prot_D-dudresnayi_contig9948.28758.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9948.28758.1
Unique Nameprot_D-dudresnayi_contig9948.28758.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length566
Homology
BLAST of mRNA_D-dudresnayi_contig9948.28758.1 vs. uniprot
Match: A0A6H5KSP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSP5_9PHAE)

HSP 1 Score: 253 bits (647), Expect = 2.960e-69
Identity = 213/522 (40.80%), Postives = 252/522 (48.28%), Query Frame = 0
Query:    8 GLEKALELATRCVHADVFNSKAYALRGELQARLGRRDRAIADYEAAALLERTDPRPRIN--------------------------------QGVMHLYTSRPGLARLNFDVMERTCKEPTEGALAAFNLGVAAATTGDLLVAEAAFTRALSALTVASPRGK-QKLVTPAACLANRGLVRFAMKSFHGAVIDLGGT------APTVDGGSECSSEPSSPAVGKVDGDG---GGGALDTVDVALGRALAESRLQNKATREAAGLRLRRMLRSTTPLLACEVVAARLGLGNLAATYGGTVRNSAA-QPDAAAENRVAVTGQKSATEGPQFLRGTPAGRWTIDEDDDALTGGERALRHFLHAIHSCPTASAAWLNASE-------------------------------------------------ALEMIADQGQDTSPRSFNGYRSMRSASPS----STP---------HCVSPGRVA--SLALLDAVLAMAPRHAAALRSRATILMVVGRSWEALSQADEAV 422
            GL  ALEL +RC+  D FN+KAY+LR EL+ARLGRRDRAIADY+AAA LE  DPR RIN                                +GV+HL  SR G A + FD +ER      E  LAAFNLGVAAAT G                          KL+TPAACLANRGLVRFAM+ F GA  DLGG       APT+ GG+  S     PA     G G    GGALDT+D  +GRALA+ RL N+ +REAA  RLR++LRST  LLACEV + R+GLGNLAAT G   +      P  A E+  A     +A  G                       G RALR+F HAIH+CPTASAAWLNASE                                                 ALE   + G +T+  SF G    ++  P     S P         H  +   +   SL LLD+VLAMAP H AA+R RAT L  + R  EAL  AD+AV
Sbjct: 1612 GLNGALELVSRCLGTDGFNAKAYSLRAELEARLGRRDRAIADYKAAASLEVGDPRSRINMVGTDVFDVPHRQFSSAVRRKPSPIEERGMCVKGVVHLNASRSGTASIEFDALERESTGSVERVLAAFNLGVAAATAGXXXXXXXXXXXXXXXXXXXXXXXXVTKLITPAACLANRGLVRFAMQRFRGAAEDLGGASLKSFKAPTI-GGANTSDSGVVPAAAGTPGSGMTLAGGALDTLDCEIGRALADGRLDNRVSREAARNRLRKLLRSTR-LLACEVASIRVGLGNLAATSGEVCQVGLGYSPVQAGESNAATCASFAAEHG----------------------SGARALRNFQHAIHACPTASAAWLNASEQRWSCTLNGKYCIPNPVRAGLGFQQYLTNSTSWPCLLSLIFNLYRDMIKALETAVEHGDETTS-SFAGKSKNQNREPQPEKGSAPVAGVVPAAGHTPTKAAIIYPSLILLDSVLAMAPTHHAAMRCRATTLARLRRMPEALDAADQAV 2108          
BLAST of mRNA_D-dudresnayi_contig9948.28758.1 vs. uniprot
Match: D7G3I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I2_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 5.650e-50
Identity = 203/575 (35.30%), Postives = 241/575 (41.91%), Query Frame = 0
Query:   29 AYALRGELQARLGRRDRAIADYEAAALLERTDPRPRINQGVMHLYTSRPGLARLNFDVMERTCKEPTEGALAAFNLGVAAATTGDLLVAEAAFTRALSALTVASPRGKQKLVTPAACL-ANRGLVRFAMKSFHGAVIDLGGT------APTVDGGSECSSEPSSPAVGKVDGDG----GGGALDTVDVALGRALAESRLQNKATREAAGLRLRRMLRSTTPLLACEVVAARLGLGNLAATYGGTVRNSAA-QPDAAAENRVAVTGQKSATEGPQFLRGTPAGRWTIDEDDDALTGGERALRHFLHAIHSCPTASAAWLNASEALEMIADQGQDTSPRSFNGYRSMRSASPSSTPHCVSPGRVASLALLDAVLAMAPRHAAALRSRATILMVVGRSWEALSQADEAVSAXXXAID---LSGGCLGTGGXGGRGVIAXXXXXXXXXXXXXXXXXTQTTFGYIREVASMPSTTGVGASAEIGRC----------------------CPSRSIGFMPQSKVTVAVEGGLLRTGGGXXGEGGWPEATFDMVKALILRGCLRQKMSRRKPAANDYRRALDI 566
            AY LR EL+ARLGRRDRAIADY+AAA LE  DPR RIN GV+HL  SR G A + FD +ER      +  LAAFNLGVAAAT G+L                                 ANRGLVRFAM+ F GA  DLGG       APT+ GG+  S     PA     G G     GGALDT+D  +GRALA+ RL N+A+REAA  RLR++LRS   LLACE  + R+GLGNLAAT G   +      P  A E+ V  T    A E       T AG+      +     G   +   + A H      AA L+ S                                           L LLD+VLAMAP H AA+R RAT L  +GR  EAL  AD+A   XXX      L                                     T  +   VAS+     +G ++                               SIGFM                  G           FD+ K+L+LRGCLRQK S    A  DYRRAL I
Sbjct:  502 AYNLRAELEARLGRRDRAIADYKAAASLEVADPRSRINMGVVHLNASRSGAASIEFDALERESTGSIDRVLAAFNLGVAAATAGELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRGLVRFAMQRFRGAAEDLGGASLRSFKAPTI-GGANASDSGVVPAATGTSGSGMTALAGGALDTLDCEIGRALADGRLDNRASREAARNRLRKLLRSAR-LLACEAASIRVGLGNLAATSGEVCQVGLGYSPAQAGESNVLET----AVEHGDETTSTFAGKSDNQNREPQPEKGSAPVAGAVPAGHKPTPTKAAILSPS-------------------------------------------LILLDSVLAMAPTHHAAMRCRATTLARLGRMPEALDAADQAXXXXXXXXXXXKLKHRDAALASASTERTRGDDNALPQPSPPATARNKHAGTRNHTHCVASVSMAANMGHTSTTXXXXXXXXXXXXXXXXXXXXXXXPFAARTSIGFMRSXXXXXXXXXXXXXXXXGRTD-------AFDLAKSLVLRGCLRQKTSWWNQAEQDYRRALQI 1020          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9948.28758.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KSP5_9PHAE2.960e-6940.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G3I2_ECTSI5.650e-5035.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 27..60
e-value: 0.027
score: 23.6
coord: 402..435
e-value: 250.0
score: 2.7
IPR019734Tetratricopeptide repeatPFAMPF13181TPR_8coord: 28..58
e-value: 0.031
score: 14.5
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 6..166
e-value: 2.4E-14
score: 54.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 9..127
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 313..566
NoneNo IPR availablePANTHERPTHR44858:SF1TETRATRICOPEPTIDE REPEAT PROTEIN 6coord: 9..564
NoneNo IPR availablePANTHERPTHR44858FAMILY NOT NAMEDcoord: 9..564

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9948contigD-dudresnayi_contig9948:3370..7698 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9948.28758.1mRNA_D-dudresnayi_contig9948.28758.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9948 3370..7698 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9948.28758.1 ID=prot_D-dudresnayi_contig9948.28758.1|Name=mRNA_D-dudresnayi_contig9948.28758.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=566bp
RRRHGSSGLEKALELATRCVHADVFNSKAYALRGELQARLGRRDRAIADY
EAAALLERTDPRPRINQGVMHLYTSRPGLARLNFDVMERTCKEPTEGALA
AFNLGVAAATTGDLLVAEAAFTRALSALTVASPRGKQKLVTPAACLANRG
LVRFAMKSFHGAVIDLGGTAPTVDGGSECSSEPSSPAVGKVDGDGGGGAL
DTVDVALGRALAESRLQNKATREAAGLRLRRMLRSTTPLLACEVVAARLG
LGNLAATYGGTVRNSAAQPDAAAENRVAVTGQKSATEGPQFLRGTPAGRW
TIDEDDDALTGGERALRHFLHAIHSCPTASAAWLNASEALEMIADQGQDT
SPRSFNGYRSMRSASPSSTPHCVSPGRVASLALLDAVLAMAPRHAAALRS
RATILMVVGRSWEALSQADEAVSAAGEAIDLSGGCLGTGGGGGRGVIASE
KNVPPPPFSSSSSSSTQTTFGYIREVASMPSTTGVGASAEIGRCCPSRSI
GFMPQSKVTVAVEGGLLRTGGGGGGEGGWPEATFDMVKALILRGCLRQKM
SRRKPAANDYRRALDI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf