mRNA_D-dudresnayi_contig9990.28797.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: D8LML1_ECTSI (Heterogeneous nuclear ribonucleoprotein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LML1_ECTSI) HSP 1 Score: 182 bits (461), Expect = 4.500e-54 Identity = 122/156 (78.21%), Postives = 122/156 (78.21%), Query Frame = 1 Query: 55 MAGVQGVGGVNGQVPQQMAPQQGIMGQSXXXXXXXXXXXXM----------VGGXXXXXXXXXXXSMGXXXXXX-GMGDYPLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRGDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRR 489 M GVQGVGGVNGQVPQQMAPQQGIM Q XXXXXXXXXXXX VG XXXXX MG MGDY LEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMV R DGRGAGEAIVVLPN MEMQMALSRDKQHMGRR Sbjct: 1 MGGVQGVGGVNGQVPQQMAPQQGIMSQGXXXXXXXXXXXXXXXXXXXXXGGVGXXXXXXNVQGAGMMGGGAMSTMSMGDYSLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVTRADGRGAGEAIVVLPNLMEMQMALSRDKQHMGRR 156
BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A836CJZ5_9STRA (RRM domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ5_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.320e-35 Identity = 60/75 (80.00%), Postives = 70/75 (93.33%), Query Frame = 1 Query: 265 LEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRGDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRR 489 LE+VLGPFPCVRLRG+PFEAT+DDVLRFFQGL +DVVM++RGDGRGAGEA+V+ NHM++ MALSRDKQHMGRR Sbjct: 28 LEEVLGPFPCVRLRGMPFEATVDDVLRFFQGLTVVDVVMILRGDGRGAGEALVLFANHMDLNMALSRDKQHMGRR 102
BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A7S2V6E5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6E5_9STRA) HSP 1 Score: 123 bits (309), Expect = 2.220e-32 Identity = 61/89 (68.54%), Postives = 71/89 (79.78%), Query Frame = 1 Query: 223 MGXXXXXXGMGDYPLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRGDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRR 489 MG G D PLED+LGPFPCVR+RGLPFEAT++DV+ FFQGLV LDVV+ VRGDGRG+GEA VV N M+ QMAL RD+Q+MGRR Sbjct: 81 MGMGVIGGGQRD-PLEDILGPFPCVRIRGLPFEATMEDVIMFFQGLVVLDVVLAVRGDGRGSGEAFVVFSNPMDCQMALQRDRQNMGRR 168
BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A7S4T0I6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T0I6_9STRA) HSP 1 Score: 106 bits (264), Expect = 6.380e-25 Identity = 54/78 (69.23%), Postives = 61/78 (78.21%), Query Frame = 1 Query: 262 PLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRG--DGRGAGEAIVVLPNHMEMQMALSRDKQHMGRR 489 PLE VLGPFPC RLRGLPFEA+I+DV+ FFQGLV LD V+V G DG G+GEA VV NHM+ QMAL RD +MGRR Sbjct: 106 PLEVVLGPFPCARLRGLPFEASIEDVVVFFQGLVILDAVVVPSGNSDGMGSGEAFVVFANHMDFQMALQRDHHNMGRR 183
BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A7S2WJG1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WJG1_9STRA) HSP 1 Score: 107 bits (267), Expect = 1.740e-24 Identity = 53/81 (65.43%), Postives = 61/81 (75.31%), Query Frame = 1 Query: 247 GMGDYPLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRGDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRR 489 G + PLE VLGPFPC RLRGLPF+A +DVL FFQGLV LDVV+V GRG+GEA VV PN M+ Q+AL RD+Q MG R Sbjct: 106 GTSNDPLEAVLGPFPCARLRGLPFDAMPEDVLAFFQGLVVLDVVVVANSFGRGSGEAFVVFPNPMDFQVALQRDRQSMGHR 186
BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A7S4NBH0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NBH0_9STRA) HSP 1 Score: 100 bits (249), Expect = 3.360e-23 Identity = 49/77 (63.64%), Postives = 60/77 (77.92%), Query Frame = 1 Query: 265 LEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRGDG--RGAGEAIVVLPNHMEMQMALSRDKQHMGRR 489 LE VLG FPCVRLRGLP+ A+++DVL FFQGLV LD+V+V D +G GEA V+L NHM+ QMAL RD+Q+MG R Sbjct: 113 LEQVLGVFPCVRLRGLPYNASVEDVLIFFQGLVVLDIVVVASADDERKGTGEAFVILGNHMDFQMALQRDRQNMGHR 189
BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A7S2A3T8_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A3T8_TRICV) HSP 1 Score: 102 bits (253), Expect = 3.820e-23 Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = 1 Query: 262 PLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRGDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRR 489 PLE VLGPFPC RLRGLPF+A+++DVL FFQGLV LDVV+V +G+GEA VV N M+ QMAL RD+Q MG R Sbjct: 104 PLEAVLGPFPCARLRGLPFDASLEDVLVFFQGLVVLDVVVVSDSSVKGSGEAFVVFANPMDFQMALQRDRQSMGHR 179
BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A7S2U907_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U907_9STRA) HSP 1 Score: 100 bits (249), Expect = 9.290e-23 Identity = 56/92 (60.87%), Postives = 63/92 (68.48%), Query Frame = 1 Query: 220 SMGXXXXXXGMGDYPLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMV--VRGDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRR 489 S+G G PLE VLGPFPCV LRGLPFEA+++DVL FFQGLV LDVV+ V DG G GEA VV N M+ QMAL RD+Q MG R Sbjct: 77 SVGMSALLLGASMDPLEAVLGPFPCVCLRGLPFEASLEDVLCFFQGLVVLDVVVTGSVPIDGHGGGEAFVVFANPMDFQMALQRDRQSMGGR 168
BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A7R9WKK8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WKK8_9STRA) HSP 1 Score: 100 bits (249), Expect = 4.600e-22 Identity = 49/77 (63.64%), Postives = 60/77 (77.92%), Query Frame = 1 Query: 265 LEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRGDG--RGAGEAIVVLPNHMEMQMALSRDKQHMGRR 489 LE VLG FPCVRLRGLP+ A+++DVL FFQGLV LD+V+V D +G GEA V+L NHM+ QMAL RD+Q+MG R Sbjct: 95 LEQVLGVFPCVRLRGLPYNASVEDVLIFFQGLVVLDIVVVASADDERKGTGEAFVILGNHMDFQMALQRDRQNMGHR 171
BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A7S4NCM0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NCM0_9STRA) HSP 1 Score: 100 bits (249), Expect = 5.540e-22 Identity = 49/77 (63.64%), Postives = 60/77 (77.92%), Query Frame = 1 Query: 265 LEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRGDG--RGAGEAIVVLPNHMEMQMALSRDKQHMGRR 489 LE VLG FPCVRLRGLP+ A+++DVL FFQGLV LD+V+V D +G GEA V+L NHM+ QMAL RD+Q+MG R Sbjct: 113 LEQVLGVFPCVRLRGLPYNASVEDVLIFFQGLVVLDIVVVASADDERKGTGEAFVILGNHMDFQMALQRDRQNMGHR 189 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9990.28797.1 >prot_D-dudresnayi_contig9990.28797.1 ID=prot_D-dudresnayi_contig9990.28797.1|Name=mRNA_D-dudresnayi_contig9990.28797.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=163bp GGIGVSKGSNGQSLGVSHMAGVQGVGGVNGQVPQQMAPQQGIMGQSMGQGback to top mRNA from alignment at D-dudresnayi_contig9990:4637..10565+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9990.28797.1 ID=mRNA_D-dudresnayi_contig9990.28797.1|Name=mRNA_D-dudresnayi_contig9990.28797.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=5929bp|location=Sequence derived from alignment at D-dudresnayi_contig9990:4637..10565+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9990:4637..10565+ >mRNA_D-dudresnayi_contig9990.28797.1 ID=mRNA_D-dudresnayi_contig9990.28797.1|Name=mRNA_D-dudresnayi_contig9990.28797.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=978bp|location=Sequence derived from alignment at D-dudresnayi_contig9990:4637..10565+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |