prot_D-dudresnayi_contig10147.197.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig10147.197.1
Unique Nameprot_D-dudresnayi_contig10147.197.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length125
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig10147.197.1 vs. uniprot
Match: A0A6P0NH41_9CYAN (30S ribosomal protein S12 n=53 Tax=cellular organisms TaxID=131567 RepID=A0A6P0NH41_9CYAN)

HSP 1 Score: 231 bits (588), Expect = 1.810e-76
Identity = 117/124 (94.35%), Postives = 121/124 (97.58%), Query Frame = 0 
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHIIRGTLDTVGVKDRRQGRSKYGMKKPIK 124
            MPTIQQLIRVRR KI+ R KSPALK+CPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHIIRGTLDTVGVKDRRQGRSKYG+KKP+K
Sbjct:    1 MPTIQQLIRVRRTKIKDRGKSPALKNCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHIIRGTLDTVGVKDRRQGRSKYGVKKPVK 124
[Close]
BLAST of mRNA_D-dudresnayi_contig10147.197.1 vs. uniprot
Match: A0A7S6U9Z3_9STRA (30S ribosomal protein S12, chloroplastic n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7S6U9Z3_9STRA)

HSP 1 Score: 221 bits (564), Expect = 8.270e-73
Identity = 110/124 (88.71%), Postives = 118/124 (95.16%), Query Frame = 0 
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHIIRGTLDTVGVKDRRQGRSKYGMKKPIK 124
            MPTIQQL+R  RKK+Q RTKSPALK+CPQRRGVCTRV+TITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYH++RGTLD++GVKDRRQ RSKYG KKP K
Sbjct:    1 MPTIQQLVRTTRKKVQTRTKSPALKNCPQRRGVCTRVYTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHVVRGTLDSIGVKDRRQRRSKYGTKKPRK 124
[Close]
BLAST of mRNA_D-dudresnayi_contig10147.197.1 vs. uniprot
Match: A0A8E5XRI9_9PHAE (30S ribosomal protein S12, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRI9_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 4.780e-72
Identity = 111/122 (90.98%), Postives = 117/122 (95.90%), Query Frame = 0 
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHIIRGTLDTVGVKDRRQGRSKYGMKKP 122
            MPTIQQLIRV RKKIQPRTKSPALKSCPQRRGVCTRV+TI PKKPNSA+RKVARVRLTSGFEVTAYIPG+ H LQEHSVVLLRGGRVKDLPGVRYHIIRGTLD+ GVK+RRQGRSKYG+KKP
Sbjct:    1 MPTIQQLIRVPRKKIQPRTKSPALKSCPQRRGVCTRVYTIAPKKPNSAVRKVARVRLTSGFEVTAYIPGVDHTLQEHSVVLLRGGRVKDLPGVRYHIIRGTLDSGGVKNRRQGRSKYGVKKP 122
[Close]
BLAST of mRNA_D-dudresnayi_contig10147.197.1 vs. uniprot
Match: K9TNW7_9CYAN (30S ribosomal protein S12 n=68 Tax=cellular organisms TaxID=131567 RepID=K9TNW7_9CYAN)

HSP 1 Score: 218 bits (555), Expect = 1.950e-71
Identity = 108/122 (88.52%), Postives = 116/122 (95.08%), Query Frame = 0 
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHIIRGTLDTVGVKDRRQGRSKYGMKKP 122
            MPTIQQLIR  R+KI+ +TKSPALKSCPQRRGVCTRV+T TPKKPNSA+RKVARVRLTSGFEVTAYIPGIGHNLQEHSVV++RGGRVKDLPGVRYHIIRGTLDT GVKDRRQGRSKYG K+P
Sbjct:    1 MPTIQQLIRTERQKIEKKTKSPALKSCPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVMIRGGRVKDLPGVRYHIIRGTLDTAGVKDRRQGRSKYGAKRP 122
[Close]
BLAST of mRNA_D-dudresnayi_contig10147.197.1 vs. uniprot
Match: A0A3G1IVK8_9EUKA (Ribosomal protein S12 n=3 Tax=Glaucocystophyceae TaxID=38254 RepID=A0A3G1IVK8_9EUKA)

HSP 1 Score: 216 bits (550), Expect = 1.130e-70
Identity = 108/122 (88.52%), Postives = 114/122 (93.44%), Query Frame = 0 
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHIIRGTLDTVGVKDRRQGRSKYGMKKP 122
            MPTIQQLIR++RKKI  +TKSPALK CPQRRGVCTRV+T TPKKPNSA+RKVARVRLTSGFEVTAYIPGIGHNLQEHSVVL+RGGRVKDLPGVRYHIIRG LD  GVKDRRQGRSKYG KKP
Sbjct:    1 MPTIQQLIRLKRKKIDKKTKSPALKGCPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIIRGALDAAGVKDRRQGRSKYGTKKP 122
[Close]
BLAST of mRNA_D-dudresnayi_contig10147.197.1 vs. uniprot
Match: K9S9M0_9CYAN (30S ribosomal protein S12 n=17 Tax=cellular organisms TaxID=131567 RepID=K9S9M0_9CYAN)

HSP 1 Score: 215 bits (547), Expect = 3.230e-70
Identity = 107/122 (87.70%), Postives = 115/122 (94.26%), Query Frame = 0 
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHIIRGTLDTVGVKDRRQGRSKYGMKKP 122
            MPTIQQLIR  R+K + +TKSPALKSCPQRRGVCTRV+T TPKKPNSA+RKVARVRLTSGFEVTAYIPGIGHNLQEHSVV++RGGRVKDLPGVRYHIIRGTLDT GVKDRRQGRSKYG K+P
Sbjct:    1 MPTIQQLIRSERQKAKKKTKSPALKSCPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVMIRGGRVKDLPGVRYHIIRGTLDTAGVKDRRQGRSKYGAKRP 122
[Close]
BLAST of mRNA_D-dudresnayi_contig10147.197.1 vs. uniprot
Match: A0A385KE48_9EMBR (30S ribosomal protein S12, chloroplastic n=6 Tax=Embryophyta TaxID=3193 RepID=A0A385KE48_9EMBR)

HSP 1 Score: 214 bits (544), Expect = 8.970e-70
Identity = 105/122 (86.07%), Postives = 117/122 (95.90%), Query Frame = 0 
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHIIRGTLDTVGVKDRRQGRSKYGMKKP 122
            MPTIQQLIR +RK ++ RTKSPAL+ CPQRRGVCTRV+T TPKKPNSA+RKVARV+LTSGFE+TAYIPGIGHNLQEHSVVL+RGGRVKDLPGVRYHI+RGTLDTVGVKDR+QGRSKYG+KKP
Sbjct:    1 MPTIQQLIRNQRKLVKNRTKSPALQGCPQRRGVCTRVYTTTPKKPNSALRKVARVKLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDTVGVKDRKQGRSKYGVKKP 122
[Close]
BLAST of mRNA_D-dudresnayi_contig10147.197.1 vs. uniprot
Match: A0A0P8BUW8_9CYAN (30S ribosomal protein S12 n=11 Tax=cellular organisms TaxID=131567 RepID=A0A0P8BUW8_9CYAN)

HSP 1 Score: 214 bits (544), Expect = 9.270e-70
Identity = 106/122 (86.89%), Postives = 113/122 (92.62%), Query Frame = 0 
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHIIRGTLDTVGVKDRRQGRSKYGMKKP 122
            MPTIQQL+R  RKK   +TKSPALKSCPQRRGVCTRV+T TPKKPNSA+RKVARVRLTSGFEVTAYIPGIGHNLQEHSVV+LRGGRVKDLPGVRYHI+RGTLDT GVKDRRQ RSKYG K+P
Sbjct:    1 MPTIQQLVRSERKKAHKKTKSPALKSCPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVMLRGGRVKDLPGVRYHIVRGTLDTAGVKDRRQSRSKYGAKRP 122
[Close]
BLAST of mRNA_D-dudresnayi_contig10147.197.1 vs. uniprot
Match: RR12_ANTAG (30S ribosomal protein S12, chloroplastic n=5 Tax=Embryophyta TaxID=3193 RepID=RR12_ANTAG)

HSP 1 Score: 213 bits (543), Expect = 1.270e-69
Identity = 104/122 (85.25%), Postives = 117/122 (95.90%), Query Frame = 0 
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHIIRGTLDTVGVKDRRQGRSKYGMKKP 122
            MPTIQQLIR +R+ ++ RTKSPAL+ CPQRRGVCTRV+T TPKKPNSA+RKVARV+LTSGFE+TAYIPGIGHNLQEHSVVL+RGGRVKDLPGVRYHI+RGTLDTVGVKDR+QGRSKYG+KKP
Sbjct:    1 MPTIQQLIRSKRQLVKSRTKSPALQGCPQRRGVCTRVYTTTPKKPNSALRKVARVKLTSGFEITAYIPGIGHNLQEHSVVLVRGGRVKDLPGVRYHIVRGTLDTVGVKDRKQGRSKYGVKKP 122
[Close]
BLAST of mRNA_D-dudresnayi_contig10147.197.1 vs. uniprot
Match: D8FXL5_9CYAN (30S ribosomal protein S12 n=43 Tax=Cyanobacteria TaxID=1117 RepID=D8FXL5_9CYAN)

HSP 1 Score: 213 bits (543), Expect = 1.550e-69
Identity = 106/122 (86.89%), Postives = 115/122 (94.26%), Query Frame = 0 
Query:    1 MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHIIRGTLDTVGVKDRRQGRSKYGMKKP 122
            MPTIQQLIR  R++ Q +TKSPALKSCPQRRGVCTRV+T TPKKPNSA+RKVARVRLTSGFEVTAYIPGIGHNLQEHSVV++RGGRVKDLPGVRYHIIRGTLDT GVKDR+QGRSKYG K+P
Sbjct:    1 MPTIQQLIRSAREETQKKTKSPALKSCPQRRGVCTRVYTTTPKKPNSALRKVARVRLTSGFEVTAYIPGIGHNLQEHSVVMIRGGRVKDLPGVRYHIIRGTLDTAGVKDRKQGRSKYGAKRP 122
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10147.197.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6P0NH41_9CYAN1.810e-7694.3530S ribosomal protein S12 n=53 Tax=cellular organi... [more]
A0A7S6U9Z3_9STRA8.270e-7388.7130S ribosomal protein S12, chloroplastic n=1 Tax=S... [more]
A0A8E5XRI9_9PHAE4.780e-7290.9830S ribosomal protein S12, chloroplastic n=1 Tax=I... [more]
K9TNW7_9CYAN1.950e-7188.5230S ribosomal protein S12 n=68 Tax=cellular organi... [more]
A0A3G1IVK8_9EUKA1.130e-7088.52Ribosomal protein S12 n=3 Tax=Glaucocystophyceae T... [more]
K9S9M0_9CYAN3.230e-7087.7030S ribosomal protein S12 n=17 Tax=cellular organi... [more]
A0A385KE48_9EMBR8.970e-7086.0730S ribosomal protein S12, chloroplastic n=6 Tax=E... [more]
A0A0P8BUW8_9CYAN9.270e-7086.8930S ribosomal protein S12 n=11 Tax=cellular organi... [more]
RR12_ANTAG1.270e-6985.2530S ribosomal protein S12, chloroplastic n=5 Tax=E... [more]
D8FXL5_9CYAN1.550e-6986.8930S ribosomal protein S12 n=43 Tax=Cyanobacteria T... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006032Ribosomal protein S12/S23PRINTSPR01034RIBOSOMALS12coord: 27..42
score: 73.18
coord: 58..77
score: 75.97
coord: 94..110
score: 65.69
coord: 110..122
score: 71.79
coord: 77..94
score: 86.11
coord: 42..57
score: 86.63
IPR006032Ribosomal protein S12/S23PIRSFPIRSF002133RPS12p_RPS12a_RPS23e_RPS12ocoord: 1..124
e-value: 2.4E-53
score: 176.9
IPR006032Ribosomal protein S12/S23PFAMPF00164Ribosom_S12_S23coord: 12..122
e-value: 4.3E-42
score: 142.3
IPR006032Ribosomal protein S12/S23PANTHERPTHR1165230S RIBOSOMAL PROTEIN S12 FAMILY MEMBERcoord: 1..122
IPR006032Ribosomal protein S12/S23PROSITEPS00055RIBOSOMAL_S12coord: 43..50
IPR005679Ribosomal protein S12, bacterial-typeTIGRFAMTIGR00981TIGR00981coord: 1..122
e-value: 6.7E-68
score: 224.2
IPR005679Ribosomal protein S12, bacterial-typeHAMAPMF_00403_BRibosomal_S12_Bcoord: 1..124
score: 39.56
NoneNo IPR availableGENE3D2.40.50.140coord: 1..124
e-value: 2.4E-63
score: 213.6
NoneNo IPR availablePANTHERPTHR11652:SF128S RIBOSOMAL PROTEIN S12, MITOCHONDRIALcoord: 1..122
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 2..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10147contigD-dudresnayi_contig10147:3278..3652 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10147.197.1mRNA_D-dudresnayi_contig10147.197.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig10147 3005..3652 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig10147.197.1 ID=prot_D-dudresnayi_contig10147.197.1|Name=mRNA_D-dudresnayi_contig10147.197.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=125bp
MPTIQQLIRVRRKKIQPRTKSPALKSCPQRRGVCTRVHTITPKKPNSAIR
KVARVRLTSGFEVTAYIPGIGHNLQEHSVVLLRGGRVKDLPGVRYHIIRG
TLDTVGVKDRRQGRSKYGMKKPIK*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006032Ribosomal_S12/S23
IPR005679Ribosomal_S12_bac
IPR012340NA-bd_OB-fold