prot_D-dudresnayi_contig9975.28786.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9975.28786.1
Unique Nameprot_D-dudresnayi_contig9975.28786.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length154
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig9975.28786.1 vs. uniprot
Match: A0A6H5KU31_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU31_9PHAE)

HSP 1 Score: 124 bits (311), Expect = 5.140e-30
Identity = 76/179 (42.46%), Postives = 95/179 (53.07%), Query Frame = 0 
Query:    1 GLDALEAAGLRRGRPAVVDNFKPTYLDDECEKDKENG------------------------RHAASLAPSPPSSLISPVGSPGELDAMGEVRLESNGFVGNGVARGTTGVGGDKDGTVGSLLWRLLSERFPQYVNKGLEDEPLL--QGKFPTLGFKKENPNETRSFYRRAEQGIRIRGS 153
            GL+ALE+AGLRRGR AV+D FKPTY+D+E E                              +    L  +PPSS   P  +PG+                             ++G   SLLWR+LS++FP Y+N+GLED  +    GKFPT+GFKKENPNE+RS YRRAEQGIRIRGS
Sbjct: 1711 GLEALESAGLRRGRSAVIDQFKPTYIDEEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQQQVHPLPSAPPSSPTDPSATPGKAG---------------------------EEGYGCSLLWRILSDKFPHYINQGLEDTQVQVPNGKFPTIGFKKENPNESRSNYRRAEQGIRIRGS 1862
[Close]
BLAST of mRNA_D-dudresnayi_contig9975.28786.1 vs. uniprot
Match: D8LHL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHL1_ECTSI)

HSP 1 Score: 94.0 bits (232), Expect = 3.150e-21
Identity = 45/60 (75.00%), Postives = 52/60 (86.67%), Query Frame = 0 
Query:   96 SLLWRLLSERFPQYVNKGLEDEPLL--QGKFPTLGFKKENPNETRSFYRRAEQGIRIRGS 153
            SLLWR+LSE+FP Y+N+GLED  +    GKFPT+GFKKENPNE+RS YRRAEQGIRIRGS
Sbjct:  123 SLLWRILSEKFPHYINQGLEDTQVQVPNGKFPTIGFKKENPNESRSNYRRAEQGIRIRGS 182
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9975.28786.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KU31_9PHAE5.140e-3042.46USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LHL1_ECTSI3.150e-2175.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9975contigD-dudresnayi_contig9975:973..3698 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9975.28786.1mRNA_D-dudresnayi_contig9975.28786.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9975 973..3804 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9975.28786.1 ID=prot_D-dudresnayi_contig9975.28786.1|Name=mRNA_D-dudresnayi_contig9975.28786.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=154bp
GLDALEAAGLRRGRPAVVDNFKPTYLDDECEKDKENGRHAASLAPSPPSS
LISPVGSPGELDAMGEVRLESNGFVGNGVARGTTGVGGDKDGTVGSLLWR
LLSERFPQYVNKGLEDEPLLQGKFPTLGFKKENPNETRSFYRRAEQGIRI
RGS*
back to top