prot_D-dudresnayi_contig1022.257.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-dudresnayi_contig1022.257.1
Unique Name	prot_D-dudresnayi_contig1022.257.1
Type	polypeptide
Organism	Desmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length	121

Homology

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BLAST of mRNA_D-dudresnayi_contig1022.257.1 vs. uniprot
Match: A0A7S3MEQ8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MEQ8_9STRA)

HSP 1 Score: 145 bits (366), Expect = 3.490e-41
Identity = 68/84 (80.95%), Postives = 77/84 (91.67%), Query Frame = 0

Query:   12 NTLNTSLDGGYIEKGSFDNGDPTTTNLYLGNLNPITTEESLYEIFGRYGDINSVKIMWPRTEEEKARKRNCGFVSFKKRADAED 95
            N ++TSL+GG IEKGS+DNGDPTTTNLYLGNL P TTEE L ++FG+YG+INSVKIMWPR+EEEKARKRNCGFVSFK RADAED
Sbjct:  161 NVMSTSLNGGDIEKGSYDNGDPTTTNLYLGNLAPTTTEEHLLDLFGKYGEINSVKIMWPRSEEEKARKRNCGFVSFKLRADAED 244

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BLAST of mRNA_D-dudresnayi_contig1022.257.1 vs. uniprot
Match: A0A7S2DH44_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DH44_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.310e-39
Identity = 61/95 (64.21%), Postives = 80/95 (84.21%), Query Frame = 0

Query:   25 KGSFDNGDPTTTNLYLGNLNPITTEESLYEIFGRYGDINSVKIMWPRTEEEKARKRNCGFVSFKKRADAEDALIELQDIDLDGFKMVLGWGKAVK 119
            KGSFD+GDP TTNLY+GNL P  TEE+L+E+F R+G I SVKIMWPRTEEE+AR+RNCGFVSF +R DA+DA   + D +++G+++ +GWGKA+K
Sbjct:   78 KGSFDDGDPETTNLYVGNLAPTVTEETLHELFSRFGQIYSVKIMWPRTEEERARRRNCGFVSFMQRPDADDAKTTMHDGEIEGYRISIGWGKAIK 172

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BLAST of mRNA_D-dudresnayi_contig1022.257.1 vs. uniprot
Match: W2PZL8_PHYPN (Uncharacterized protein n=18 Tax=Phytophthora TaxID=4783 RepID=W2PZL8_PHYPN)

HSP 1 Score: 145 bits (367), Expect = 3.950e-38
Identity = 70/104 (67.31%), Postives = 83/104 (79.81%), Query Frame = 0

Query:   17 SLDGGYIEKGSFDNGDPTTTNLYLGNLNPITTEESLYEIFGRYGDINSVKIMWPRTEEEKARKRNCGFVSFKKRADAEDALIELQDIDLDGFKMVLGWGKAVKI 120
            S++G  + KGSFDNGDP TTNLY+GNL P  TEE L   FGRYG++ SVKIMWPR+EEE+ARKRNCGFVSF KR DA+DA I L +  L+G  M++GWGKAVKI
Sbjct:  189 SMEGVGMTKGSFDNGDPETTNLYVGNLAPTVTEEVLQAEFGRYGEVYSVKIMWPRSEEERARKRNCGFVSFYKRRDADDARINLDNKQLEGQPMIVGWGKAVKI 292

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BLAST of mRNA_D-dudresnayi_contig1022.257.1 vs. uniprot
Match: A0A8J5M413_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M413_9STRA)

HSP 1 Score: 144 bits (363), Expect = 8.630e-38
Identity = 68/104 (65.38%), Postives = 84/104 (80.77%), Query Frame = 0

Query:   17 SLDGGYIEKGSFDNGDPTTTNLYLGNLNPITTEESLYEIFGRYGDINSVKIMWPRTEEEKARKRNCGFVSFKKRADAEDALIELQDIDLDGFKMVLGWGKAVKI 120
            S++G  + KGSFDNGDP TTNLY+GNL P  TEE L   FGRYG++ SVKIMWPR+EEE+AR+RNCGFVSF +R DA+DA I L + +L+G  M++GWGKAVKI
Sbjct:  189 SMEGVCMAKGSFDNGDPETTNLYVGNLAPTVTEEVLQAEFGRYGEVYSVKIMWPRSEEERARRRNCGFVSFYERRDADDARINLDNKELEGQPMIVGWGKAVKI 292

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BLAST of mRNA_D-dudresnayi_contig1022.257.1 vs. uniprot
Match: A0A329RQG1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329RQG1_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.330e-37
Identity = 68/104 (65.38%), Postives = 84/104 (80.77%), Query Frame = 0

Query:   17 SLDGGYIEKGSFDNGDPTTTNLYLGNLNPITTEESLYEIFGRYGDINSVKIMWPRTEEEKARKRNCGFVSFKKRADAEDALIELQDIDLDGFKMVLGWGKAVKI 120
            S++G  + KGSFDNGDP TTNLY+GNL P  TEE L   FGRYG++ SVKIMWPR+EEE+AR+RNCGFVSF +R DA+DA I L + +L+G  M++GWGKAVKI
Sbjct:  155 SMEGVCMAKGSFDNGDPETTNLYVGNLAPTVTEEVLQAEFGRYGEVYSVKIMWPRSEEERARRRNCGFVSFYERRDADDARINLDNKELEGQPMIVGWGKAVKI 258

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BLAST of mRNA_D-dudresnayi_contig1022.257.1 vs. uniprot
Match: D0N9R1_PHYIT (U2-associated splicing factor, putative n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0N9R1_PHYIT)

HSP 1 Score: 144 bits (363), Expect = 1.360e-37
Identity = 68/104 (65.38%), Postives = 83/104 (79.81%), Query Frame = 0

Query:   17 SLDGGYIEKGSFDNGDPTTTNLYLGNLNPITTEESLYEIFGRYGDINSVKIMWPRTEEEKARKRNCGFVSFKKRADAEDALIELQDIDLDGFKMVLGWGKAVKI 120
            S++G  + KGSFDNGDP TTNLY+GNL P  TEE L   FGRYG++ SVKIMWPR+EEE+ARKRNCGFVSF +R DA+DA + L +  L+G  M++GWGKAVKI
Sbjct:  161 SMEGVGLAKGSFDNGDPETTNLYVGNLAPTVTEEVLQAEFGRYGEVYSVKIMWPRSEEERARKRNCGFVSFYERRDADDARVNLDNKQLEGQPMIVGWGKAVKI 264

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BLAST of mRNA_D-dudresnayi_contig1022.257.1 vs. uniprot
Match: A0A7R9H7B9_TIMPO (Hypothetical protein (Fragment) n=1 Tax=Timema poppense TaxID=170557 RepID=A0A7R9H7B9_TIMPO)

HSP 1 Score: 134 bits (337), Expect = 2.420e-37
Identity = 63/98 (64.29%), Postives = 76/98 (77.55%), Query Frame = 0

Query:   23 IEKGSFDNGDPTTTNLYLGNLNPITTEESLYEIFGRYGDINSVKIMWPRTEEEKARKRNCGFVSFKKRADAEDALIELQDIDLDGFKMVLGWGKAVKI 120
            ++ GS+DNGDPTTTNLYLGNLNP  TE+ L E+FGRYG + S+KIMWPR++EEKAR RNCGFV+F  R D E AL  L   D+  ++M LGWGKAV I
Sbjct:   36 LKYGSYDNGDPTTTNLYLGNLNPKITEQQLMEVFGRYGPLASIKIMWPRSDEEKARGRNCGFVAFMNRKDGERALKFLNGKDVMAYEMKLGWGKAVPI 133

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BLAST of mRNA_D-dudresnayi_contig1022.257.1 vs. uniprot
Match: A0A6G0KVJ4_9STRA (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=A0A6G0KVJ4_9STRA)

HSP 1 Score: 143 bits (361), Expect = 2.540e-37
Identity = 66/103 (64.08%), Postives = 83/103 (80.58%), Query Frame = 0

Query:   18 LDGGYIEKGSFDNGDPTTTNLYLGNLNPITTEESLYEIFGRYGDINSVKIMWPRTEEEKARKRNCGFVSFKKRADAEDALIELQDIDLDGFKMVLGWGKAVKI 120
            +DG  + KGSFD GDP TTNLY+GNL P  TEE L + FGRYGD+ SVKIMWPR+EEE+AR+RNCGFVSF +R DA+DA + L + +L+G  +++GWGKAVKI
Sbjct:  170 MDGAAMTKGSFDTGDPETTNLYVGNLAPTVTEELLEKEFGRYGDVYSVKIMWPRSEEERARRRNCGFVSFYERRDADDARVNLDNKELEGQPIIVGWGKAVKI 272

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BLAST of mRNA_D-dudresnayi_contig1022.257.1 vs. uniprot
Match: A0A484EBR3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EBR3_BRELC)

HSP 1 Score: 143 bits (361), Expect = 2.560e-37
Identity = 69/104 (66.35%), Postives = 81/104 (77.88%), Query Frame = 0

Query:   17 SLDGGYIEKGSFDNGDPTTTNLYLGNLNPITTEESLYEIFGRYGDINSVKIMWPRTEEEKARKRNCGFVSFKKRADAEDALIELQDIDLDGFKMVLGWGKAVKI 120
            S+D   + KGSFD GDP TTNLY+GNL P  TEE L   FGRYG++ S+KIMWPR+EEE+ARKRNCGFVSF KR DA+DA I L D  L+G  M++GWGKAVKI
Sbjct:  188 SMDTIALTKGSFDTGDPETTNLYVGNLAPTVTEEVLKAEFGRYGEVYSIKIMWPRSEEERARKRNCGFVSFYKRRDADDARINLDDKQLEGQPMIVGWGKAVKI 291

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BLAST of mRNA_D-dudresnayi_contig1022.257.1 vs. uniprot
Match: A0A225VBK9_9STRA (U2-associated splicing factor n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VBK9_9STRA)

HSP 1 Score: 142 bits (359), Expect = 4.240e-37
Identity = 67/103 (65.05%), Postives = 83/103 (80.58%), Query Frame = 0

Query:   18 LDGGYIEKGSFDNGDPTTTNLYLGNLNPITTEESLYEIFGRYGDINSVKIMWPRTEEEKARKRNCGFVSFKKRADAEDALIELQDIDLDGFKMVLGWGKAVKI 120
            ++G  + KGSFD GDP TTNLY+GNL P  TEE+L   FGRYG++ SVKIMWPR+EEE+ARKRNCGFVSF +R DA+DA I L + +L+G  M++GWGKAVKI
Sbjct:  186 MEGTGMTKGSFDTGDPETTNLYVGNLAPSVTEEALQTEFGRYGEVYSVKIMWPRSEEERARKRNCGFVSFYQRRDADDARINLDNKELEGQPMIVGWGKAVKI 288

The following BLAST results are available for this feature:

BLAST of mRNA_D-dudresnayi_contig1022.257.1 vs. uniprot

BLAST of mRNA_D-dudresnayi_contig1022.257.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S3MEQ8_9STRA	3.490e-41	80.95	Hypothetical protein (Fragment) n=1 Tax=Spumella e...	[more]
A0A7S2DH44_9STRA	1.310e-39	64.21	Hypothetical protein (Fragment) n=1 Tax=Dictyocha ...	[more]
W2PZL8_PHYPN	3.950e-38	67.31	Uncharacterized protein n=18 Tax=Phytophthora TaxI...	[more]
A0A8J5M413_9STRA	8.630e-38	65.38	Uncharacterized protein n=1 Tax=Phytophthora aleat...	[more]
A0A329RQG1_9STRA	1.330e-37	65.38	Uncharacterized protein n=1 Tax=Phytophthora cacto...	[more]
D0N9R1_PHYIT	1.360e-37	65.38	U2-associated splicing factor, putative n=2 Tax=Ph...	[more]
A0A7R9H7B9_TIMPO	2.420e-37	64.29	Hypothetical protein (Fragment) n=1 Tax=Timema pop...	[more]
A0A6G0KVJ4_9STRA	2.540e-37	64.08	Uncharacterized protein n=7 Tax=Phytophthora TaxID...	[more]
A0A484EBR3_BRELC	2.560e-37	66.35	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]
A0A225VBK9_9STRA	4.240e-37	65.05	U2-associated splicing factor n=1 Tax=Phytophthora...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 37..113 e-value: 5.3E-18 score: 75.8
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 38..109 e-value: 3.2E-17 score: 62.1
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 36..121 score: 16.688
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 22..119 e-value: 6.1E-22 score: 79.7
None	No IPR available	PANTHER	PTHR23140:SF0	SWAP/SURP DOMAIN-CONTAINING PROTEIN	coord: 23..120
None	No IPR available	PANTHER	PTHR23140	RNA PROCESSING PROTEIN LD23810P	coord: 23..120
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 27..116

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dudresnayi_contig1022	contig	D-dudresnayi_contig1022:18670..19344 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dudresnayi_contig1022.257.1	mRNA_D-dudresnayi_contig1022.257.1	Desmarestia dudresnayi DdudBR16 monoicous	mRNA	D-dudresnayi_contig1022 18668..19344 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-dudresnayi_contig1022.257.1 ID=prot_D-dudresnayi_contig1022.257.1|Name=mRNA_D-dudresnayi_contig1022.257.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=121bp
NRGERGAGGSENTLNTSLDGGYIEKGSFDNGDPTTTNLYLGNLNPITTEE
SLYEIFGRYGDINSVKIMWPRTEEEKARKRNCGFVSFKKRADAEDALIEL
QDIDLDGFKMVLGWGKAVKIS

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000504	RRM_dom
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf