prot_D-dudresnayi_contig9868.28679.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9868.28679.1
Unique Nameprot_D-dudresnayi_contig9868.28679.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length60
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig9868.28679.1 vs. uniprot
Match: A0A6H5L508_9PHAE (BTB domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L508_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 1.770e-6
Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = 0 
Query:    1 MSLYAWGKNTHGQLGVKQDPWPSPGARDAKYRTQQ---QQQQSTHGAKLPRLGTKE-GQGHKPV 60
            MSLYAWGKN +GQLGVKQ+P  S  +R    + QQ   QQ Q  +  + P+LG++  GQG +PV
Sbjct:    1 MSLYAWGKNNYGQLGVKQEPARSNPSRHQPRQGQQEEEQQVQPVNARRPPKLGSERAGQGQEPV 64
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9868.28679.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L508_9PHAE1.770e-650.00BTB domain-containing protein n=2 Tax=Ectocarpus T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000408Regulator of chromosome condensation, RCC1PFAMPF00415RCC1coord: 3..19
e-value: 2.4E-5
score: 24.9

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9868contigD-dudresnayi_contig9868:3147..3798 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9868.28679.1mRNA_D-dudresnayi_contig9868.28679.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9868 3147..4019 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9868.28679.1 ID=prot_D-dudresnayi_contig9868.28679.1|Name=mRNA_D-dudresnayi_contig9868.28679.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=60bp
MSLYAWGKNTHGQLGVKQDPWPSPGARDAKYRTQQQQQQSTHGAKLPRLG
TKEGQGHKPV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000408Reg_chr_condens