prot_D-dudresnayi_contig10211.247.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig10211.247.1
Unique Nameprot_D-dudresnayi_contig10211.247.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length210
Homology
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A6H5JUC6_9PHAE (TOPEUc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC6_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 9.230e-111
Identity = 167/203 (82.27%), Postives = 178/203 (87.68%), Query Frame = 0
Query:    8 PRKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLAEQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALNCA 210
            P+K K++TR EKI +AM VY WWEEPAH PGKQWDSLEH GA FA EYKPHG+KLKYDGK+V LT QQEEVATFYASMPL+GPQLAEQG VFNKNFFTDFK VLGKGH IKDFKLLDFSAIRAHL+  KQIKRAATDGEKA AKT KEEL HKYSYAIVD HLEK+GNYNVEPP LFRGRG+HPKTG LKARV   DIA+NCA
Sbjct:  387 PKKPKKLTRAEKIEKAMKVYMWWEEPAHEPGKQWDSLEHNGAHFAPEYKPHGVKLKYDGKEVNLTTQQEEVATFYASMPLDGPQLAEQGKVFNKNFFTDFKAVLGKGHFIKDFKLLDFSAIRAHLDITKQIKRAATDGEKAAAKTVKEELVHKYSYAIVDGHLEKVGNYNVEPPGLFRGRGEHPKTGKLKARVTASDIAINCA 589          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: D7G042_ECTSI (TOPEUc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G042_ECTSI)

HSP 1 Score: 346 bits (888), Expect = 4.460e-109
Identity = 168/204 (82.35%), Postives = 178/204 (87.25%), Query Frame = 0
Query:    8 PRKFKEMT-RTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLAEQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALNCA 210
            P+ FKEMT R EKI +AM VY WWEEPAH PGKQWDSLEH GA FA EYKPHG+KLKYDGK+V+LT QQEEVATFYASMPL+GPQLAEQG VFNKNFFTDFK VLGKGH IKDFKLLDFSAIRAHL+  KQIK AATDGEKA AKT KEEL HKYSYAIVD HLEK+GNYNVEPP LFRGRG+HPKTG LKARV   DIA+NCA
Sbjct:  334 PKGFKEMTTRAEKIEKAMKVYMWWEEPAHEPGKQWDSLEHNGAHFAPEYKPHGVKLKYDGKEVHLTTQQEEVATFYASMPLDGPQLAEQGKVFNKNFFTDFKAVLGKGHVIKDFKLLDFSAIRAHLDITKQIKLAATDGEKAAAKTVKEELVHKYSYAIVDGHLEKVGNYNVEPPGLFRGRGEHPKTGKLKARVTASDIAINCA 537          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A7S2WTQ7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTQ7_9STRA)

HSP 1 Score: 229 bits (584), Expect = 3.210e-67
Identity = 116/213 (54.46%), Postives = 141/213 (66.20%), Query Frame = 0
Query:    1 GASGETKPR---KFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLA--EQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 208
            GA    KP    K K+ T+ E++ QAM  YKWWE      G+QW +LEH G  F  EYKPHG+ LKY+GKD+ L P  EE+ATFY  +P +GPQL   E   +F KNFFTDFK  LG  H+IK F+  DFSAIR H+E  + IK+AAT+ EK  AK  K+ L  KY YA+VD HLEKIGN   EPPSLFRGRGKHP  G +K RV+P  + +N
Sbjct:  128 GARKAAKPEAMGKLKKFTKVERLDQAMKSYKWWEHEDLPAGQQWRTLEHNGLCFPPEYKPHGVALKYEGKDLVLPPDLEELATFYGLVPDDGPQLGDPETRPIFQKNFFTDFKKALGGEHEIKKFQGCDFSAIREHIEKERLIKKAATEVEKQAAKEEKQSLQFKYGYALVDGHLEKIGNTMAEPPSLFRGRGKHPLMGKVKQRVLPEQVTIN 340          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A7S2MAS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MAS9_9STRA)

HSP 1 Score: 216 bits (551), Expect = 3.430e-66
Identity = 100/200 (50.00%), Postives = 134/200 (67.00%), Query Frame = 0
Query:   11 FKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQL--AEQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 208
             K++ ++E+I+ AM  Y WW       G+QW  +EH G  F   Y+PHG+K++YDGK+V LTP +EE ATF+A+M  +G  L  ++   +F KNFFTDFK +LGK H IKDFK  DF+ I AHL+  K +++A TD E+   K  K+    K+ YA+VD HLEK+GNYN+EPP  FRGRG+HPK G LK RV P  + LN
Sbjct:  120 LKQLDKSERISHAMQAYLWWNADDPPKGQQWCKMEHAGVSFPEGYEPHGVKMRYDGKEVDLTPVEEEAATFFAAMDPDGMHLGNSKTAPIFKKNFFTDFKAILGKNHVIKDFKKCDFTPITAHLDEQKIVRKAITDAERKQNKNVKDTAMFKFGYALVDGHLEKVGNYNMEPPGAFRGRGEHPKMGKLKQRVDPEQVMLN 319          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: F0YL16_AURAN (TOPEUc domain-containing protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL16_AURAN)

HSP 1 Score: 221 bits (564), Expect = 3.070e-65
Identity = 107/212 (50.47%), Postives = 140/212 (66.04%), Query Frame = 0
Query:    1 GASGETKPRKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLAEQGA---VFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALNC 209
            G+ GE    K K+M   E   Q +  ++WW  P    GK W +LEH G  F  +YKPHGI + YDG  + LTP QEE+ATFYA+MP +GPQL   G    +F +NF+ D+  VLGK H IK F   DFS I  HL+  K +KRAA+D EK VA+  +++   +  YAI+DDHLEK+GN+ +EPPSLFRGRGKHPKTG++K RV P  +++NC
Sbjct:   51 GSDGEISAMKRKKMKSAE---QGIAAFEWWNSPDPPEGKAWQTLEHCGMTFEPQYKPHGIAMVYDGVPISLTPYQEELATFYAAMPEDGPQLNVSGGQREIFQRNFWDDWHKVLGKSHAIKSFDKCDFSDISKHLDRLKFVKRAASDAEKVVARELRDDCQLRSGYAILDDHLEKVGNFRMEPPSLFRGRGKHPKTGVVKLRVEPDQVSINC 259          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A836C9X0_9STRA (DNA topoisomerase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X0_9STRA)

HSP 1 Score: 222 bits (566), Expect = 3.690e-65
Identity = 102/189 (53.97%), Postives = 134/189 (70.90%), Query Frame = 0
Query:   24 MTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLAEQGA--VFNKNFFTDFKTVLGKGHKIKDFKL--LDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 208
            +  YKWWEEP  APG+QW  LEH G  F  EY+PHG+ L YDG+++ L+P+ EE+ATF+A +PL+GPQL +     VF+ NFF+D+K  +  GH +K+ K    DF A+RAHL+  + IK+AATDGE+A AK  KE   H +  AIVD HLEK+GN+ +EPP LFRGRGKHPKTG LK R  P ++ +N
Sbjct:   53 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVN 241          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A485L6E4_9STRA (DNA topoisomerase I n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L6E4_9STRA)

HSP 1 Score: 221 bits (564), Expect = 6.760e-65
Identity = 104/202 (51.49%), Postives = 136/202 (67.33%), Query Frame = 0
Query:    9 RKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLA--EQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 208
            RK K  +++E++  A+  Y+WW       G QW SLEH G LF S Y+PHG+ L Y+GK V LTP QEE+A+F+A+MPL+GPQL   +   +F KNFF DFK+ LGKGH IKD K  DF  IR HL   + +K+  T  EKA  K  K+E   ++ +AIVD HLEK+GN+ +EPP LFRGRG+HPKTG LK  V P ++ +N
Sbjct:   97 RKLKVQSKSERLDMAIKSYRWWNADELPEGIQWRSLEHNGVLFPSVYEPHGVPLLYEGKPVDLTPAQEEIASFFAAMPLDGPQLGNPKTADMFTKNFFADFKSALGKGHAIKDIKKCDFEKIRTHLNELRDVKKERTKEEKAPEKAKKDEELFRHGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKKAVQPGEVTIN 298          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A7S3PD47_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD47_9STRA)

HSP 1 Score: 219 bits (558), Expect = 1.210e-63
Identity = 99/204 (48.53%), Postives = 138/204 (67.65%), Query Frame = 0
Query:    9 RKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLA--EQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALNCA 210
            R+ K++ +T+++  AM  + WWE P  A G  W ++EH+G  F  EY+PHG+K+ YDG+ V LTP QEE ATF+A+M  +G  L   +   +F KNFF DF+ +LGK H IKDFK  DF  IR HL   K I++A +D E+   K  + +  HKY YA+VD H+E++GN+N+EPP  FRGRG+HPK G LK+RV P  ++LNC+
Sbjct:   95 RQLKKLDKTDRLQYAMQAFLWWEAPVLAEGMNWSTMEHSGVSFPEEYEPHGVKMLYDGQPVDLTPAQEEAATFFAAMDPDGMHLGNPKTAPIFIKNFFADFREILGKKHIIKDFKKCDFEPIRKHLNEQKIIRKAISDKERQANKEDRNQTLHKYGYAVVDGHIERVGNFNMEPPGAFRGRGEHPKMGKLKSRVSPEQVSLNCS 298          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A6G0WXZ6_9STRA (TOPEUc domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXZ6_9STRA)

HSP 1 Score: 216 bits (550), Expect = 4.690e-63
Identity = 104/202 (51.49%), Postives = 131/202 (64.85%), Query Frame = 0
Query:    9 RKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLA--EQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 208
            RK K   ++E++  A+  Y+WW       G QW SLEH G LF   Y PHGI L YDG+   LTP+QEE+A+F+AS+PL+GPQL   +  A+F KNFF DFK  LGK H IKD K  DF  IR HL T +  ++  T  EKA  K  K E    + +AIVD HLEK+GN+ +EPP LFRGRG+HPKTG LK  VMP ++ +N
Sbjct:   83 RKLKVQNKSERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVLFPPTYVPHGIPLLYDGQPAELTPEQEEIASFFASIPLDGPQLGNPKTAAMFTKNFFADFKASLGKNHVIKDIKKCDFEKIRTHLNTLRDERKERTKEEKAPEKAKKNEELFHHGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKKAVMPEEVTIN 284          
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A024UDN4_9STRA (DNA topoisomerase I n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UDN4_9STRA)

HSP 1 Score: 216 bits (549), Expect = 1.130e-62
Identity = 102/202 (50.50%), Postives = 134/202 (66.34%), Query Frame = 0
Query:    9 RKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLA--EQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 208
            RK K   ++E++  A+  Y+WW       G QW SLEH G LF   Y+PHGI L YDG  V LTP+QEE+A+F+A+MP +GPQL   +  A+F KNFF DF+  LGK H IKD K  +F  I+AHL   +  K+  T  EKA  K  K+E  +++ +AIVD HLEK+GN+ +EPP LFRGRG+HPKTG LK  VMP ++ +N
Sbjct:  105 RKLKVQNKSERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVLFPPSYEPHGIPLIYDGVPVTLTPEQEEIASFFAAMPADGPQLGNPKTAAMFTKNFFADFRASLGKNHVIKDIKKCNFERIQAHLNEIRDAKKERTKEEKAPEKAKKDEELYRHGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKKAVMPEEVTIN 306          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JUC6_9PHAE9.230e-11182.27TOPEUc domain-containing protein n=1 Tax=Ectocarpu... [more]
D7G042_ECTSI4.460e-10982.35TOPEUc domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A7S2WTQ7_9STRA3.210e-6754.46Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2MAS9_9STRA3.430e-6650.00Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
F0YL16_AURAN3.070e-6550.47TOPEUc domain-containing protein n=2 Tax=Aureococc... [more]
A0A836C9X0_9STRA3.690e-6553.97DNA topoisomerase I n=1 Tax=Tribonema minus TaxID=... [more]
A0A485L6E4_9STRA6.760e-6551.49DNA topoisomerase I n=1 Tax=Aphanomyces stellatus ... [more]
A0A7S3PD47_9STRA1.210e-6348.53Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A6G0WXZ6_9STRA4.690e-6351.49TOPEUc domain-containing protein n=1 Tax=Aphanomyc... [more]
A0A024UDN4_9STRA1.130e-6250.50DNA topoisomerase I n=2 Tax=Aphanomyces invadans T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013030DNA topoisomerase I, DNA binding, N-terminal domain 2GENE3D2.170.11.10coord: 28..209
e-value: 3.5E-64
score: 218.3
IPR008336DNA topoisomerase I, DNA binding, eukaryotic-typePFAMPF02919Topoisom_I_Ncoord: 40..210
e-value: 1.6E-62
score: 210.8
IPR013034DNA topoisomerase I, DNA binding, N-terminal domain 1GENE3D1.10.10.41coord: 56..142
e-value: 3.5E-64
score: 218.3
NoneNo IPR availablePANTHERPTHR10290:SF3DNA TOPOISOMERASE 1coord: 10..209
NoneNo IPR availablePANTHERPTHR10290DNA TOPOISOMERASE Icoord: 10..209
IPR036202DNA topoisomerase I, DNA binding, eukaryotic-type, N-terminal domain superfamilySUPERFAMILY56741Eukaryotic DNA topoisomerase I, N-terminal DNA-binding fragmentcoord: 26..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10211contigD-dudresnayi_contig10211:4470..6763 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10211.247.1mRNA_D-dudresnayi_contig10211.247.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig10211 4469..6763 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig10211.247.1 ID=prot_D-dudresnayi_contig10211.247.1|Name=mRNA_D-dudresnayi_contig10211.247.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=210bp
GASGETKPRKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGAL
FASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLAEQGAVFN
KNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVA
KTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARV
MPCDIALNCA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013030DNA_topo_DNA_db_N_dom2
IPR008336TopoI_DNA-bd_euk
IPR013034DNA_topo_DNA_db_N_dom1
IPR036202TopoI_DNA-bd_euk_N_sf