prot_D-dudresnayi_contig968.28467.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig968.28467.1
Unique Nameprot_D-dudresnayi_contig968.28467.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length248
Homology
BLAST of mRNA_D-dudresnayi_contig968.28467.1 vs. uniprot
Match: D7FI75_ECTSI (Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI75_ECTSI)

HSP 1 Score: 193 bits (490), Expect = 4.590e-57
Identity = 119/263 (45.25%), Postives = 143/263 (54.37%), Query Frame = 0
Query:    3 RLWINPFKSAVPLLGDYDINVVLLALKLKECRVSVHVVFNPKDPSAFELALEQAALEDPSVRGVIVNFVCRTLMWGPWVSHHFYAIVKGPVTLGPSSNADA------------------------ETRGNATAAEVAGAKQGAGEGGGVDSVTPTCLGRATTPSAPLADKSHRPSTDTTGGSGGNPTATQDDESGGSSGEAVGSKTGTHEWYSLDSRLPKPKRLGGAKGLMAHLAWEVREHHGHVFVVREGREE--GCNDDLD 239
            RL INP+KS +P++GDYDINVVL ALKL+ECRVS+HVVFN KDP+AFELAL +   +  ++RGVIVNFVCR+L+WG WV+HHFYAIVK     GP    D                         E  G                  G D     C  + +         S R   D  G +    ++ Q    G   G A G+      WYSLDSR+PKP+RLGG +GL+ HLAWEVREHHGHVFVV EG EE  G   D D
Sbjct:   52 RLLINPYKSVIPMVGDYDINVVLEALKLRECRVSLHVVFNAKDPTAFELALARVDWDSATIRGVIVNFVCRSLLWGSWVTHHFYAIVKAK---GPGDGDDGLSPGGXXXXXXXXXXXXXXXTRHLERVGXXXXXXXXXXXXXXXXXXGDDGEQTGCFEKLS--------PSRRRGKDNRGRTRNRTSSNQGSCCGSDGGGAGGTA-----WYSLDSRIPKPQRLGGTRGLVEHLAWEVREHHGHVFVVGEGAEEVAGVGHDSD 298          
BLAST of mRNA_D-dudresnayi_contig968.28467.1 vs. uniprot
Match: D8LDY3_ECTSI (Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDY3_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 1.140e-25
Identity = 50/92 (54.35%), Postives = 69/92 (75.00%), Query Frame = 0
Query:    1 MGRLWINPFKSAVPLLGDYDINVVLLALKLKECRVSVHVVFNPKDPSAFELALEQAALEDPS---VRGVIVNFVCRTLMWGPWVSHHFYAIV 89
            MGR+W+NP+KS VP +G YDIN +L ALKLK+C +S+H VFNPK+P+A   +LE     DPS   VRG++VN V ++L+ G + +HHFYAI+
Sbjct:    1 MGRMWVNPYKSVVPQVGYYDINCLLEALKLKKCHISLHAVFNPKEPNAVAKSLEHL---DPSLGGVRGIVVNRVSKSLLGGLYTTHHFYAII 89          
BLAST of mRNA_D-dudresnayi_contig968.28467.1 vs. uniprot
Match: A0A6H5K9J2_9PHAE (Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9J2_9PHAE)

HSP 1 Score: 106 bits (265), Expect = 2.010e-24
Identity = 50/92 (54.35%), Postives = 68/92 (73.91%), Query Frame = 0
Query:    1 MGRLWINPFKSAVPLLGDYDINVVLLALKLKECRVSVHVVFNPKDPSAFELALEQAALEDPS---VRGVIVNFVCRTLMWGPWVSHHFYAIV 89
            MGR+W+NP+KS VP +G YDIN +L AL LK+C VS+H VFNPK+P+A   +LE     DPS   VRG++VN V ++L+ G + +HHFYAI+
Sbjct:   55 MGRMWVNPYKSVVPQVGYYDINCLLEALNLKKCHVSLHAVFNPKEPNAVAKSLEHL---DPSLGGVRGIVVNRVSKSLLGGLYTTHHFYAII 143          
BLAST of mRNA_D-dudresnayi_contig968.28467.1 vs. uniprot
Match: A0A836CAV1_9STRA (Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAV1_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 9.370e-11
Identity = 35/90 (38.89%), Postives = 53/90 (58.89%), Query Frame = 0
Query:    1 MGRLWINPFKSAVPLLGDYDINVVLLALKLKECRVSVHVVFNPKDPSAFELALEQAALEDPSVRGVIVNFVCRTLMWGPWVSHHFYAIVK 90
            +  LW+NPFKSAVP LG YD++V++ AL+ +  RVS HV +NP  P      L +  LE     G+I+N    +++W P    H+ A+ +
Sbjct:   24 LSTLWVNPFKSAVPFLGYYDLSVLVEALQTRGVRVSAHVAWNPAHPDLCAQELTEVDLEH--CVGLIINCRDPSMVWRP---RHWLAVAR 108          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig968.28467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FI75_ECTSI4.590e-5745.25Ubiquitinyl hydrolase 1 n=2 Tax=Ectocarpus TaxID=2... [more]
D8LDY3_ECTSI1.140e-2554.35Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K9J2_9PHAE2.010e-2454.35Ubiquitinyl hydrolase 1 n=1 Tax=Ectocarpus sp. CCA... [more]
A0A836CAV1_9STRA9.370e-1138.89Ubiquitinyl hydrolase 1 n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006155Josephin domainSMARTSM01246Josephin_2coord: 2..229
e-value: 0.0027
score: -13.6
IPR006155Josephin domainPFAMPF02099Josephincoord: 17..227
e-value: 5.6E-7
score: 29.8
IPR040053Josephin-1/2PANTHERPTHR13291JOSEPHIN 1, 2coord: 5..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig968contigD-dudresnayi_contig968:8720..10026 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig968.28467.1mRNA_D-dudresnayi_contig968.28467.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig968 8687..11968 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig968.28467.1 ID=prot_D-dudresnayi_contig968.28467.1|Name=mRNA_D-dudresnayi_contig968.28467.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=248bp
MGRLWINPFKSAVPLLGDYDINVVLLALKLKECRVSVHVVFNPKDPSAFE
LALEQAALEDPSVRGVIVNFVCRTLMWGPWVSHHFYAIVKGPVTLGPSSN
ADAETRGNATAAEVAGAKQGAGEGGGVDSVTPTCLGRATTPSAPLADKSH
RPSTDTTGGSGGNPTATQDDESGGSSGEAVGSKTGTHEWYSLDSRLPKPK
RLGGAKGLMAHLAWEVREHHGHVFVVREGREEGCNDDLDLGKEATTV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006155Josephin
IPR040053JOSD1/2