAKPEAMGKLKKFTKVERLDQAMKSYKWWEHEDLPAGQQWRTLEHNGLCFPPEYKPHGVALKYEGKDLVLPPDLEELATFYGLVPDDGPQLGDPETRPIFQKNFFTDFKKALGGEHEIKKFQGCDFSAIREHIEKERLIKKAATEVEKQAAKEEKQSLQFKYGYALVDGHLEKIGNTMAEPPSLFRGRGKHPLMGKVKQRVLPEQVTIN 340          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A7S2MAS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MAS9_9STRA)

HSP 1 Score: 216 bits (551), Expect = 3.430e-66
Identity = 100/200 (50.00%), Postives = 134/200 (67.00%), Query Frame = 1
Query:   31 FKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQL--AEQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 624
             K++ ++E+I+ AM  Y WW       G+QW  +EH G  F   Y+PHG+K++YDGK+V LTP +EE ATF+A+M  +G  L  ++   +F KNFFTDFK +LGK H IKDFK  DF+ I AHL+  K +++A TD E+   K  K+    K+ YA+VD HLEK+GNYN+EPP  FRGRG+HPK G LK RV P  + LN
Sbjct:  120 LKQLDKSERISHAMQAYLWWNADDPPKGQQWCKMEHAGVSFPEGYEPHGVKMRYDGKEVDLTPVEEEAATFFAAMDPDGMHLGNSKTAPIFKKNFFTDFKAILGKNHVIKDFKKCDFTPITAHLDEQKIVRKAITDAERKQNKNVKDTAMFKFGYALVDGHLEKVGNYNMEPPGAFRGRGEHPKMGKLKQRVDPEQVMLN 319          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: F0YL16_AURAN (TOPEUc domain-containing protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL16_AURAN)

HSP 1 Score: 221 bits (564), Expect = 3.070e-65
Identity = 107/212 (50.47%), Postives = 140/212 (66.04%), Query Frame = 1
Query:    1 GASGETKPRKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLAEQGA---VFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALNC 627
            G+ GE    K K+M   E   Q +  ++WW  P    GK W +LEH G  F  +YKPHGI + YDG  + LTP QEE+ATFYA+MP +GPQL   G    +F +NF+ D+  VLGK H IK F   DFS I  HL+  K +KRAA+D EK VA+  +++   +  YAI+DDHLEK+GN+ +EPPSLFRGRGKHPKTG++K RV P  +++NC
Sbjct:   51 GSDGEISAMKRKKMKSAE---QGIAAFEWWNSPDPPEGKAWQTLEHCGMTFEPQYKPHGIAMVYDGVPISLTPYQEELATFYAAMPEDGPQLNVSGGQREIFQRNFWDDWHKVLGKSHAIKSFDKCDFSDISKHLDRLKFVKRAASDAEKVVARELRDDCQLRSGYAILDDHLEKVGNFRMEPPSLFRGRGKHPKTGVVKLRVEPDQVSINC 259          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A836C9X0_9STRA (DNA topoisomerase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X0_9STRA)

HSP 1 Score: 222 bits (566), Expect = 3.690e-65
Identity = 102/189 (53.97%), Postives = 134/189 (70.90%), Query Frame = 1
Query:   70 MTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLAEQGA--VFNKNFFTDFKTVLGKGHKIKDFKL--LDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 624
            +  YKWWEEP  APG+QW  LEH G  F  EY+PHG+ L YDG+++ L+P+ EE+ATF+A +PL+GPQL +     VF+ NFF+D+K  +  GH +K+ K    DF A+RAHL+  + IK+AATDGE+A AK  KE   H +  AIVD HLEK+GN+ +EPP LFRGRGKHPKTG LK R  P ++ +N
Sbjct:   53 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVN 241          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A485L6E4_9STRA (DNA topoisomerase I n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L6E4_9STRA)

HSP 1 Score: 221 bits (564), Expect = 6.760e-65
Identity = 104/202 (51.49%), Postives = 136/202 (67.33%), Query Frame = 1
Query:   25 RKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLA--EQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 624
            RK K  +++E++  A+  Y+WW       G QW SLEH G LF S Y+PHG+ L Y+GK V LTP QEE+A+F+A+MPL+GPQL   +   +F KNFF DFK+ LGKGH IKD K  DF  IR HL   + +K+  T  EKA  K  K+E   ++ +AIVD HLEK+GN+ +EPP LFRGRG+HPKTG LK  V P ++ +N
Sbjct:   97 RKLKVQSKSERLDMAIKSYRWWNADELPEGIQWRSLEHNGVLFPSVYEPHGVPLLYEGKPVDLTPAQEEIASFFAAMPLDGPQLGNPKTADMFTKNFFADFKSALGKGHAIKDIKKCDFEKIRTHLNELRDVKKERTKEEKAPEKAKKDEELFRHGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKKAVQPGEVTIN 298          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A7S3PD47_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD47_9STRA)

HSP 1 Score: 219 bits (558), Expect = 1.210e-63
Identity = 99/204 (48.53%), Postives = 138/204 (67.65%), Query Frame = 1
Query:   25 RKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLA--EQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALNCA 630
            R+ K++ +T+++  AM  + WWE P  A G  W ++EH+G  F  EY+PHG+K+ YDG+ V LTP QEE ATF+A+M  +G  L   +   +F KNFF DF+ +LGK H IKDFK  DF  IR HL   K I++A +D E+   K  + +  HKY YA+VD H+E++GN+N+EPP  FRGRG+HPK G LK+RV P  ++LNC+
Sbjct:   95 RQLKKLDKTDRLQYAMQAFLWWEAPVLAEGMNWSTMEHSGVSFPEEYEPHGVKMLYDGQPVDLTPAQEEAATFFAAMDPDGMHLGNPKTAPIFIKNFFADFREILGKKHIIKDFKKCDFEPIRKHLNEQKIIRKAISDKERQANKEDRNQTLHKYGYAVVDGHIERVGNFNMEPPGAFRGRGEHPKMGKLKSRVSPEQVSLNCS 298          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A6G0WXZ6_9STRA (TOPEUc domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXZ6_9STRA)

HSP 1 Score: 216 bits (550), Expect = 4.690e-63
Identity = 104/202 (51.49%), Postives = 131/202 (64.85%), Query Frame = 1
Query:   25 RKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLA--EQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 624
            RK K   ++E++  A+  Y+WW       G QW SLEH G LF   Y PHGI L YDG+   LTP+QEE+A+F+AS+PL+GPQL   +  A+F KNFF DFK  LGK H IKD K  DF  IR HL T +  ++  T  EKA  K  K E    + +AIVD HLEK+GN+ +EPP LFRGRG+HPKTG LK  VMP ++ +N
Sbjct:   83 RKLKVQNKSERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVLFPPTYVPHGIPLLYDGQPAELTPEQEEIASFFASIPLDGPQLGNPKTAAMFTKNFFADFKASLGKNHVIKDIKKCDFEKIRTHLNTLRDERKERTKEEKAPEKAKKNEELFHHGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKKAVMPEEVTIN 284          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A024UDN4_9STRA (DNA topoisomerase I n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UDN4_9STRA)

HSP 1 Score: 216 bits (549), Expect = 1.130e-62
Identity = 102/202 (50.50%), Postives = 134/202 (66.34%), Query Frame = 1
Query:   25 RKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLA--EQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 624
            RK K   ++E++  A+  Y+WW       G QW SLEH G LF   Y+PHGI L YDG  V LTP+QEE+A+F+A+MP +GPQL   +  A+F KNFF DF+  LGK H IKD K  +F  I+AHL   +  K+  T  EKA  K  K+E  +++ +AIVD HLEK+GN+ +EPP LFRGRG+HPKTG LK  VMP ++ +N
Sbjct:  105 RKLKVQNKSERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVLFPPSYEPHGIPLIYDGVPVTLTPEQEEIASFFAAMPADGPQLGNPKTAAMFTKNFFADFRASLGKNHVIKDIKKCNFERIQAHLNEIRDAKKERTKEEKAPEKAKKDEELYRHGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKKAVMPEEVTIN 306          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUC6_9PHAE9.230e-11182.27TOPEUc domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G042_ECTSI4.460e-10982.35TOPEUc domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S2WTQ7_9STRA3.210e-6754.46Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2MAS9_9STRA3.430e-6650.00Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
F0YL16_AURAN3.070e-6550.47TOPEUc domain-containing protein n=2 Tax=Aureococc... [more]
A0A836C9X0_9STRA3.690e-6553.97DNA topoisomerase I n=1 Tax=Tribonema minus TaxID=... [more]
A0A485L6E4_9STRA6.760e-6551.49DNA topoisomerase I n=1 Tax=Aphanomyces stellatus ... [more]
A0A7S3PD47_9STRA1.210e-6348.53Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A6G0WXZ6_9STRA4.690e-6351.49TOPEUc domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A024UDN4_9STRA1.130e-6250.50DNA topoisomerase I n=2 Tax=Aphanomyces invadans T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10211contigD-dudresnayi_contig10211:4469..6763 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score348.2
Seed ortholog evalue2.7e-93
Seed eggNOG ortholog2880.D7G042
Preferred nameTOP1
KEGG koko:K03163
GOsGO:0000166,GO:0000228,GO:0000932,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001067,GO:0001650,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003697,GO:0003824,GO:0003916,GO:0003917,GO:0004672,GO:0004674,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005694,GO:0005730,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006265,GO:0006325,GO:0006338,GO:0006464,GO:0006468,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007059,GO:0007623,GO:0008144,GO:0008150,GO:0008152,GO:0008219,GO:0009058,GO:0009059,GO:0009330,GO:0009987,GO:0010468,GO:0012501,GO:0016043,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016853,GO:0017076,GO:0018105,GO:0018193,GO:0018209,GO:0019222,GO:0019538,GO:0019904,GO:0030554,GO:0031298,GO:0031974,GO:0031981,GO:0032501,GO:0032553,GO:0032555,GO:0032559,GO:0032922,GO:0032991,GO:0032993,GO:0034641,GO:0034645,GO:0035639,GO:0035770,GO:0036094,GO:0036211,GO:0036464,GO:0042221,GO:0042493,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043565,GO:0043596,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044452,GO:0044454,GO:0044464,GO:0046483,GO:0048511,GO:0050789,GO:0050896,GO:0051276,GO:0060255,GO:0065007,GO:0070013,GO:0071103,GO:0071704,GO:0071840,GO:0090304,GO:0097100,GO:0097159,GO:0097367,GO:0140096,GO:0140097,GO:1901265,GO:1901360,GO:1901363,GO:1901564,GO:1901576,GO:1990837,GO:1990904
EggNOG free text desc.DNA topoisomerase type I activity
EggNOG OGsCOG3569@1,KOG0981@2759
EC5.99.1.2
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03032
Hectar predicted targeting categoryother localisation
Exons4
Model size633
Cds size630
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10211.247.1prot_D-dudresnayi_contig10211.247.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10211 4470..6763 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927520.0827086-CDS-D-dudresnayi_contig10211:4469..46251622927520.0827086-CDS-D-dudresnayi_contig10211:4469..4625Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10211 4470..4625 -
1690556790.6908834-CDS-D-dudresnayi_contig10211:4469..46251690556790.6908834-CDS-D-dudresnayi_contig10211:4469..4625Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10211 4470..4625 -
1622927520.0992398-CDS-D-dudresnayi_contig10211:5584..57341622927520.0992398-CDS-D-dudresnayi_contig10211:5584..5734Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10211 5585..5734 -
1690556790.705574-CDS-D-dudresnayi_contig10211:5584..57341690556790.705574-CDS-D-dudresnayi_contig10211:5584..5734Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10211 5585..5734 -
1622927520.1163929-CDS-D-dudresnayi_contig10211:5983..60551622927520.1163929-CDS-D-dudresnayi_contig10211:5983..6055Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10211 5984..6055 -
1690556790.7148895-CDS-D-dudresnayi_contig10211:5983..60551690556790.7148895-CDS-D-dudresnayi_contig10211:5983..6055Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10211 5984..6055 -
1622927520.128979-CDS-D-dudresnayi_contig10211:6511..67631622927520.128979-CDS-D-dudresnayi_contig10211:6511..6763Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10211 6512..6763 -
1690556790.724373-CDS-D-dudresnayi_contig10211:6511..67631690556790.724373-CDS-D-dudresnayi_contig10211:6511..6763Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10211 6512..6763 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10211.247.1

>prot_D-dudresnayi_contig10211.247.1 ID=prot_D-dudresnayi_contig10211.247.1|Name=mRNA_D-dudresnayi_contig10211.247.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=210bp
GASGETKPRKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGAL
FASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLAEQGAVFN
KNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVA
KTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARV
MPCDIALNCA
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mRNA from alignment at D-dudresnayi_contig10211:4469..6763-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10211.247.1 ID=mRNA_D-dudresnayi_contig10211.247.1|Name=mRNA_D-dudresnayi_contig10211.247.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2295bp|location=Sequence derived from alignment at D-dudresnayi_contig10211:4469..6763- (Desmarestia dudresnayi DdudBR16 monoicous)
GGGGCCTCTGGTGAGACCAAGCCGCGGAAGTTCAAGGAGATGACTCGCAC GGAAAAGATCGCCCAAGCGATGACGGTGTACAAGTGGTGGGAAGAGCCCG CGCACGCGCCCGGAAAGCAGTGGGACTCGCTGGAGCACACCGGCGCTCTG TTCGCCTCCGAGTACAAGCCTCACGGCATCAAGCTAAAGTACGACGGTAA GGACGTGTATCTGACGCCGCAGCAGGAGGAGGTCGCTACATTCTACGCAA GCGTGAGTAATTTGTTGTGGGAACGTGTCGTTTATTGGTTGGCGCGCGCT GTTGATGTTGTTGTTGTTGATCGTGGTGTTTCATTTTATTTCATACGTGG GGCGGGGGTGTGGGGTTGAATGCCGCGTGTTCTGCTGTCGATAAGGCGTG AGATGTCAAGGCGGTTGTGCTCGTTTGTTCTGCTGCATTTTAGTGGCCCT TCGATCGGTTAAGTTTTGTGGTCGAAGCCGAAATACGGCGCGTGGTGGCG TGGGTTGCGCGATAGGTGGTATCATCGTCCATGCGACAACTTCCTTTTTT GTTTTTGCAGGAGAAAGCAGCTAAAATTTGCGGCACGGAAGGAAAATTTG TATATGAATTTATTTTACTGCATTAGAGTTGCTGGTTCAAACGATTTTAG TTTGAGCTCACGTCCGTCGCGGCGTTCTCGGCACCCGCTTTTACTTCCCT TATCACAGATGCCGCTCAACGGGCCACAGCTCGCGGAGCAGGGCGCCGTG TTCAACAAGAACTTTTTCACAGACTTCAAGGTAAGTGGGGCGGGCCAACC AACTAGGGAGCAGTGACGGCGATGCGGTGTTGTACTGTCTGTAGGGCGGC CTACCGGTAGAGCCAGTACCACAACAGTAGTGAGCTCGGGCTGAAAGACA TTCAACGTATGCGTTGCACCGTGCGACAAGGTATTTGTTGCAGTAGTAGC CAAAACTGTGCTCGTTGGCGACTATGGTGACTGCATGTACTAACCCCTGT TGTGTTTTTATTTGTGAATCGTTGCACAGACGGTGCTTGGAAAGGGGCAC AAGATCAAAGACTTCAAGCTGCTGGATTTTTCCGCCATCCGCGCCCACCT GGAGACAGCGAAGCAGATCAAACGCGCTGCCACGGACGGGGAGAAGGCAG TGGCCAAGACGGCCAAGGAGGAGCTTACGGTGAGTCAGCAGGCCAACGCG TTTTGGCTGGTGCGCCTCTTTGTGATATTTTGCAAGGTAGTAGTAGTACT GGGGTGGCAAAAGTAGGCCACTGTCTGTCGTGGTCTAGGTAGTTGCCCCT GTGGGCGGAAGTTCGGGGTTCGAATCCCGGTGAGTACACAAATGGCCCAT CTTCCGTCGCGGAAAGCGCGAGAGCGTGAGTAAGCACACAGTTTGATGAA CGTTGACGAGCTACGAGTATGGAAATGCCCAGACCTGTACGTGATTCAAA AATTAAGGCATGTACCAGGGGGGAGAAGGGAAGACACCTGCGGCCAAGGC GTTGCTCAGACAAACGCGCTGAGCGGTGGGTGGAAGAGCTCCTGTGGGCT GGACCTGGGGGAATTTAAAGTGATGGATATAAACACAATTAAAGCAGAAA GTACTGGGTGTGATAGGGAGTGTGTGCCCCCCCCCCTTCTACCCCCTCTT CTCCCTCAAGTAGATGTTATTGCCTTTTTCGAGGTGCTTGTACGGTAGCC GGAAATAGTCCAGCGCAGTTGTTCTGAGGCGGCCTGGTCGGCCCTTGCGA TGATCACTTTCGTTCGCGTGCCCAACTGTGTTCGTTCTCCAAGCAAGTGC TGCTTCGGTGTGTGCATGATGCACCCACAAGAGGAAAAGTCGCGTGTATA TCACTGCACTGCACTGCACACACACACAGAGAGAGAGGCAAGCAGACCAT TTTGAAATTTGCGCTGGGACGTACAAGTATAGAGCTACTGTATTGCAATA GCATATTAATAACGGGACATTGCACTCGAGCCCCGGAAGGGCACAGCCGC GCTGTTATCTACCCCTGCCGGCCACCGTTTGCTTTTTTGTTTGTTTGTTT GCCCGCCGTCGTTTTGCCGACTCACCCTTTCGTCGCTATCTATGGCCTCT ATGATGCCGCGATAATCGTGCCTTTTATATAACTGCAGCACAAGTACAGC TACGCCATCGTGGACGACCACCTGGAGAAAATCGGCAACTACAACGTCGA ACCTCCGTCGCTGTTCCGAGGGCGAGGCAAGCACCCCAAGACGGGCATGC TCAAGGCGAGGGTAATGCCCTGCGACATCGCCCTCAACTGCGCCG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10211:4469..6763-

>mRNA_D-dudresnayi_contig10211.247.1 ID=mRNA_D-dudresnayi_contig10211.247.1|Name=mRNA_D-dudresnayi_contig10211.247.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1260bp|location=Sequence derived from alignment at D-dudresnayi_contig10211:4469..6763- (Desmarestia dudresnayi DdudBR16 monoicous)
GGGGCCTCTGGTGAGACCAAGCCGCGGAAGTTCAAGGAGATGACTCGCAC
GGAAAAGATCGCCCAAGCGATGACGGTGTACAAGTGGTGGGAAGAGCCCG
CGCACGCGCCCGGAAAGCAGTGGGACTCGCTGGAGCACACCGGCGCTCTG
TTCGCCTCCGAGTACAAGCCTCACGGCATCAAGCTAAAGTACGACGGTAA
GGACGTGTATCTGACGCCGCAGCAGGAGGAGGTCGCTACATTCTACGCAA
GCGGGGCCTCTGGTGAGACCAAGCCGCGGAAGTTCAAGGAGATGACTCGC
ACGGAAAAGATCGCCCAAGCGATGACGGTGTACAAGTGGTGGGAAGAGCC
CGCGCACGCGCCCGGAAAGCAGTGGGACTCGCTGGAGCACACCGGCGCTC
TGTTCGCCTCCGAGTACAAGCCTCACGGCATCAAGCTAAAGTACGACGGT
AAGGACGTGTATCTGACGCCGCAGCAGGAGGAGGTCGCTACATTCTACGC
AAGCATGCCGCTCAACGGGCCACAGCTCGCGGAGCAGGGCGCCGTGTTCA
ACAAGAACTTTTTCACAGACTTCAAGATGCCGCTCAACGGGCCACAGCTC
GCGGAGCAGGGCGCCGTGTTCAACAAGAACTTTTTCACAGACTTCAAGAC
GGTGCTTGGAAAGGGGCACAAGATCAAAGACTTCAAGCTGCTGGATTTTT
CCGCCATCCGCGCCCACCTGGAGACAGCGAAGCAGATCAAACGCGCTGCC
ACGGACGGGGAGAAGGCAGTGGCCAAGACGGCCAAGGAGGAGCTTACGAC
GGTGCTTGGAAAGGGGCACAAGATCAAAGACTTCAAGCTGCTGGATTTTT
CCGCCATCCGCGCCCACCTGGAGACAGCGAAGCAGATCAAACGCGCTGCC
ACGGACGGGGAGAAGGCAGTGGCCAAGACGGCCAAGGAGGAGCTTACGCA
CAAGTACAGCTACGCCATCGTGGACGACCACCTGGAGAAAATCGGCAACT
ACAACGTCGAACCTCCGTCGCTGTTCCGAGGGCGAGGCAAGCACCCCAAG
ACGGGCATGCTCAAGGCGAGGGTAATGCCCTGCGACATCGCCCTCAACTG
CGCCCACAAGTACAGCTACGCCATCGTGGACGACCACCTGGAGAAAATCG
GCAACTACAACGTCGAACCTCCGTCGCTGTTCCGAGGGCGAGGCAAGCAC
CCCAAGACGGGCATGCTCAAGGCGAGGGTAATGCCCTGCGACATCGCCCT
CAACTGCGCC
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