prot_D-dudresnayi_contig10046.80.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_D-dudresnayi_contig10046.80.1
Unique Nameprot_D-dudresnayi_contig10046.80.1
Typepolypeptide
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length109
Homology
[Close]
BLAST of mRNA_D-dudresnayi_contig10046.80.1 vs. uniprot
Match: A0A7S3H487_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H487_9STRA)

HSP 1 Score: 145 bits (367), Expect = 3.790e-43
Identity = 69/95 (72.63%), Postives = 79/95 (83.16%), Query Frame = 0 
Query:   15 YTGKTKFQRLIDNKIDLHSYKISTVLVDPPRSGLDQNTCILLSKFDKIIYISCNPETLARDVAILSATHRVQRVAAFDQFPYTHHLEGGVFLVKK 109
            YT    FQRL +N IDL SYKI+TVLVDPPR+GLD +TC ++S+F KI+YISCNPETLARDV  L  TH V RVAAFDQFPYTHHLEGGVFLV++
Sbjct:    1 YTNHKPFQRLKENNIDLQSYKITTVLVDPPRAGLDADTCKMISQFAKIVYISCNPETLARDVTKLKETHDVVRVAAFDQFPYTHHLEGGVFLVRR 95
[Close]
BLAST of mRNA_D-dudresnayi_contig10046.80.1 vs. uniprot
Match: UPI000B361667 (tRNA (uridine(54)-C5)-methyltransferase TrmA n=1 Tax=Thaumasiovibrio subtropicus TaxID=1891207 RepID=UPI000B361667)

HSP 1 Score: 147 bits (371), Expect = 7.580e-41
Identity = 63/109 (57.80%), Postives = 87/109 (79.82%), Query Frame = 0 
Query:    1 IKVARLSSEEFTDAYTGKTKFQRLIDNKIDLHSYKISTVLVDPPRSGLDQNTCILLSKFDKIIYISCNPETLARDVAILSATHRVQRVAAFDQFPYTHHLEGGVFLVKK 109
            +++ R+S+E+FTDA  GK +F+RL DN IDL SY  +T+ VDPPR+G+D+ TC ++  +++I+YISCNPETL  ++AILS THR+ R A FDQFPYTHH+E GVFL +K
Sbjct:  260 VQIVRMSAEDFTDAMAGKREFRRLKDNNIDLQSYNCNTIFVDPPRAGMDEGTCRMVQGYERIMYISCNPETLKENLAILSETHRITRFALFDQFPYTHHMEAGVFLERK 368
[Close]
BLAST of mRNA_D-dudresnayi_contig10046.80.1 vs. uniprot
Match: A0A0F6A3Z9_9GAMM (tRNA/tmRNA (uracil-C(5))-methyltransferase n=8 Tax=Pseudoalteromonas TaxID=53246 RepID=A0A0F6A3Z9_9GAMM)

HSP 1 Score: 146 bits (368), Expect = 1.990e-40
Identity = 68/109 (62.39%), Postives = 83/109 (76.15%), Query Frame = 0 
Query:    1 IKVARLSSEEFTDAYTGKTKFQRLIDNKIDLHSYKISTVLVDPPRSGLDQNTCILLSKFDKIIYISCNPETLARDVAILSATHRVQRVAAFDQFPYTHHLEGGVFLVKK 109
            + + R+SSEEFTDA  GK  F RL  N IDL SY   T+LVDPPR+G+D+ TC L+S +D IIYISCNP+TL RD+ ILS TH + R+A FDQFPYTHH+E GVFL +K
Sbjct:  259 LDIIRMSSEEFTDAMQGKRNFSRL--NGIDLQSYNCQTILVDPPRAGMDELTCRLVSNYDNIIYISCNPDTLERDLEILSETHNISRIAIFDQFPYTHHVESGVFLTRK 365
[Close]
BLAST of mRNA_D-dudresnayi_contig10046.80.1 vs. uniprot
Match: A0A1X3CUZ2_9NEIS (tRNA/tmRNA (uracil-C(5))-methyltransferase n=3 Tax=Neisseria TaxID=482 RepID=A0A1X3CUZ2_9NEIS)

HSP 1 Score: 145 bits (365), Expect = 5.310e-40
Identity = 65/109 (59.63%), Postives = 88/109 (80.73%), Query Frame = 0 
Query:    1 IKVARLSSEEFTDAYTGKTKFQRLIDNKIDLHSYKISTVLVDPPRSGLDQNTCILLSKFDKIIYISCNPETLARDVAILSATHRVQRVAAFDQFPYTHHLEGGVFLVKK 109
            +K+ARLS+EEFT+AYTG  +F+RL +  I L  Y+ ST+ VDPPR+G+DQ T  L+ +F+ IIYISCNPETL +++ +LSATH V+R+A FDQFP+THH+E GV+L KK
Sbjct:  255 VKIARLSAEEFTEAYTGAREFRRLKEQGISLDDYRFSTIFVDPPRAGIDQETLKLVQQFENIIYISCNPETLHQNLEVLSATHHVRRMALFDQFPFTHHIESGVWLEKK 363
[Close]
BLAST of mRNA_D-dudresnayi_contig10046.80.1 vs. uniprot
Match: UPI000B3574FC (tRNA (uridine(54)-C5)-methyltransferase TrmA n=1 Tax=Thaumasiovibrio occultus TaxID=1891184 RepID=UPI000B3574FC)

HSP 1 Score: 144 bits (363), Expect = 1.170e-39
Identity = 62/109 (56.88%), Postives = 87/109 (79.82%), Query Frame = 0 
Query:    1 IKVARLSSEEFTDAYTGKTKFQRLIDNKIDLHSYKISTVLVDPPRSGLDQNTCILLSKFDKIIYISCNPETLARDVAILSATHRVQRVAAFDQFPYTHHLEGGVFLVKK 109
            +++ R+S+E+FT+A  GK +F+RL DN IDL SY  +T+ VDPPRSG+D++TC ++  +++I+YISCNPETL  ++ ILS THR+ R A FDQFPYTHH+E GVFL +K
Sbjct:  260 VQIIRMSAEDFTEAMEGKREFRRLKDNNIDLQSYNCNTIFVDPPRSGMDEDTCRMVQGYERIMYISCNPETLKENLNILSETHRITRFALFDQFPYTHHMEAGVFLERK 368
[Close]
BLAST of mRNA_D-dudresnayi_contig10046.80.1 vs. uniprot
Match: A0A166UG28_9GAMM (tRNA/tmRNA (uracil-C(5))-methyltransferase n=9 Tax=Pseudoalteromonas TaxID=53246 RepID=A0A166UG28_9GAMM)

HSP 1 Score: 144 bits (362), Expect = 1.540e-39
Identity = 67/109 (61.47%), Postives = 83/109 (76.15%), Query Frame = 0 
Query:    1 IKVARLSSEEFTDAYTGKTKFQRLIDNKIDLHSYKISTVLVDPPRSGLDQNTCILLSKFDKIIYISCNPETLARDVAILSATHRVQRVAAFDQFPYTHHLEGGVFLVKK 109
            + + R+SSEEFTDA  GK +F RL  N IDL SY   T+LVDPPR+G+D+ TC L+S +D IIYISCNP+TL RD+  LS TH + R+A FDQFPYTHH+E GVFL +K
Sbjct:  259 LDIIRMSSEEFTDAMQGKRQFSRL--NGIDLKSYNCQTILVDPPRAGMDELTCQLVSNYDNIIYISCNPDTLERDLETLSKTHNIARIAIFDQFPYTHHVESGVFLTRK 365
[Close]
BLAST of mRNA_D-dudresnayi_contig10046.80.1 vs. uniprot
Match: A0A2T3I5X4_9GAMM (tRNA/tmRNA (uracil-C(5))-methyltransferase n=11 Tax=Photobacterium damselae TaxID=38293 RepID=A0A2T3I5X4_9GAMM)

HSP 1 Score: 144 bits (362), Expect = 1.640e-39
Identity = 62/109 (56.88%), Postives = 86/109 (78.90%), Query Frame = 0 
Query:    1 IKVARLSSEEFTDAYTGKTKFQRLIDNKIDLHSYKISTVLVDPPRSGLDQNTCILLSKFDKIIYISCNPETLARDVAILSATHRVQRVAAFDQFPYTHHLEGGVFLVKK 109
            +++ R+S+EEFT+A  G+ +F+RL DN IDL SY  +T+ VDPPRSG+D+ TC ++  +++I+YISCNPETL  ++ ILS THR+ R A FDQFPYTHH+E GVFL +K
Sbjct:  260 VQIIRMSAEEFTEAMEGRREFRRLKDNNIDLQSYNCNTIFVDPPRSGMDEGTCRMVQGYERIMYISCNPETLKENLDILSETHRITRFALFDQFPYTHHMEAGVFLERK 368
[Close]
BLAST of mRNA_D-dudresnayi_contig10046.80.1 vs. uniprot
Match: TRMA_NEIMB (tRNA/tmRNA (uracil-C(5))-methyltransferase n=141 Tax=Neisseriaceae TaxID=481 RepID=TRMA_NEIMB)

HSP 1 Score: 142 bits (359), Expect = 4.040e-39
Identity = 67/109 (61.47%), Postives = 84/109 (77.06%), Query Frame = 0 
Query:    1 IKVARLSSEEFTDAYTGKTKFQRLIDNKIDLHSYKISTVLVDPPRSGLDQNTCILLSKFDKIIYISCNPETLARDVAILSATHRVQRVAAFDQFPYTHHLEGGVFLVKK 109
            IK+ARLS+EEFT+AYTGK +F+RL D  I L  Y  ST+ VDPPR+G+D+ T  L+S+FD IIYISCNPETL  ++  L+ TH V+R A FDQFP+THH+E GV L KK
Sbjct:  252 IKIARLSAEEFTEAYTGKREFKRLKDGGIALTDYAFSTIFVDPPRAGIDEETLKLVSQFDNIIYISCNPETLRANLDTLAETHAVERAALFDQFPFTHHIESGVLLKKK 360
[Close]
BLAST of mRNA_D-dudresnayi_contig10046.80.1 vs. uniprot
Match: A0A090QZZ7_9GAMM (tRNA (Uracil54-C5-)-methyltransferase n=1 Tax=Photobacterium aphoticum TaxID=754436 RepID=A0A090QZZ7_9GAMM)

HSP 1 Score: 139 bits (351), Expect = 4.300e-39
Identity = 59/109 (54.13%), Postives = 84/109 (77.06%), Query Frame = 0 
Query:    1 IKVARLSSEEFTDAYTGKTKFQRLIDNKIDLHSYKISTVLVDPPRSGLDQNTCILLSKFDKIIYISCNPETLARDVAILSATHRVQRVAAFDQFPYTHHLEGGVFLVKK 109
            +++ R+S+E+FTDA  G+ +F+RL D  +DL SY  +T+ VDPPRSG+D+ TC ++  +D+I+YISCNP+TL  ++ ILS THR+ R A FDQFPYTHH+E GV L +K
Sbjct:  139 VQIIRMSAEDFTDAMEGRREFRRLKDQNVDLQSYNCNTIFVDPPRSGMDEGTCRMVQGYDRIMYISCNPDTLKENLDILSETHRITRFALFDQFPYTHHMEAGVLLERK 247
[Close]
BLAST of mRNA_D-dudresnayi_contig10046.80.1 vs. uniprot
Match: UPI001EF2E4B2 (tRNA (uridine(54)-C5)-methyltransferase TrmA n=1 Tax=Vibrio sp. Of7-15 TaxID=2724879 RepID=UPI001EF2E4B2)

HSP 1 Score: 142 bits (358), Expect = 6.420e-39
Identity = 61/109 (55.96%), Postives = 85/109 (77.98%), Query Frame = 0 
Query:    1 IKVARLSSEEFTDAYTGKTKFQRLIDNKIDLHSYKISTVLVDPPRSGLDQNTCILLSKFDKIIYISCNPETLARDVAILSATHRVQRVAAFDQFPYTHHLEGGVFLVKK 109
            +++ R+S+E+FTDA  GK +F+RL D  IDL SY  +T+ VDPPRSG+D+ TC ++  +++I+YISCNP+TL  ++ ILS THR+ R A FDQFPYTHH+E GVFL +K
Sbjct:  260 VQIIRMSAEDFTDAMEGKREFRRLKDQNIDLQSYNCNTIFVDPPRSGMDEGTCRMVQGYERIMYISCNPDTLKENLEILSETHRITRFALFDQFPYTHHMEAGVFLERK 368
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10046.80.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S3H487_9STRA3.790e-4372.63Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
UPI000B3616677.580e-4157.80tRNA (uridine(54)-C5)-methyltransferase TrmA n=1 T... [more]
A0A0F6A3Z9_9GAMM1.990e-4062.39tRNA/tmRNA (uracil-C(5))-methyltransferase n=8 Tax... [more]
A0A1X3CUZ2_9NEIS5.310e-4059.63tRNA/tmRNA (uracil-C(5))-methyltransferase n=3 Tax... [more]
UPI000B3574FC1.170e-3956.88tRNA (uridine(54)-C5)-methyltransferase TrmA n=1 T... [more]
A0A166UG28_9GAMM1.540e-3961.47tRNA/tmRNA (uracil-C(5))-methyltransferase n=9 Tax... [more]
A0A2T3I5X4_9GAMM1.640e-3956.88tRNA/tmRNA (uracil-C(5))-methyltransferase n=11 Ta... [more]
TRMA_NEIMB4.040e-3961.47tRNA/tmRNA (uracil-C(5))-methyltransferase n=141 T... [more]
A0A090QZZ7_9GAMM4.300e-3954.13tRNA (Uracil54-C5-)-methyltransferase n=1 Tax=Phot... [more]
UPI001EF2E4B26.420e-3955.96tRNA (uridine(54)-C5)-methyltransferase TrmA n=1 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010280(Uracil-5)-methyltransferase familyPFAMPF05958tRNA_U5-meth_trcoord: 1..109
e-value: 1.7E-46
score: 158.9
IPR010280(Uracil-5)-methyltransferase familyPROSITEPS51687SAM_MT_RNA_M5Ucoord: 1..109
score: 26.58
NoneNo IPR availableGENE3D3.40.50.150coord: 1..107
e-value: 1.4E-27
score: 98.2
NoneNo IPR availablePANTHERPTHR47790:SF2TRNA/TMRNA (URACIL-C(5))-METHYLTRANSFERASEcoord: 1..109
IPR011869tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmAPANTHERPTHR47790FAMILY NOT NAMEDcoord: 1..109
IPR030390RNA methyltransferase TrmA, active sitePROSITEPS01230TRMA_1coord: 42..71
IPR030391RNA methyltransferase TrmA, conserved sitePROSITEPS01231TRMA_2coord: 91..101
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 30..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig10046contigD-dudresnayi_contig10046:3..329 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig10046.80.1mRNA_D-dudresnayi_contig10046.80.1Desmarestia dudresnayi DdudBR16 monoicousmRNAD-dudresnayi_contig10046 3..329 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_D-dudresnayi_contig10046.80.1 ID=prot_D-dudresnayi_contig10046.80.1|Name=mRNA_D-dudresnayi_contig10046.80.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=109bp
IKVARLSSEEFTDAYTGKTKFQRLIDNKIDLHSYKISTVLVDPPRSGLDQ
NTCILLSKFDKIIYISCNPETLARDVAILSATHRVQRVAAFDQFPYTHHL
EGGVFLVKK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010280U5_MeTrfase_fam
IPR011869TrmA_MeTrfase
IPR030390MeTrfase_TrmA_AS
IPR030391MeTrfase_TrmA_CS
IPR029063SAM-dependent_MTases