prot_D-dudresnayi_contig10556.608.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig10556.608.1
Unique Nameprot_D-dudresnayi_contig10556.608.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length191
Homology
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: A0A6H5KKP9_9PHAE (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKP9_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 2.390e-103
Identity = 168/191 (87.96%), Postives = 179/191 (93.72%), Query Frame = 0
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFREDE 191
            ADAILALRLGRLTSMEEGKLKAEA++L+ TM RLEG+M ED+K++D IVEEL E K  HAVPRRTMIKP+EGEL EEDLLAND+SVVVVT AGYIKRMPLEEF+AQNRGTRGKAGAK+SSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVP GSRTAKGVPVPQVLPI GDEEIASVLAVDDFREDE
Sbjct:  585 ADAILALRLGRLTSMEEGKLKAEAEDLKATMERLEGVMNEDSKVMDIIVEELTEAKNKHAVPRRTMIKPDEGELQEEDLLANDSSVVVVTAAGYIKRMPLEEFTAQNRGTRGKAGAKMSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPVGSRTAKGVPVPQVLPIAGDEEIASVLAVDDFREDE 775          
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: A0A836CKD9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKD9_9STRA)

HSP 1 Score: 253 bits (645), Expect = 4.500e-76
Identity = 127/191 (66.49%), Postives = 155/191 (81.15%), Query Frame = 0
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFREDE 191
            ADA+LALRLGRLT  EE KLK E  +L   + RL GLM +D  +   +V+EL E K  HAVPRR++IK +EGELN+EDLLANDNS++V+T +GYIKRMPLEEF AQ RGTRGKAGAKLS   D V  FFTC+DH+T+LFVSD+GVAYG+RAFQVP+ SRTAKGVPVPQVLP+  DE I+SV+ V++F++DE
Sbjct:  407 ADAVLALRLGRLTKAEEIKLKKEHTDLTKEIKRLLGLMQDDESVRQVMVKELLELKAKHAVPRRSIIKKDEGELNDEDLLANDNSIIVITRSGYIKRMPLEEFQAQRRGTRGKAGAKLSDPGDEVAQFFTCRDHNTVLFVSDRGVAYGLRAFQVPTASRTAKGVPVPQVLPLSADERISSVIPVEEFKDDE 597          
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: A0A7S2XVV8_9STRA (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVV8_9STRA)

HSP 1 Score: 233 bits (595), Expect = 6.350e-74
Identity = 114/191 (59.69%), Postives = 152/191 (79.58%), Query Frame = 0
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFREDE 191
            A+AI+ LRL RLTSMEEGKLK+E KEL+ T+ RL+ LM +D ++ D ++EELKE K  HAVPRR+ I  E+GEL++EDLL+ND S++ +T  GYIKRMP++ F AQNRGTRGK+GAKL+ +  + Q    C DHDT+LFVS +G+AY +RAFQVP GSRTAKGVP+PQVLPI G++++ ++L V +F E+E
Sbjct:   70 AEAIVNLRLSRLTSMEEGKLKSEHKELEKTIRRLQDLMDQDEQVYDVMIEELKEIKNKHAVPRRSKILKEQGELSDEDLLSNDRSIITITNTGYIKRMPMDTFDAQNRGTRGKSGAKLTGEGRMEQ-VLACNDHDTLLFVSAEGIAYAVRAFQVPQGSRTAKGVPLPQVLPISGEDKVVAMLPVSEFSEEE 259          
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: W7TLA9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLA9_9STRA)

HSP 1 Score: 217 bits (552), Expect = 3.880e-62
Identity = 107/192 (55.73%), Postives = 147/192 (76.56%), Query Frame = 0
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAV-DDFREDE 191
            A AILAL LGRLT++E+ KL+AE ++L+G +   + +M +D K+ D + +EL+E +  HAVPRR+ I+   G L E DLLAND SV++VT AGYIKRMPL++F  Q RGTRGKAGA++S D D+V HFF C DHD ++F+S+KGVA+GIRAFQVP  SR +KGVP+PQVLP+  D+ ++SV+ + + F+ DE
Sbjct:  553 AQAILALTLGRLTALEDAKLRAEREQLRGQIEDFQAMMRQDEKVFDVMKQELREIRAKHAVPRRSSIRAHAGALTELDLLANDRSVMMVTEAGYIKRMPLDDFEQQRRGTRGKAGARMSQD-DLVNHFFACNDHDHVVFISEKGVAFGIRAFQVPVASRVSKGVPLPQVLPLSSDDHVSSVIPLGESFQADE 743          
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: A0A0G4ESH9_VITBC (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ESH9_VITBC)

HSP 1 Score: 209 bits (533), Expect = 1.370e-59
Identity = 106/191 (55.50%), Postives = 142/191 (74.35%), Query Frame = 0
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFREDE 191
            A+A+L L L RLT++EE KLK E +EL+  ++ LE LM ED+K+   +  ELKE K+ +   RR+ I  E  +L EEDL+ ND SV++VT +GY+KR+P+EEF  Q+RGTRGK GAK+S D D V HFF C DHDT+LFVS++GVA+ ++A+QVP  SRTA+GVP+PQVLPI  D+ I SVL +  F+EDE
Sbjct:  450 AEALLRLTLARLTALEEEKLKTELEELRARISELEALMREDSKVYHLMETELKELKRKYGGQRRSEIIHEAADLTEEDLIPNDRSVLIVTHSGYVKRLPVEEFDPQSRGTRGKLGAKISDD-DSVAHFFACNDHDTLLFVSNRGVAFTVKAYQVPLSSRTARGVPLPQVLPIAADDRITSVLPITQFKEDE 639          
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: A0A6V2HA12_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2HA12_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.430e-56
Identity = 98/192 (51.04%), Postives = 135/192 (70.31%), Query Frame = 0
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHD-VVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFREDE 191
            ADA+L L+LG+LT + +GKL  E K L+ +   LE L+++DN + D + +E +  K    +PRRT I+ +EGELN+ DL+ N  SV+VVT  GYIKR+PL+ F +Q RGTRGK     ++  D  V H FTC DHDT+L V+ KG+AYG+RAFQVP+ SRTA+GVP+P VLP+  D+ I S+L V +F +DE
Sbjct:  173 ADAVLRLQLGQLTRLNKGKLTDERKTLEASRKELEKLLSDDNAVRDLMRDEFENLKGTFGIPRRTKIEADEGELNDIDLIRNSRSVIVVTRGGYIKRLPLKTFESQGRGTRGKKSTTSNASQDNEVAHCFTCNDHDTLLMVTQKGIAYGLRAFQVPAASRTARGVPIPSVLPVKADDVITSILPVAEFTKDE 364          
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: A0A6M8BHV1_9CYAN (DNA gyrase subunit A n=3 Tax=Thermoleptolyngbya TaxID=2303528 RepID=A0A6M8BHV1_9CYAN)

HSP 1 Score: 200 bits (508), Expect = 2.190e-56
Identity = 99/190 (52.11%), Postives = 140/190 (73.68%), Query Frame = 0
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFRED 190
            ADAIL ++L RLT++E GK++AE  ELQ  +  L+ ++    ++L  I +E  E K  HA PRRT+I+P +GEL + DL+AN+ ++++VT  GYIKRMP+  F AQNR TRGK+G ++  D D + HF TC DHD ILF SD+GVAY +RA+QVP+GSRT++GVP+ Q+LPI  +E+I SV+AV +F +D
Sbjct:  429 ADAILQMQLRRLTALEAGKIQAEHDELQVKIADLQDILANRERILQIIRDEAVELKAAHATPRRTVIEPLDGELGDIDLIANERAIILVTEQGYIKRMPVSTFEAQNRATRGKSGTRMKED-DGIDHFLTCNDHDNILFFSDRGVAYCLRAYQVPTGSRTSRGVPIVQLLPIPVEEKITSVVAVTEFTDD 617          
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: UPI001684E3D6 (DNA topoisomerase (ATP-hydrolyzing) subunit A n=2 Tax=Microcoleus sp. FACHB-1515 TaxID=2692821 RepID=UPI001684E3D6)

HSP 1 Score: 197 bits (501), Expect = 2.020e-55
Identity = 95/191 (49.74%), Postives = 140/191 (73.30%), Query Frame = 0
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFREDE 191
            ADAIL ++L RLT++E  K++ E +ELQ  +  L+ ++    ++L+ I  E+ E + MH  PRRT+I+  +GEL + DL+AND ++++VT  GY+KRMP+ EF AQ+R TRGKAGAK+  D D ++HFFTC DHD++LF SD+GV Y +RA+Q+P  SRTA+GVP+ Q+LPI   E+I S++ V +F +DE
Sbjct:  429 ADAILQMQLRRLTALEAEKIQQEHEELQRRIADLQDILDRRERVLEIIQTEISELRSMHGTPRRTVIEHTDGELGDIDLIANDQALILVTEQGYVKRMPVSEFEAQSRATRGKAGAKMKED-DNIEHFFTCNDHDSVLFFSDRGVVYSLRAYQIPIASRTARGVPIVQMLPIPHVEKITSIVPVSEFTDDE 618          
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: A0A3M1P6P8_9CYAN (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Cyanobacteria bacterium J069 TaxID=2420337 RepID=A0A3M1P6P8_9CYAN)

HSP 1 Score: 194 bits (493), Expect = 2.060e-55
Identity = 95/190 (50.00%), Postives = 137/190 (72.11%), Query Frame = 0
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFRED 190
            ADAIL ++L RLT++E GK+ AE  +LQ  +  L  ++   +++L  I +E  E K  HA PRRT+I+P +GEL + DL+AN+ ++++VT  GYIKRMP+  F AQNR TRGK+G ++  D D + HF TC DHD ILF SD+GVAY +RA+Q+P+GSRT++G+P+ Q+LPI   E+I SV+ V +F +D
Sbjct:  429 ADAILQMQLRRLTALEAGKIHAEHDDLQVKIADLRDILANRDRILQIIRDEAVELKAAHATPRRTVIEPLDGELGDIDLIANERAIILVTEQGYIKRMPVSTFEAQNRATRGKSGTRMKED-DGIDHFLTCNDHDNILFFSDRGVAYCVRAYQIPTGSRTSRGIPIVQLLPIPVAEKITSVVPVSEFTDD 617          
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: A0A1Z4IKQ9_9CYAN (DNA gyrase subunit A n=7 Tax=Scytonemataceae TaxID=1182 RepID=A0A1Z4IKQ9_9CYAN)

HSP 1 Score: 197 bits (500), Expect = 2.890e-55
Identity = 94/191 (49.21%), Postives = 141/191 (73.82%), Query Frame = 0
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFREDE 191
            ADAIL ++L RLT++E  K+++E +ELQ  +  L+ ++    ++L+ I  E+ + KQ HA PRRT+I P EGE++E DL+AN+ +++++T  GYIKRMP+  F AQ+R TRGKA AK+  D D V+HF TC DHD+ILF S++GV Y ++A+Q+P GSRT++G P+ Q+LPI  +E+I S++ VD+F  DE
Sbjct:  425 ADAILQMQLRRLTALEADKIRSEHEELQAIIANLQDILARRERILEIIQNEVTQLKQKHATPRRTVISPLEGEIDERDLIANEKALILLTEQGYIKRMPVSTFEAQSRATRGKAAAKIKED-DNVEHFLTCCDHDSILFFSERGVVYCLKAYQIPVGSRTSRGTPIVQMLPIPKEEKITSIVPVDEFSSDE 614          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKP9_9PHAE2.390e-10387.96DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Ectoca... [more]
A0A836CKD9_9STRA4.500e-7666.49DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Tribon... [more]
A0A7S2XVV8_9STRA6.350e-7459.69DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1... [more]
W7TLA9_9STRA3.880e-6255.73DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Monodo... [more]
A0A0G4ESH9_VITBC1.370e-5955.50DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Vitrel... [more]
A0A6V2HA12_9STRA1.430e-5651.04DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Ditylu... [more]
A0A6M8BHV1_9CYAN2.190e-5652.11DNA gyrase subunit A n=3 Tax=Thermoleptolyngbya Ta... [more]
UPI001684E3D62.020e-5549.74DNA topoisomerase (ATP-hydrolyzing) subunit A n=2 ... [more]
A0A3M1P6P8_9CYAN2.060e-5550.00DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1... [more]
A0A1Z4IKQ9_9CYAN2.890e-5549.21DNA gyrase subunit A n=7 Tax=Scytonemataceae TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013757Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamilyGENE3D1.10.268.10coord: 1..67
e-value: 9.6E-14
score: 53.6
IPR035516DNA gyrase/topoisomerase IV, subunit A, C-terminalGENE3D2.120.10.90coord: 76..191
e-value: 2.8E-34
score: 120.3
IPR035516DNA gyrase/topoisomerase IV, subunit A, C-terminalSUPERFAMILY101904GyrA/ParC C-terminal domain-likecoord: 79..190
IPR006691DNA gyrase/topoisomerase IV, subunit A, C-terminal repeatPFAMPF03989DNA_gyraseA_Ccoord: 135..184
e-value: 9.4E-4
score: 18.6
coord: 85..129
e-value: 1.7E-11
score: 43.4
NoneNo IPR availablePANTHERPTHR43493FAMILY NOT NAMEDcoord: 1..190
IPR013760DNA topoisomerase, type IIA-like domain superfamilySUPERFAMILY56719Type II DNA topoisomerasecoord: 1..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10556contigD-dudresnayi_contig10556:3621..8985 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10556.608.1mRNA_D-dudresnayi_contig10556.608.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig10556 3621..8985 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig10556.608.1 ID=prot_D-dudresnayi_contig10556.608.1|Name=mRNA_D-dudresnayi_contig10556.608.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=191bp
ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVE
ELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPL
EEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIR
AFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFREDE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013757Topo_IIA_A_a_sf
IPR035516Gyrase/topoIV_suA_C
IPR006691GyrA/parC_rep
IPR013760Topo_IIA-like_dom_sf