prot_D-dudresnayi_contig9990.28797.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-dudresnayi_contig9990.28797.1
Unique Name	prot_D-dudresnayi_contig9990.28797.1
Type	polypeptide
Organism	Desmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length	163

Homology

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BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: D8LML1_ECTSI (Heterogeneous nuclear ribonucleoprotein, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LML1_ECTSI)

HSP 1 Score: 182 bits (461), Expect = 4.500e-54
Identity = 122/156 (78.21%), Postives = 122/156 (78.21%), Query Frame = 0

Query:   19 MAGVQGVGGVNGQVPQQMAPQQGIMGQSXXXXXXXXXXXXM----------VGGXXXXXXXXXXXSMGXXXXXX-GMGDYPLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRGDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRR 163
            M GVQGVGGVNGQVPQQMAPQQGIM Q XXXXXXXXXXXX           VG XXXXX       MG        MGDY LEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMV R DGRGAGEAIVVLPN MEMQMALSRDKQHMGRR
Sbjct:    1 MGGVQGVGGVNGQVPQQMAPQQGIMSQGXXXXXXXXXXXXXXXXXXXXXGGVGXXXXXXNVQGAGMMGGGAMSTMSMGDYSLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVTRADGRGAGEAIVVLPNLMEMQMALSRDKQHMGRR 156

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BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A836CJZ5_9STRA (RRM domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ5_9STRA)

HSP 1 Score: 132 bits (332), Expect = 1.320e-35
Identity = 60/75 (80.00%), Postives = 70/75 (93.33%), Query Frame = 0

Query:   89 LEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRGDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRR 163
            LE+VLGPFPCVRLRG+PFEAT+DDVLRFFQGL  +DVVM++RGDGRGAGEA+V+  NHM++ MALSRDKQHMGRR
Sbjct:   28 LEEVLGPFPCVRLRGMPFEATVDDVLRFFQGLTVVDVVMILRGDGRGAGEALVLFANHMDLNMALSRDKQHMGRR 102

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BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A7S2V6E5_9STRA (Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6E5_9STRA)

HSP 1 Score: 123 bits (309), Expect = 2.220e-32
Identity = 61/89 (68.54%), Postives = 71/89 (79.78%), Query Frame = 0

Query:   75 MGXXXXXXGMGDYPLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRGDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRR 163
            MG      G  D PLED+LGPFPCVR+RGLPFEAT++DV+ FFQGLV LDVV+ VRGDGRG+GEA VV  N M+ QMAL RD+Q+MGRR
Sbjct:   81 MGMGVIGGGQRD-PLEDILGPFPCVRIRGLPFEATMEDVIMFFQGLVVLDVVLAVRGDGRGSGEAFVVFSNPMDCQMALQRDRQNMGRR 168

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BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A7S4T0I6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T0I6_9STRA)

HSP 1 Score: 106 bits (264), Expect = 6.380e-25
Identity = 54/78 (69.23%), Postives = 61/78 (78.21%), Query Frame = 0

Query:   88 PLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRG--DGRGAGEAIVVLPNHMEMQMALSRDKQHMGRR 163
            PLE VLGPFPC RLRGLPFEA+I+DV+ FFQGLV LD V+V  G  DG G+GEA VV  NHM+ QMAL RD  +MGRR
Sbjct:  106 PLEVVLGPFPCARLRGLPFEASIEDVVVFFQGLVILDAVVVPSGNSDGMGSGEAFVVFANHMDFQMALQRDHHNMGRR 183

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BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A7S2WJG1_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WJG1_9STRA)

HSP 1 Score: 107 bits (267), Expect = 1.740e-24
Identity = 53/81 (65.43%), Postives = 61/81 (75.31%), Query Frame = 0

Query:   83 GMGDYPLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRGDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRR 163
            G  + PLE VLGPFPC RLRGLPF+A  +DVL FFQGLV LDVV+V    GRG+GEA VV PN M+ Q+AL RD+Q MG R
Sbjct:  106 GTSNDPLEAVLGPFPCARLRGLPFDAMPEDVLAFFQGLVVLDVVVVANSFGRGSGEAFVVFPNPMDFQVALQRDRQSMGHR 186

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BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A7S4NBH0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NBH0_9STRA)

HSP 1 Score: 100 bits (249), Expect = 3.360e-23
Identity = 49/77 (63.64%), Postives = 60/77 (77.92%), Query Frame = 0

Query:   89 LEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRGDG--RGAGEAIVVLPNHMEMQMALSRDKQHMGRR 163
            LE VLG FPCVRLRGLP+ A+++DVL FFQGLV LD+V+V   D   +G GEA V+L NHM+ QMAL RD+Q+MG R
Sbjct:  113 LEQVLGVFPCVRLRGLPYNASVEDVLIFFQGLVVLDIVVVASADDERKGTGEAFVILGNHMDFQMALQRDRQNMGHR 189

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BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A7S2A3T8_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2A3T8_TRICV)

HSP 1 Score: 102 bits (253), Expect = 3.820e-23
Identity = 50/76 (65.79%), Postives = 59/76 (77.63%), Query Frame = 0

Query:   88 PLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRGDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRR 163
            PLE VLGPFPC RLRGLPF+A+++DVL FFQGLV LDVV+V     +G+GEA VV  N M+ QMAL RD+Q MG R
Sbjct:  104 PLEAVLGPFPCARLRGLPFDASLEDVLVFFQGLVVLDVVVVSDSSVKGSGEAFVVFANPMDFQMALQRDRQSMGHR 179

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BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A7S2U907_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U907_9STRA)

HSP 1 Score: 100 bits (249), Expect = 9.290e-23
Identity = 56/92 (60.87%), Postives = 63/92 (68.48%), Query Frame = 0

Query:   74 SMGXXXXXXGMGDYPLEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMV--VRGDGRGAGEAIVVLPNHMEMQMALSRDKQHMGRR 163
            S+G      G    PLE VLGPFPCV LRGLPFEA+++DVL FFQGLV LDVV+   V  DG G GEA VV  N M+ QMAL RD+Q MG R
Sbjct:   77 SVGMSALLLGASMDPLEAVLGPFPCVCLRGLPFEASLEDVLCFFQGLVVLDVVVTGSVPIDGHGGGEAFVVFANPMDFQMALQRDRQSMGGR 168

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BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A7R9WKK8_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WKK8_9STRA)

HSP 1 Score: 100 bits (249), Expect = 4.600e-22
Identity = 49/77 (63.64%), Postives = 60/77 (77.92%), Query Frame = 0

Query:   89 LEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRGDG--RGAGEAIVVLPNHMEMQMALSRDKQHMGRR 163
            LE VLG FPCVRLRGLP+ A+++DVL FFQGLV LD+V+V   D   +G GEA V+L NHM+ QMAL RD+Q+MG R
Sbjct:   95 LEQVLGVFPCVRLRGLPYNASVEDVLIFFQGLVVLDIVVVASADDERKGTGEAFVILGNHMDFQMALQRDRQNMGHR 171

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BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Match: A0A7S4NCM0_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NCM0_9STRA)

HSP 1 Score: 100 bits (249), Expect = 5.540e-22
Identity = 49/77 (63.64%), Postives = 60/77 (77.92%), Query Frame = 0

Query:   89 LEDVLGPFPCVRLRGLPFEATIDDVLRFFQGLVPLDVVMVVRGDG--RGAGEAIVVLPNHMEMQMALSRDKQHMGRR 163
            LE VLG FPCVRLRGLP+ A+++DVL FFQGLV LD+V+V   D   +G GEA V+L NHM+ QMAL RD+Q+MG R
Sbjct:  113 LEQVLGVFPCVRLRGLPYNASVEDVLIFFQGLVVLDIVVVASADDERKGTGEAFVILGNHMDFQMALQRDRQNMGHR 189

The following BLAST results are available for this feature:

BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot

BLAST of mRNA_D-dudresnayi_contig9990.28797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LML1_ECTSI	4.500e-54	78.21	Heterogeneous nuclear ribonucleoprotein, putative ...	[more]
A0A836CJZ5_9STRA	1.320e-35	80.00	RRM domain-containing protein (Fragment) n=1 Tax=T...	[more]
A0A7S2V6E5_9STRA	2.220e-32	68.54	Hypothetical protein (Fragment) n=2 Tax=Fibrocapsa...	[more]
A0A7S4T0I6_9STRA	6.380e-25	69.23	Hypothetical protein (Fragment) n=2 Tax=Ditylum br...	[more]
A0A7S2WJG1_9STRA	1.740e-24	65.43	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A7S4NBH0_9STRA	3.360e-23	63.64	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A7S2A3T8_TRICV	3.820e-23	65.79	Hypothetical protein (Fragment) n=1 Tax=Trieres ch...	[more]
A0A7S2U907_9STRA	9.290e-23	60.87	Hypothetical protein (Fragment) n=1 Tax=Attheya se...	[more]
A0A7R9WKK8_9STRA	4.600e-22	63.64	Hypothetical protein n=1 Tax=Pseudictyota dubia Ta...	[more]
A0A7S4NCM0_9STRA	5.540e-22	63.64	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 97..163 e-value: 6.3E-16 score: 60.0
None	No IPR available	PANTHER	PTHR13976	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED	coord: 23..163
None	No IPR available	PANTHER	PTHR13976:SF22	AT27789P	coord: 23..163
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 85..163

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dudresnayi_contig9990	contig	D-dudresnayi_contig9990:4637..10564 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dudresnayi_contig9990.28797.1	mRNA_D-dudresnayi_contig9990.28797.1	Desmarestia dudresnayi DdudBR16 monoicous	mRNA	D-dudresnayi_contig9990 4637..10565 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-dudresnayi_contig9990.28797.1 ID=prot_D-dudresnayi_contig9990.28797.1|Name=mRNA_D-dudresnayi_contig9990.28797.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=163bp
GGIGVSKGSNGQSLGVSHMAGVQGVGGVNGQVPQQMAPQQGIMGQSMGQG
MGQGMGQGMVGGGVGHGSVQGTMSMGGMQSGMGMGDYPLEDVLGPFPCVR
LRGLPFEATIDDVLRFFQGLVPLDVVMVVRGDGRGAGEAIVVLPNHMEMQ
MALSRDKQHMGRR

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR035979	RBD_domain_sf