mRNA_D-dudresnayi_contig9948.28758.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
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Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9948.28758.1 vs. uniprot
Match: A0A6H5KSP5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSP5_9PHAE) HSP 1 Score: 253 bits (647), Expect = 2.960e-69 Identity = 213/522 (40.80%), Postives = 252/522 (48.28%), Query Frame = 1
Query: 22 GLEKALELATRCVHADVFNSKAYALRGELQARLGRRDRAIADYEAAALLERTDPRPRIN--------------------------------QGVMHLYTSRPGLARLNFDVMERTCKEPTEGALAAFNLGVAAATTGDLLVAEAAFTRALSALTVASPRGK-QKLVTPAACLANRGLVRFAMKSFHGAVIDLGGT------APTVDGGSECSSEPSSPAVGKVDGDG---GGGALDTVDVALGRALAESRLQNKATREAAGLRLRRMLRSTTPLLACEVVAARLGLGNLAATYGGTVRNSAA-QPDAAAENRVAVTGQKSATEGPQFLRGTPAGRWTIDEDDDALTGGERALRHFLHAIHSCPTASAAWLNASE-------------------------------------------------ALEMIADQGQDTSPRSFNGYRSMRSASPS----STP---------HCVSPGRVA--SLALLDAVLAMAPRHAAALRSRATILMVVGRSWEALSQADEAV 1266
GL ALEL +RC+ D FN+KAY+LR EL+ARLGRRDRAIADY+AAA LE DPR RIN +GV+HL SR G A + FD +ER E LAAFNLGVAAAT G KL+TPAACLANRGLVRFAM+ F GA DLGG APT+ GG+ S PA G G GGALDT+D +GRALA+ RL N+ +REAA RLR++LRST LLACEV + R+GLGNLAAT G + P A E+ A +A G G RALR+F HAIH+CPTASAAWLNASE ALE + G +T+ SF G ++ P S P H + + SL LLD+VLAMAP H AA+R RAT L + R EAL AD+AV
Sbjct: 1612 GLNGALELVSRCLGTDGFNAKAYSLRAELEARLGRRDRAIADYKAAASLEVGDPRSRINMVGTDVFDVPHRQFSSAVRRKPSPIEERGMCVKGVVHLNASRSGTASIEFDALERESTGSVERVLAAFNLGVAAATAGXXXXXXXXXXXXXXXXXXXXXXXXVTKLITPAACLANRGLVRFAMQRFRGAAEDLGGASLKSFKAPTI-GGANTSDSGVVPAAAGTPGSGMTLAGGALDTLDCEIGRALADGRLDNRVSREAARNRLRKLLRSTR-LLACEVASIRVGLGNLAATSGEVCQVGLGYSPVQAGESNAATCASFAAEHG----------------------SGARALRNFQHAIHACPTASAAWLNASEQRWSCTLNGKYCIPNPVRAGLGFQQYLTNSTSWPCLLSLIFNLYRDMIKALETAVEHGDETTS-SFAGKSKNQNREPQPEKGSAPVAGVVPAAGHTPTKAAIIYPSLILLDSVLAMAPTHHAAMRCRATTLARLRRMPEALDAADQAV 2108
BLAST of mRNA_D-dudresnayi_contig9948.28758.1 vs. uniprot
Match: D7G3I2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I2_ECTSI) HSP 1 Score: 196 bits (499), Expect = 5.650e-50 Identity = 203/575 (35.30%), Postives = 241/575 (41.91%), Query Frame = 1
Query: 85 AYALRGELQARLGRRDRAIADYEAAALLERTDPRPRINQGVMHLYTSRPGLARLNFDVMERTCKEPTEGALAAFNLGVAAATTGDLLVAEAAFTRALSALTVASPRGKQKLVTPAACL-ANRGLVRFAMKSFHGAVIDLGGT------APTVDGGSECSSEPSSPAVGKVDGDG----GGGALDTVDVALGRALAESRLQNKATREAAGLRLRRMLRSTTPLLACEVVAARLGLGNLAATYGGTVRNSAA-QPDAAAENRVAVTGQKSATEGPQFLRGTPAGRWTIDEDDDALTGGERALRHFLHAIHSCPTASAAWLNASEALEMIADQGQDTSPRSFNGYRSMRSASPSSTPHCVSPGRVASLALLDAVLAMAPRHAAALRSRATILMVVGRSWEALSQADEAVSAXXXAID---LSGGCLGTGGXGGRGVIAXXXXXXXXXXXXXXXXXTQTTFGYIREVASMPSTTGVGASAEIGRC----------------------CPSRSIGFMPQSKVTVAVEGGLLRTGGGXXGEGGWPEATFDMVKALILRGCLRQKMSRRKPAANDYRRALDI 1698
AY LR EL+ARLGRRDRAIADY+AAA LE DPR RIN GV+HL SR G A + FD +ER + LAAFNLGVAAAT G+L ANRGLVRFAM+ F GA DLGG APT+ GG+ S PA G G GGALDT+D +GRALA+ RL N+A+REAA RLR++LRS LLACE + R+GLGNLAAT G + P A E+ V T A E T AG+ + G + + A H AA L+ S L LLD+VLAMAP H AA+R RAT L +GR EAL AD+A XXX L T + VAS+ +G ++ SIGFM G FD+ K+L+LRGCLRQK S A DYRRAL I
Sbjct: 502 AYNLRAELEARLGRRDRAIADYKAAASLEVADPRSRINMGVVHLNASRSGAASIEFDALERESTGSIDRVLAAFNLGVAAATAGELXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANRGLVRFAMQRFRGAAEDLGGASLRSFKAPTI-GGANASDSGVVPAATGTSGSGMTALAGGALDTLDCEIGRALADGRLDNRASREAARNRLRKLLRSAR-LLACEAASIRVGLGNLAATSGEVCQVGLGYSPAQAGESNVLET----AVEHGDETTSTFAGKSDNQNREPQPEKGSAPVAGAVPAGHKPTPTKAAILSPS-------------------------------------------LILLDSVLAMAPTHHAAMRCRATTLARLGRMPEALDAADQAXXXXXXXXXXXKLKHRDAALASASTERTRGDDNALPQPSPPATARNKHAGTRNHTHCVASVSMAANMGHTSTTXXXXXXXXXXXXXXXXXXXXXXXPFAARTSIGFMRSXXXXXXXXXXXXXXXXGRTD-------AFDLAKSLVLRGCLRQKTSWWNQAEQDYRRALQI 1020 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9948.28758.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9948.28758.1 >prot_D-dudresnayi_contig9948.28758.1 ID=prot_D-dudresnayi_contig9948.28758.1|Name=mRNA_D-dudresnayi_contig9948.28758.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=566bp RRRHGSSGLEKALELATRCVHADVFNSKAYALRGELQARLGRRDRAIADYback to top mRNA from alignment at D-dudresnayi_contig9948:3370..7698- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9948.28758.1 ID=mRNA_D-dudresnayi_contig9948.28758.1|Name=mRNA_D-dudresnayi_contig9948.28758.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=4329bp|location=Sequence derived from alignment at D-dudresnayi_contig9948:3370..7698- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9948:3370..7698- >mRNA_D-dudresnayi_contig9948.28758.1 ID=mRNA_D-dudresnayi_contig9948.28758.1|Name=mRNA_D-dudresnayi_contig9948.28758.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=3396bp|location=Sequence derived from alignment at D-dudresnayi_contig9948:3370..7698- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |