mRNA_D-dudresnayi_contig10556.608.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig10556.608.1
Unique NamemRNA_D-dudresnayi_contig10556.608.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: A0A6H5KKP9_9PHAE (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKP9_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 2.390e-103
Identity = 168/191 (87.96%), Postives = 179/191 (93.72%), Query Frame = 1 
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFREDE 573
            ADAILALRLGRLTSMEEGKLKAEA++L+ TM RLEG+M ED+K++D IVEEL E K  HAVPRRTMIKP+EGEL EEDLLAND+SVVVVT AGYIKRMPLEEF+AQNRGTRGKAGAK+SSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVP GSRTAKGVPVPQVLPI GDEEIASVLAVDDFREDE
Sbjct:  585 ADAILALRLGRLTSMEEGKLKAEAEDLKATMERLEGVMNEDSKVMDIIVEELTEAKNKHAVPRRTMIKPDEGELQEEDLLANDSSVVVVTAAGYIKRMPLEEFTAQNRGTRGKAGAKMSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPVGSRTAKGVPVPQVLPIAGDEEIASVLAVDDFREDE 775
[Close]
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: A0A836CKD9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKD9_9STRA)

HSP 1 Score: 253 bits (645), Expect = 4.500e-76
Identity = 127/191 (66.49%), Postives = 155/191 (81.15%), Query Frame = 1 
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFREDE 573
            ADA+LALRLGRLT  EE KLK E  +L   + RL GLM +D  +   +V+EL E K  HAVPRR++IK +EGELN+EDLLANDNS++V+T +GYIKRMPLEEF AQ RGTRGKAGAKLS   D V  FFTC+DH+T+LFVSD+GVAYG+RAFQVP+ SRTAKGVPVPQVLP+  DE I+SV+ V++F++DE
Sbjct:  407 ADAVLALRLGRLTKAEEIKLKKEHTDLTKEIKRLLGLMQDDESVRQVMVKELLELKAKHAVPRRSIIKKDEGELNDEDLLANDNSIIVITRSGYIKRMPLEEFQAQRRGTRGKAGAKLSDPGDEVAQFFTCRDHNTVLFVSDRGVAYGLRAFQVPTASRTAKGVPVPQVLPLSADERISSVIPVEEFKDDE 597
[Close]
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: A0A7S2XVV8_9STRA (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVV8_9STRA)

HSP 1 Score: 233 bits (595), Expect = 6.350e-74
Identity = 114/191 (59.69%), Postives = 152/191 (79.58%), Query Frame = 1 
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFREDE 573
            A+AI+ LRL RLTSMEEGKLK+E KEL+ T+ RL+ LM +D ++ D ++EELKE K  HAVPRR+ I  E+GEL++EDLL+ND S++ +T  GYIKRMP++ F AQNRGTRGK+GAKL+ +  + Q    C DHDT+LFVS +G+AY +RAFQVP GSRTAKGVP+PQVLPI G++++ ++L V +F E+E
Sbjct:   70 AEAIVNLRLSRLTSMEEGKLKSEHKELEKTIRRLQDLMDQDEQVYDVMIEELKEIKNKHAVPRRSKILKEQGELSDEDLLSNDRSIITITNTGYIKRMPMDTFDAQNRGTRGKSGAKLTGEGRMEQ-VLACNDHDTLLFVSAEGIAYAVRAFQVPQGSRTAKGVPLPQVLPISGEDKVVAMLPVSEFSEEE 259
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BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: W7TLA9_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLA9_9STRA)

HSP 1 Score: 217 bits (552), Expect = 3.880e-62
Identity = 107/192 (55.73%), Postives = 147/192 (76.56%), Query Frame = 1 
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAV-DDFREDE 573
            A AILAL LGRLT++E+ KL+AE ++L+G +   + +M +D K+ D + +EL+E +  HAVPRR+ I+   G L E DLLAND SV++VT AGYIKRMPL++F  Q RGTRGKAGA++S D D+V HFF C DHD ++F+S+KGVA+GIRAFQVP  SR +KGVP+PQVLP+  D+ ++SV+ + + F+ DE
Sbjct:  553 AQAILALTLGRLTALEDAKLRAEREQLRGQIEDFQAMMRQDEKVFDVMKQELREIRAKHAVPRRSSIRAHAGALTELDLLANDRSVMMVTEAGYIKRMPLDDFEQQRRGTRGKAGARMSQD-DLVNHFFACNDHDHVVFISEKGVAFGIRAFQVPVASRVSKGVPLPQVLPLSSDDHVSSVIPLGESFQADE 743
[Close]
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: A0A0G4ESH9_VITBC (DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4ESH9_VITBC)

HSP 1 Score: 209 bits (533), Expect = 1.370e-59
Identity = 106/191 (55.50%), Postives = 142/191 (74.35%), Query Frame = 1 
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFREDE 573
            A+A+L L L RLT++EE KLK E +EL+  ++ LE LM ED+K+   +  ELKE K+ +   RR+ I  E  +L EEDL+ ND SV++VT +GY+KR+P+EEF  Q+RGTRGK GAK+S D D V HFF C DHDT+LFVS++GVA+ ++A+QVP  SRTA+GVP+PQVLPI  D+ I SVL +  F+EDE
Sbjct:  450 AEALLRLTLARLTALEEEKLKTELEELRARISELEALMREDSKVYHLMETELKELKRKYGGQRRSEIIHEAADLTEEDLIPNDRSVLIVTHSGYVKRLPVEEFDPQSRGTRGKLGAKISDD-DSVAHFFACNDHDTLLFVSNRGVAFTVKAYQVPLSSRTARGVPLPQVLPIAADDRITSVLPITQFKEDE 639
[Close]
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: A0A6V2HA12_9STRA (DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2HA12_9STRA)

HSP 1 Score: 196 bits (499), Expect = 1.430e-56
Identity = 98/192 (51.04%), Postives = 135/192 (70.31%), Query Frame = 1 
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHD-VVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFREDE 573
            ADA+L L+LG+LT + +GKL  E K L+ +   LE L+++DN + D + +E +  K    +PRRT I+ +EGELN+ DL+ N  SV+VVT  GYIKR+PL+ F +Q RGTRGK     ++  D  V H FTC DHDT+L V+ KG+AYG+RAFQVP+ SRTA+GVP+P VLP+  D+ I S+L V +F +DE
Sbjct:  173 ADAVLRLQLGQLTRLNKGKLTDERKTLEASRKELEKLLSDDNAVRDLMRDEFENLKGTFGIPRRTKIEADEGELNDIDLIRNSRSVIVVTRGGYIKRLPLKTFESQGRGTRGKKSTTSNASQDNEVAHCFTCNDHDTLLMVTQKGIAYGLRAFQVPAASRTARGVPIPSVLPVKADDVITSILPVAEFTKDE 364
[Close]
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: A0A6M8BHV1_9CYAN (DNA gyrase subunit A n=3 Tax=Thermoleptolyngbya TaxID=2303528 RepID=A0A6M8BHV1_9CYAN)

HSP 1 Score: 200 bits (508), Expect = 2.190e-56
Identity = 99/190 (52.11%), Postives = 140/190 (73.68%), Query Frame = 1 
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFRED 570
            ADAIL ++L RLT++E GK++AE  ELQ  +  L+ ++    ++L  I +E  E K  HA PRRT+I+P +GEL + DL+AN+ ++++VT  GYIKRMP+  F AQNR TRGK+G ++  D D + HF TC DHD ILF SD+GVAY +RA+QVP+GSRT++GVP+ Q+LPI  +E+I SV+AV +F +D
Sbjct:  429 ADAILQMQLRRLTALEAGKIQAEHDELQVKIADLQDILANRERILQIIRDEAVELKAAHATPRRTVIEPLDGELGDIDLIANERAIILVTEQGYIKRMPVSTFEAQNRATRGKSGTRMKED-DGIDHFLTCNDHDNILFFSDRGVAYCLRAYQVPTGSRTSRGVPIVQLLPIPVEEKITSVVAVTEFTDD 617
[Close]
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: UPI001684E3D6 (DNA topoisomerase (ATP-hydrolyzing) subunit A n=2 Tax=Microcoleus sp. FACHB-1515 TaxID=2692821 RepID=UPI001684E3D6)

HSP 1 Score: 197 bits (501), Expect = 2.020e-55
Identity = 95/191 (49.74%), Postives = 140/191 (73.30%), Query Frame = 1 
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFREDE 573
            ADAIL ++L RLT++E  K++ E +ELQ  +  L+ ++    ++L+ I  E+ E + MH  PRRT+I+  +GEL + DL+AND ++++VT  GY+KRMP+ EF AQ+R TRGKAGAK+  D D ++HFFTC DHD++LF SD+GV Y +RA+Q+P  SRTA+GVP+ Q+LPI   E+I S++ V +F +DE
Sbjct:  429 ADAILQMQLRRLTALEAEKIQQEHEELQRRIADLQDILDRRERVLEIIQTEISELRSMHGTPRRTVIEHTDGELGDIDLIANDQALILVTEQGYVKRMPVSEFEAQSRATRGKAGAKMKED-DNIEHFFTCNDHDSVLFFSDRGVVYSLRAYQIPIASRTARGVPIVQMLPIPHVEKITSIVPVSEFTDDE 618
[Close]
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: A0A3M1P6P8_9CYAN (DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1 Tax=Cyanobacteria bacterium J069 TaxID=2420337 RepID=A0A3M1P6P8_9CYAN)

HSP 1 Score: 194 bits (493), Expect = 2.060e-55
Identity = 95/190 (50.00%), Postives = 137/190 (72.11%), Query Frame = 1 
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFRED 570
            ADAIL ++L RLT++E GK+ AE  +LQ  +  L  ++   +++L  I +E  E K  HA PRRT+I+P +GEL + DL+AN+ ++++VT  GYIKRMP+  F AQNR TRGK+G ++  D D + HF TC DHD ILF SD+GVAY +RA+Q+P+GSRT++G+P+ Q+LPI   E+I SV+ V +F +D
Sbjct:  429 ADAILQMQLRRLTALEAGKIHAEHDDLQVKIADLRDILANRDRILQIIRDEAVELKAAHATPRRTVIEPLDGELGDIDLIANERAIILVTEQGYIKRMPVSTFEAQNRATRGKSGTRMKED-DGIDHFLTCNDHDNILFFSDRGVAYCVRAYQIPTGSRTSRGIPIVQLLPIPVAEKITSVVPVSEFTDD 617
[Close]
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Match: A0A1Z4IKQ9_9CYAN (DNA gyrase subunit A n=7 Tax=Scytonemataceae TaxID=1182 RepID=A0A1Z4IKQ9_9CYAN)

HSP 1 Score: 197 bits (500), Expect = 2.890e-55
Identity = 94/191 (49.21%), Postives = 141/191 (73.82%), Query Frame = 1 
Query:    1 ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVEELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPLEEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIRAFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFREDE 573
            ADAIL ++L RLT++E  K+++E +ELQ  +  L+ ++    ++L+ I  E+ + KQ HA PRRT+I P EGE++E DL+AN+ +++++T  GYIKRMP+  F AQ+R TRGKA AK+  D D V+HF TC DHD+ILF S++GV Y ++A+Q+P GSRT++G P+ Q+LPI  +E+I S++ VD+F  DE
Sbjct:  425 ADAILQMQLRRLTALEADKIRSEHEELQAIIANLQDILARRERILEIIQNEVTQLKQKHATPRRTVISPLEGEIDERDLIANEKALILLTEQGYIKRMPVSTFEAQSRATRGKAAAKIKED-DNVEHFLTCCDHDSILFFSERGVVYCLKAYQIPVGSRTSRGTPIVQMLPIPKEEKITSIVPVDEFSSDE 614
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10556.608.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKP9_9PHAE2.390e-10387.96DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Ectoca... [more]
A0A836CKD9_9STRA4.500e-7666.49DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Tribon... [more]
A0A7S2XVV8_9STRA6.350e-7459.69DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1... [more]
W7TLA9_9STRA3.880e-6255.73DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Monodo... [more]
A0A0G4ESH9_VITBC1.370e-5955.50DNA topoisomerase (ATP-hydrolyzing) n=2 Tax=Vitrel... [more]
A0A6V2HA12_9STRA1.430e-5651.04DNA topoisomerase (ATP-hydrolyzing) n=1 Tax=Ditylu... [more]
A0A6M8BHV1_9CYAN2.190e-5652.11DNA gyrase subunit A n=3 Tax=Thermoleptolyngbya Ta... [more]
UPI001684E3D62.020e-5549.74DNA topoisomerase (ATP-hydrolyzing) subunit A n=2 ... [more]
A0A3M1P6P8_9CYAN2.060e-5550.00DNA topoisomerase (ATP-hydrolyzing) (Fragment) n=1... [more]
A0A1Z4IKQ9_9CYAN2.890e-5549.21DNA gyrase subunit A n=7 Tax=Scytonemataceae TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10556contigD-dudresnayi_contig10556:3621..8985 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score331.3
Seed ortholog evalue3.1e-88
Seed eggNOG ortholog2880.D8LPZ0
Preferred nameGYRA
KEGG koko:K02469,ko:K03164
KEGG Pathwayko01524,map01524
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0009295,GO:0009507,GO:0009536,GO:0016592,GO:0031974,GO:0031981,GO:0032991,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0070013
EggNOG free text desc.DNA topoisomerase type II (ATP-hydrolyzing) activity
EggNOG OGsCOG0187@1,KOG0355@2759
EC5.99.1.3
COG Functional cat.L
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032,ko03036,ko03400
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionDNA gyrase subunit A
Ec32 orthologEc-15_001600.1
Exons6
Model size575
Cds size573
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10556.608.1prot_D-dudresnayi_contig10556.608.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig10556 3621..8985 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622927558.5721576-CDS-D-dudresnayi_contig10556:3620..37181622927558.5721576-CDS-D-dudresnayi_contig10556:3620..3718Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10556 3621..3718 +
1690556806.8245976-CDS-D-dudresnayi_contig10556:3620..37181690556806.8245976-CDS-D-dudresnayi_contig10556:3620..3718Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10556 3621..3718 +
1622927558.584241-CDS-D-dudresnayi_contig10556:4621..47371622927558.584241-CDS-D-dudresnayi_contig10556:4621..4737Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10556 4622..4737 +
1690556806.8344424-CDS-D-dudresnayi_contig10556:4621..47371690556806.8344424-CDS-D-dudresnayi_contig10556:4621..4737Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10556 4622..4737 +
1622927558.5964808-CDS-D-dudresnayi_contig10556:5301..54101622927558.5964808-CDS-D-dudresnayi_contig10556:5301..5410Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10556 5302..5410 +
1690556806.8424745-CDS-D-dudresnayi_contig10556:5301..54101690556806.8424745-CDS-D-dudresnayi_contig10556:5301..5410Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10556 5302..5410 +
1622927558.6210992-CDS-D-dudresnayi_contig10556:7202..72751622927558.6210992-CDS-D-dudresnayi_contig10556:7202..7275Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10556 7203..7275 +
1690556806.8511713-CDS-D-dudresnayi_contig10556:7202..72751690556806.8511713-CDS-D-dudresnayi_contig10556:7202..7275Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10556 7203..7275 +
1622927558.636805-CDS-D-dudresnayi_contig10556:8127..82351622927558.636805-CDS-D-dudresnayi_contig10556:8127..8235Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10556 8128..8235 +
1690556806.8601394-CDS-D-dudresnayi_contig10556:8127..82351690556806.8601394-CDS-D-dudresnayi_contig10556:8127..8235Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10556 8128..8235 +
1622927558.6520448-CDS-D-dudresnayi_contig10556:8916..89851622927558.6520448-CDS-D-dudresnayi_contig10556:8916..8985Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10556 8917..8985 +
1690556806.8689725-CDS-D-dudresnayi_contig10556:8916..89851690556806.8689725-CDS-D-dudresnayi_contig10556:8916..8985Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig10556 8917..8985 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig10556.608.1

>prot_D-dudresnayi_contig10556.608.1 ID=prot_D-dudresnayi_contig10556.608.1|Name=mRNA_D-dudresnayi_contig10556.608.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=191bp
ADAILALRLGRLTSMEEGKLKAEAKELQGTMTRLEGLMTEDNKLLDAIVE
ELKETKQMHAVPRRTMIKPEEGELNEEDLLANDNSVVVVTGAGYIKRMPL
EEFSAQNRGTRGKAGAKLSSDHDVVQHFFTCQDHDTILFVSDKGVAYGIR
AFQVPSGSRTAKGVPVPQVLPIGGDEEIASVLAVDDFREDE
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mRNA from alignment at D-dudresnayi_contig10556:3621..8985+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig10556.608.1 ID=mRNA_D-dudresnayi_contig10556.608.1|Name=mRNA_D-dudresnayi_contig10556.608.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=5365bp|location=Sequence derived from alignment at D-dudresnayi_contig10556:3621..8985+ (Desmarestia dudresnayi DdudBR16 monoicous)
GCGGACGCTATCTTGGCCCTGCGTCTGGGACGGCTAACTTCGATGGAGGA
GGGGAAGTTGAAGGCGGAAGCTAAGGAGCTGCAAGGCACGATGACTCGGT
GCGTTTTTTTTCGTTTTTGTTTCTTGATACACAATTGCATCAGCCGTGAC
GTTCCAAAGCTGGTTCTTAGCCTTTGTGTAGGCCGGGTCTTCAACATGTT
CGTTTTATTATTTTTACTTACGAAGATATCGGTCGTGACGTTCCAAAACT
GGTTCGGGGGCCAGGGGATAATCGTCAAATCTCGCTGTGTGATACATCGG
TCGCGCGGAGTCTGTATATAGTTTGTATGACAATAAATAGATGATGATAC
ATGATAATTTTTCTTGTCGAAAATGTGATTGGTTGATTGAATGGATGTGA
TTGGTTGGTTTATTGACTGAAAGTGAGTTGTTTGATAATGATGGATGGTA
GATTTGATCGTGAAATATGCGACGGTTGAACGTGATTGGTTGATTATTAG
TTGTATGATGATGATAGATGGTAGATTTTTCGTGAAAAATGCGACGATTG
CATGTGATTGGTTGTTTGGTTAACTGAACGCGAGTTGTATGGTAATGATA
GATGGTAGATTTTCTCGTGAAAAATGGGACGATTGAACGTGATTCTTGAT
TCGGTCGATTGTGAGTTGTATGATAATGATAGATGGTAGATTTTTTCATG
AAAAATGCGACGATTGCATGTGATTGGTTGATTGATTAGTTGATTGAATG
TGATTGGTTGTTTGGCTAACTGAATGTGAGTTGTATGGTGATGATAAATG
GTAGATTTTCTCGTGAAAATGCGACGATTGAACGTGATTGGTTGATTGGA
TGTGATTGATTGATTGGTTAAATGTGATCGGTTGGTTCGTTGACTGAATG
TGATTGGTTGGTTGATTGATTGACTGATTGGTTGTTTACTCCGTTTGTTC
CCTCTCCTCCAACACACAAATATACATACTTTTCTATATTGTATGTGTTA
GGCTTGAAGGTCTGATGACAGAGGATAACAAATTGTTGGATGCTATCGTG
GAGGAGCTCAAGGAAACCAAGCAGATGCACGCCGTGCCGCGGAGGACAAT
GATCAAGCCCGAAGAAGGTGAACAGCACATGGAAAAGGGGGATATGTAGT
GGTACGCTTTTAGTAAAGCCTATTTTCCTTGTTTGATTTTCTGCTTTTTT
TTTGTCGTATTGGTTGCGATTTGGTGCTAGTATGTGTATGATAGCTTGTG
ACCAGGGAATTTCGTGTCTCTCTAAGACGGAAGAATAGGTTCAGGCTATG
AGTAAGCTACTGGATGTTTGTTATTTTTTGCTACAAATACATCAGCCGTG
ACGTTCGTAGAGTAGAAAGGATGATTTTTAATGTGGAAGACAATGGCAAC
AACAAACAACAACAATGTTCGTATTTTTTATTTCTGTGTTTTTCTTATTT
AGTAGTATGTTTGTATGGTACGCAGAGAGTTTTCTCTTTTTTTTCTTTTT
TTTTTGCCGGAAAAAGAGAGCTAGGGGTTTCTTCACCTGTCCAATAATAC
GGATTTTAGGGTGTGCAACTCGCATGAAAAAATGCGGCCCAACCAAGACC
AATCGAATCGATCAAAACTCGGTAAAATAGAGCCAGTTAACCCTACCGAA
CCCACGTCTCTATGTGTGTGTGTCTCCATAGGGGAACTTAACGAGGAAGA
CCTGTTGGCGAACGACAATTCCGTGGTGGTCGTGACAGGCGCAGGCTACA
TCAAGCGCATGCCGCTCGAGGAATTCTCTGCGCAGAACAGGTAGCAATAG
GCAAAATAGAAAATAGGGGAGCAGCAAGGCCTTTTTTACACGTTTTGCCT
ATCAATAGTTTACATATAAAGCAGTAGTAATGAGCCGCCTTAGCGCTATT
TTTTTTTTATTTTTTTTTTTGCCGGATCTTTGGAATGTTCGTTTTATTAT
ATGACTATTATTAGTAACAACAACGTGGGCTGTTCAGCAGTTTCGGAAAA
TTCTACTGCTGCACCCTTTAACCCGAAACCCTAACGAACGCACTACATTA
CTGTTTAATACAGAGGGTCAAAACCTCTGGAAAATTCCTGTATAGTTTCG
TCCTACAACAACGCTAAACACCTATCGACGTGATCTTGAGGGAGGTTTTC
TACTCCCTTGTTATTATTGATGTGGTCGGTAGGTTGGACTGATTCTATCT
TTTTTTTCACTTGCTGTTATTATGGTGTGGTCGTTAGGTTAGACTGATTC
TATCTTTTTTTTCACTTGCTGTTACTATGGTGTGGTCGTTAGGTTAGGGT
TAGGGTGAGTTCTATGATGTTATTATGGTGTGGTCGTTAGGTTGGACTGA
TTCTATCTTTTTTTTCACTTGCTGTTATTATGGTGTGGTCGTTTAGGTTA
GGGTTAGGGCTAGTTCTACTAGAAAATGTTCCGAACTGCTGAACTGAACT
GCTGAACAGCCCACGCTGGTATATACAACTACAGTATTCCTGGAGACCGC
CCCCCGAACAAGTTCAGCTACTCATTTCTCACTGAAGGTTACTGTATCGC
TCAGCGCGCCTGTCTGAGCAAGCCGTGATCACAGGTGCTTTGCCTTCTCC
CTCCTCCCCGATACATTCCTCGGTTTTGTATCGCGCACAGGGTGGTTTGG
CATTCCCGTGTAGAGTTGGTTGGCTTTGCTTCATCGAACTGTGCGTGCTA
TTTTAGGTGTACCTATAGTAATAAATGGTGTTAAGCTCGGCGTAAAGTGC
TGCTGGGCAAAAATTGAAAAGAATCGTTTGGGCATCGATCGCAAGACACT
TTGTTGCAAAACCTACATTGTCAGATCAATAGGTTGCCTATCGATAGGAT
CATACGCAGTATTGCAATAGTTTTCCTCTCAATATGATCATATTGCAAAT
AGGCTGCCTATCAATAGGATCTTATTGCAATATATTGCCTATCGATAGGA
TCATATTGTAATAAGGTTCCTATCGATAGGATCCTATTGCATAGAGGTTT
CCTATCAATAGGATCCTATTGCAATAGGTTGTCGATCCTTGGCGACGTTG
GCTATATCGATGGGCACCTTCATCAATCTATTGCAATATGTTGTCTATCC
TTGGCGATGATAGCTATATCGATAGACACCTTCATCAGCCTATTGTTTCA
ACGATATTATTATTAATAGCTATCGAGAGGCAATTTCCCGAGTTTATCGT
TGTCACAATAATCATTCGTCGTACGAGTACAGTAAACGATAAACGCTTTC
CCGAGTCTATCGTTACCATTATAGGCTTTCTTAGTATATAAGCACACGAT
AAGCACTTTCCCGAGTCTTACCCTTATTACAATAGGCCTCCATGCGTAAG
TAAACGACATACACTTTCCCGATTATATCATTACTACAGTAGGCTTTCGT
AGTAAGTGCCTGGTACACGATAAGCACCTTCCCGAGTCTATTCGTATCGT
TATCGGAAATATAGGCTTTCGTAGTACATATAAGTCAAAGATGGGAAACC
TATCGTTGGTGATGCCTGGATTTTCAACCTCGAGCGGGTTCTTTTTTTTT
TTTTTTTGCACTGCATTTCATTGTTTTGTCAGGGGGACGCGAGGCAAAGC
GGGGGCGAAGCTGTCGTCTGATCACGACGTCGTGCAGCATTTCTTCACGT
GTCAGGTAGGTCATGTACGTTTAATTAGTTAATTAATTATTGCGAGCGAA
GCGAGTTTTCTAATTTCCGACGGCGCTAAAAATAGGTATGCCCCCCCCGC
CCCTCCCCGTGTTTGGCTTGAACATCTCTGTGAAACGCAACCGGTGTTAA
GAGTGTACTTGTATATGATAGTTCAATAAACCCTTACTCTGCAGTATACA
ACGAATTGTGCGGTGAGGTTACGGTACACGATTATAGTACTTGCCAGGTA
CTACTTTACTACTGCGTACTATACTGCAATAGCACCTATTGGTAGTCTAT
TGGTAGTCACCATATCGTCAATGAGTATATTATACCAGGTATGTGACATA
GCAGGTGTTTTTACAAGTACACCGTTTACCCCCCCCCCCCGCCCCCCTGA
ACGTTGGAGGTGTCTCTATTAAGAGTAGGAACGGTGCTCCATGTCGAAAG
GGATGCGTGGTCAATGGTCAAATGACTTAAGGCAAGCAACAAATGAGTAC
CCCCCATCATATAGGATATGGTACAAACGTAACGAGTGCTCAAATATTGG
AGGTGTCTGTCTCGATTAGGAGTAGGAACGGTGCTCCGTCTCGAAAGAGA
TGCGTAAGTCAATGGTCAAATGACTTGAGGCAAGCAACAAATGAGTATTC
CCCCCCCCCCCGCCCCCCCAAATATTGGACGTGTCTCTAGTAGGTAGGAC
TAGGAACGGTTCTCCGTCTCGAAAGGGATGCGTACTTAATGGTCAAATTA
CTATGGCAAGCAACAAATGAGTACCCTCCCCGCCGCCCCCCGCCGCTCCC
CGCCGTGCCTTGAATGACGACTGCTGTATGCTTCTGTTTCGTCTCCTGAT
ATCATAGGATCATGACACGATTTTGTTCGTTTCAGACAAGGGTGTGGCGT
ATGGCATCCGGGCATTCCAGGTGCCGTCGGGGTCTCGCACCGCAAAAGGC
GTTCCGGTTCCGCAGGTGACGTCACTCGAATTTGAATTTGACGTGACGTG
GTTTGACGTGACGTGACGTGATCTGACGTTACTATATTTGTTTAATGAGA
TTTCCCCCCAGGGGGCGATTTTTGTTTGTTTTTTCGTTATTGCATGTGGT
CTGTCCTGTAGATATCGTGTACTACTATTATACTTCGAAGTATTGTTGCA
CGGTGTTTTTGTGATACGCGTGCTTTTCTTGAATAGATGTGGTACTTTCT
GCCATAATGACTACTGTTTTGTGCTGTTAATGTTTAACCGTTGAGTGGGC
AAACCTATTTCCAAATATTAATTTTCTTTTACGAGTAGACTATCGTAAGA
CCTAAAAAAATGTAAAAAGCAACAAAATAGATGAAAAAAAAAGCGTAGAA
AGAAAATGAAAAAATCATGTGATGGTAGGCTAGAGCGTATTGATAGTATC
AAATGATTAATTAATTTTGGGAAAAGGCGAGGACAAATAGCAATCGTTTA
ACACCTTTGCTGACCAATCAAACCATCAATCAATCAACGTATGTTTCCGC
TGCTCCGGGTTTGCTTTGTTTTCTTGCATTTATTCTCCCGTCAATAGTGT
ATGAGTACTATATACTGTACACAGCGCATGAGTACCATTAATATATATTG
TACGCAGTATGTAATAGGACCCATCTTTTTTTTTTTTTTTGTGCAGGTGC
TGCCCATTGGAGGCGACGAGGAAATCGCTAGCGTTCTAGCCGTCGACGAT
TTCAGGGAAGACGAG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig10556:3621..8985+

>mRNA_D-dudresnayi_contig10556.608.1 ID=mRNA_D-dudresnayi_contig10556.608.1|Name=mRNA_D-dudresnayi_contig10556.608.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1146bp|location=Sequence derived from alignment at D-dudresnayi_contig10556:3621..8985+ (Desmarestia dudresnayi DdudBR16 monoicous)
GCGGACGCTATCTTGGCCCTGCGTCTGGGACGGCTAACTTCGATGGAGGA
GGGGAAGTTGAAGGCGGAAGCTAAGGAGCTGCAAGGCACGATGACTCGGC
GGACGCTATCTTGGCCCTGCGTCTGGGACGGCTAACTTCGATGGAGGAGG
GGAAGTTGAAGGCGGAAGCTAAGGAGCTGCAAGGCACGATGACTCGGCTT
GAAGGTCTGATGACAGAGGATAACAAATTGTTGGATGCTATCGTGGAGGA
GCTCAAGGAAACCAAGCAGATGCACGCCGTGCCGCGGAGGACAATGATCA
AGCCCGAAGAAGGCTTGAAGGTCTGATGACAGAGGATAACAAATTGTTGG
ATGCTATCGTGGAGGAGCTCAAGGAAACCAAGCAGATGCACGCCGTGCCG
CGGAGGACAATGATCAAGCCCGAAGAAGGGGAACTTAACGAGGAAGACCT
GTTGGCGAACGACAATTCCGTGGTGGTCGTGACAGGCGCAGGCTACATCA
AGCGCATGCCGCTCGAGGAATTCTCTGCGCAGAACAGGGGAACTTAACGA
GGAAGACCTGTTGGCGAACGACAATTCCGTGGTGGTCGTGACAGGCGCAG
GCTACATCAAGCGCATGCCGCTCGAGGAATTCTCTGCGCAGAACAGGGGG
ACGCGAGGCAAAGCGGGGGCGAAGCTGTCGTCTGATCACGACGTCGTGCA
GCATTTCTTCACGTGTCAGGGGGACGCGAGGCAAAGCGGGGGCGAAGCTG
TCGTCTGATCACGACGTCGTGCAGCATTTCTTCACGTGTCAGGATCATGA
CACGATTTTGTTCGTTTCAGACAAGGGTGTGGCGTATGGCATCCGGGCAT
TCCAGGTGCCGTCGGGGTCTCGCACCGCAAAAGGCGTTCCGGTTCCGCAG
GATCATGACACGATTTTGTTCGTTTCAGACAAGGGTGTGGCGTATGGCAT
CCGGGCATTCCAGGTGCCGTCGGGGTCTCGCACCGCAAAAGGCGTTCCGG
TTCCGCAGGTGCTGCCCATTGGAGGCGACGAGGAAATCGCTAGCGTTCTA
GCCGTCGACGATTTCAGGGAAGACGAGGTGCTGCCCATTGGAGGCGACGA
GGAAATCGCTAGCGTTCTAGCCGTCGACGATTTCAGGGAAGACGAG
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