prot_D-dudresnayi_contig9818.28620.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig9818.28620.1
Unique Nameprot_D-dudresnayi_contig9818.28620.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length240
Homology
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BLAST of mRNA_D-dudresnayi_contig9818.28620.1 vs. uniprot
Match: D8LTL8_ECTSI (TRUD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTL8_ECTSI)

HSP 1 Score: 74.3 bits (181), Expect = 1.410e-11
Identity = 36/46 (78.26%), Postives = 40/46 (86.96%), Query Frame = 0 
Query:  195 VRIPAGCGPDKEARARVHRAVQETFPFVKTTTERDPDGSVTVVCSQ 240
            V + AG G DK ARARVHRAVQETFPF+KTTTE+ PDGSVTVVC+Q
Sbjct:  200 VWVHAGQGADKAARARVHRAVQETFPFIKTTTEKAPDGSVTVVCTQ 245
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9818.28620.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTL8_ECTSI1.410e-1178.26TRUD domain-containing protein n=2 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 133..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9818contigD-dudresnayi_contig9818:3878..5714 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9818.28620.1mRNA_D-dudresnayi_contig9818.28620.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig9818 3878..5714 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig9818.28620.1 ID=prot_D-dudresnayi_contig9818.28620.1|Name=mRNA_D-dudresnayi_contig9818.28620.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=240bp
MLTAFSCFASGTGDACAAGAGVVAGDGAGANAVAVTGAGSGSGAGSGRVS
AGASSACGPGAGSGSSSASGAGAGAGIAAGAASRGGDNSISIFTPERGEA
NASKKRGIEVVGDNNAIRGGGGEKSAVGTTTTINRLDTALADEKKNAAQE
ETRDNNNSSSICNGGKSKGGRGAGGILARTGSNEGLANGGAGLAVRIPAG
CGPDKEARARVHRAVQETFPFVKTTTERDPDGSVTVVCSQ
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