mRNA_D-dudresnayi_contig9766.28567.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_D-dudresnayi_contig9766.28567.1
Unique NamemRNA_D-dudresnayi_contig9766.28567.1
TypemRNA
OrganismDesmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Homology
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: D7G257_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G257_ECTSI)

HSP 1 Score: 352 bits (902), Expect = 2.330e-112
Identity = 219/309 (70.87%), Postives = 248/309 (80.26%), Query Frame = 1
Query:    1 CFQLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTDGTAARSFIACVSEVT-DADESCSGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTIEGNTVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVETSRCSVTGNTFGTNRWGFRVTLGSTDNVFERNTLNENSFSDIYAYLGSSDEVAEVSPFTGINVNNKFR 924
            C +LK SST K W RIMG+GGN+DI+ T+++SWD +K+L HI K S DGT  RSFIACVSEV  DADE+C G AQ DMGECRMDIV+S + Y GYD TESYG+TWKVRGLCDD SN +TLFD+VRVYGDM  S+I+ MWYG YSYGHLGGVW++N MHDNHVYGFDPHDDSDYLTI GNT YN          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  VETS C V+ N F  NRWGFR+ LGST NV + N L EN++SDIY+Y G+ +EV EV PFTGIN +N +R
Sbjct:  438 CDELKFSSTKKAWNRIMGHGGNIDIDSTVVRSWDASKTLDHILKDSDDGTTNRSFIACVSEVVVDADETCDGTAQNDMGECRMDIVDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDMKNSDIYGMWYGHYSYGHLGGVWTDNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSNCVVSDNEFTDNRWGFRIILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDNTYR 746          
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: A0A6H5J745_9PHAE (MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J745_9PHAE)

HSP 1 Score: 271 bits (692), Expect = 4.350e-79
Identity = 193/309 (62.46%), Postives = 237/309 (76.70%), Query Frame = 1
Query:    7 QLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTD-GTAARSFIACVSEVTDADESCSGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTIEGNTVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVETSRCSVTGNTFGTNRWGFRVTLGSTDNVFE--RNTLNENSFSDIYAYLGSSDEVAEVSPFTGINVNNKFR 924
            ++ LSS+   +FRI G GG+L   +T + SW E     H+     + G   RS+I C+SE+ +  ++C GVA+K+ GECRMD++ S + YLGY++TESYG++WKVRGLCDD SN +TLF++VRVYGD+  S+I+ +WYG YSYGHLGGVW+NN MHDNHVYGFDPHDDSDYLTI GNT YNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   VETS   VT NT   N++G R+ +GS DN      N+++ N   D+Y Y+GSS +VAEV+P+TGIN  N FR
Sbjct:  529 KILLSSSPTNYFRIRGAGGHLYFYQTEVTSWVEEDLAPHMLPDDAEWGAEPRSYIGCLSEILEEGQTCDGVAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCDDLSNKDTLFESVRVYGDIKNSDIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLVETSHTLVTENTLNDNKYGVRLVVGSNDNTVRVTTNSVSSNRQHDLYLYIGSSSDVAEVAPYTGINERNFFR 837          
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: D7FWW1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW1_ECTSI)

HSP 1 Score: 234 bits (598), Expect = 4.510e-70
Identity = 111/183 (60.66%), Postives = 142/183 (77.60%), Query Frame = 1
Query:    1 CFQLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTDGTAARSFIACVSEVTDADESC-SGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTIEGNTVYN 546
            C +LK+ S+      + G+GGNLDI +TLIQSWDE     HI    + G   RS+IAC SEV + +++C SG A++D GECRMD+V+SELG++GY ++ESYG+TWKVRG C+D SN E +FDNV VYGD++  +IHHMWYGMYSYGH GGVW+++ MHDN+VYGFDPHDDSDYLTI  NTV+N
Sbjct:  153 CDELKIRSSTTLIHAVRGHGGNLDIYKTLIQSWDENLLTAHILADDSTGDEPRSYIACTSEVVNENDTCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPE-VFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHDNYVYGFDPHDDSDYLTIRNNTVWN 334          
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: A0A6H5JNF4_9PHAE (MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF4_9PHAE)

HSP 1 Score: 228 bits (580), Expect = 7.230e-68
Identity = 111/186 (59.68%), Postives = 142/186 (76.34%), Query Frame = 1
Query:    1 CFQLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTDGTAARSFIACVSEVTDADESC-SGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMH---DNHVYGFDPHDDSDYLTIEGNTVYN 546
            C +LK+ S+      + G+GGNLDI +TLIQSWDE     HI    + G   RS+IAC SEV + +++C SG A++D GECRMD+V+SELG++GY ++ESYG+TWKVRG C+D SN E +FDNV VYGD++  +IHHMWYGMYSYGH GGVW+++ MH   DN+VYGFDPHDDSDYLTI  NTV+N
Sbjct:  218 CDELKIRSSPTLIHAVRGHGGNLDIYKTLIQSWDENLLTAHILADDSTGDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPE-VFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHGEDDNYVYGFDPHDDSDYLTIRNNTVWN 402          
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: D7G261_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G261_ECTSI)

HSP 1 Score: 229 bits (584), Expect = 3.400e-66
Identity = 177/304 (58.22%), Postives = 215/304 (70.72%), Query Frame = 1
Query:    7 QLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTD-GTAARSFIACVSEVTDADESCSGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTIEGNTVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVETSRCSVTGNTFGTNRWGFRVTLGSTDNVFERNTLNENSFSDIYAYLGSSDEVAEVSPFTGINVNN 915
            ++ LSS+   +FRI G GG+L   +T + SW E     H      + G   RS+I C+SE+ +  ++C GVA+K+ GECRMD++ S + YLGY++TESYG++WKVRGLC D SN +TLFD+VRVYGD+  S+I+ +WYG YSYGHLGG+W+NN MHDNHVYGFDPHDDSDYLTI GNT YN  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  TS   VT NT   N++G R+ +                          S +VA+V P+TGIN  N
Sbjct:  333 KILLSSSPTNYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEILEEGQTCDGVAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDLQDSDIYGLWYGHYSYGHLGGMWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSHTLVTENTLNDNKYGIRLLVXXXXXXXXXXXXXXXXXXXXXXXXXXSSDVADVEPYTGINERN 636          
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI)

HSP 1 Score: 218 bits (556), Expect = 1.900e-64
Identity = 126/294 (42.86%), Postives = 164/294 (55.78%), Query Frame = 1
Query:    1 CFQLKLSSTV-KRWFRIMGYGGNLDIEETLIQSWD-ETKSLQHIFKASTDGTAARSFIACVSEVTDADESCSGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTIEGNTVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VETSRCSVTGNTFGTNRWGFRVTLGSTDNVFERNTLNENSFSDIYAYLGSSD 870
            C +L++ ST    +F I G+GGNL  E+T++ SWD + +  Q  +K   DG   RSFI CVSEV   +++C   A  +MGECRMDI++SE+GYLGYD++E+YG+TWKVRG C D SN + +FD+V VYGDM GS+IHHM+YGMYS+GH GGVW+NN MHDNH YGFDPHDDSDYL I GN VYN                                                          +ETS C +  N      +G RV LGS++N    N         ++ Y+GS +
Sbjct:   78 CAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYK---DG---RSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPD-VFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDE 361          
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 7.940e-61
Identity = 126/308 (40.91%), Postives = 168/308 (54.55%), Query Frame = 1
Query:    7 QLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTDGTAARSFIACVSE-VTDADESCSGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTIEGNTVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VETSRCSVTGNTFGTNRWGFRVTLGSTDNVFERNTLNENSFSDIYAYLGSSDEVAEVSPFTGINVNNKF 921
            +L+L ST + +  +  +GG+LD   T + SWD + +         D T  RS+I+ VSE VTD DE+C G A+  MGE RMDI NSE+GYLG+  +ESYG+TWKVRG C D+SN E +FD+V VYG+M  S+IHH+ +G+Y+YGH  G W  N+MHDN  YGFDPHDDSD+LTI  N VYN                                                          +E+    V+ NTF  N++G R+++G  DNVF  N ++ NS  + Y YLGS DE   VS  +G + NN F
Sbjct:  134 ELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTN-----SPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPE-IFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGS-DEPDVVS--SGRSQNNVF 432          
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 207 bits (528), Expect = 1.100e-59
Identity = 123/308 (39.94%), Postives = 170/308 (55.19%), Query Frame = 1
Query:    7 QLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTDGTAARSFIACVSEV-TDADESCSGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTIEGNTVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VETSRCSVTGNTFGTNRWGFRVTLGSTDNVFERNTLNENSFSDIYAYLGSSDEVAEVSPFTGINVNNKF 921
            +L+L ST + +  +  +GG+LD   T + SWD + +         D T  RS+I+ +SE+ TD DE+C G A+  MGE RMDI +SE+GYLGY  +ESYG+TWKVRG C+D+SN E +FD+V VYG++  S+IHHM +G+Y+YGH  G W  N+MHDN  YGFDPHDDSD+LTI  N VYN                                                          +E+    V+ NTF  N++G R ++G  DNVF  NT++ N+  + Y+YLG+ DE   VS  +G + NN F
Sbjct:  130 ELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTN-----SPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPE-VFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGT-DEPDVVS--SGRSQNNVF 428          
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI)

HSP 1 Score: 199 bits (507), Expect = 4.930e-58
Identity = 98/177 (55.37%), Postives = 124/177 (70.06%), Query Frame = 1
Query:    1 CFQLKLSST-VKRWFRIMGYGGNLDIEETLIQSWDE-TKSLQHIFKASTDGTAARSFIACVSEVTDADESCSGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTI 525
            C +L++ ST    W+ + G+GG++    T++ SWD   K  Q  ++        RSF+ CVSE     E+C G A+ D GECRMDI+NSE+GY+G+   ESYG+TWKVRG C D SN + +F+   VYGD+  SNIHHM+YGMYSYGH GGVW+NNEMHDNH YGFDPHDDSDYLTI
Sbjct:   44 CDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGG------RSFLNCVSEKLTG-ETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPD-VFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTI 212          
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 3.070e-57
Identity = 142/291 (48.80%), Postives = 186/291 (63.92%), Query Frame = 1
Query:    7 QLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTDGTAARSFIACVSEV-TDADESCSGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTIEGNTVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VETSRCSVTGNTFGTNRWGFRVTLGSTDNVFERNTLNENSFSDIYAYLGSSD 870
            +L+L ST K +  +  +GG+LD   T + +WD +K+     K  TDG+ ARS+I+ VSE+ TD+ E C G A+K MGE RMDI +SE+ YLGY  +ESYG+TWKVRG C D SN E +FD V VYG++  S+IHH  +G+Y+YGH  G W  N+MH N  YGFDPHDDSD+LTI  N V  XXXXXXXXXXXXXXXXXXXXXXXX                      XXXX        +E+    V+ N F  N++G R+++G  DNVF +N ++++S  ++Y Y GS D
Sbjct:  130 ELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKN-----KVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPE-VFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDD 414          
The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G257_ECTSI2.330e-11270.87Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A6H5J745_9PHAE4.350e-7962.46MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CC... [more]
D7FWW1_ECTSI4.510e-7060.66Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5JNF4_9PHAE7.230e-6859.68MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
D7G261_ECTSI3.400e-6658.22Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FRR8_ECTSI1.900e-6442.86Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7FXE4_ECTSI7.940e-6140.91Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI1.100e-5939.94Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
D7FIU4_ECTSI4.930e-5855.37Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAK2_9PHAE3.070e-5748.80Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D-dudresnayi_contig9766contigD-dudresnayi_contig9766:625..5368 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score201.8
Seed ortholog evalue4.5e-49
Seed eggNOG ortholog2880.D8LC73
KEGG koko:K11244
KEGG Pathwayko04011,ko04139,map04011,map04139
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categoryother localisation
Exons8
Model size924
Cds size924
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_D-dudresnayi_contig9766.28567.1prot_D-dudresnayi_contig9766.28567.1Desmarestia dudresnayi DdudBR16 monoicouspolypeptideD-dudresnayi_contig9766 625..5368 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930932.905257-CDS-D-dudresnayi_contig9766:624..7111622930932.905257-CDS-D-dudresnayi_contig9766:624..711Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9766 625..711 +
1690557970.2984965-CDS-D-dudresnayi_contig9766:624..7111690557970.2984965-CDS-D-dudresnayi_contig9766:624..711Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9766 625..711 +
1622930932.9257717-CDS-D-dudresnayi_contig9766:1505..16011622930932.9257717-CDS-D-dudresnayi_contig9766:1505..1601Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9766 1506..1601 +
1690557970.3119717-CDS-D-dudresnayi_contig9766:1505..16011690557970.3119717-CDS-D-dudresnayi_contig9766:1505..1601Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9766 1506..1601 +
1622930932.9474778-CDS-D-dudresnayi_contig9766:2009..21411622930932.9474778-CDS-D-dudresnayi_contig9766:2009..2141Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9766 2010..2141 +
1690557970.320579-CDS-D-dudresnayi_contig9766:2009..21411690557970.320579-CDS-D-dudresnayi_contig9766:2009..2141Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9766 2010..2141 +
1622930932.964973-CDS-D-dudresnayi_contig9766:2831..29881622930932.964973-CDS-D-dudresnayi_contig9766:2831..2988Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9766 2832..2988 +
1690557970.3291132-CDS-D-dudresnayi_contig9766:2831..29881690557970.3291132-CDS-D-dudresnayi_contig9766:2831..2988Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9766 2832..2988 +
1622930932.9876482-CDS-D-dudresnayi_contig9766:3553..36311622930932.9876482-CDS-D-dudresnayi_contig9766:3553..3631Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9766 3554..3631 +
1690557970.3405728-CDS-D-dudresnayi_contig9766:3553..36311690557970.3405728-CDS-D-dudresnayi_contig9766:3553..3631Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9766 3554..3631 +
1622930933.010152-CDS-D-dudresnayi_contig9766:3915..40381622930933.010152-CDS-D-dudresnayi_contig9766:3915..4038Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9766 3916..4038 +
1690557970.3486664-CDS-D-dudresnayi_contig9766:3915..40381690557970.3486664-CDS-D-dudresnayi_contig9766:3915..4038Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9766 3916..4038 +
1622930933.0416822-CDS-D-dudresnayi_contig9766:4272..44031622930933.0416822-CDS-D-dudresnayi_contig9766:4272..4403Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9766 4273..4403 +
1690557970.3599553-CDS-D-dudresnayi_contig9766:4272..44031690557970.3599553-CDS-D-dudresnayi_contig9766:4272..4403Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9766 4273..4403 +
1622930933.064844-CDS-D-dudresnayi_contig9766:5248..53681622930933.064844-CDS-D-dudresnayi_contig9766:5248..5368Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9766 5249..5368 +
1690557970.3680432-CDS-D-dudresnayi_contig9766:5248..53681690557970.3680432-CDS-D-dudresnayi_contig9766:5248..5368Desmarestia dudresnayi DdudBR16 monoicousCDSD-dudresnayi_contig9766 5249..5368 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_D-dudresnayi_contig9766.28567.1

>prot_D-dudresnayi_contig9766.28567.1 ID=prot_D-dudresnayi_contig9766.28567.1|Name=mRNA_D-dudresnayi_contig9766.28567.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=308bp
CFQLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTDGT
AARSFIACVSEVTDADESCSGVAQKDMGECRMDIVNSELGYLGYDSTESY
GVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGV
WSNNEMHDNHVYGFDPHDDSDYLTIEGNTVYNNGNHGIIASKRCDHLLIK
DNVCYDNLGSGIMLHKSCDDSVVRGNECTDNHDAGLSLVETSRCSVTGNT
FGTNRWGFRVTLGSTDNVFERNTLNENSFSDIYAYLGSSDEVAEVSPFTG
INVNNKFR
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mRNA from alignment at D-dudresnayi_contig9766:625..5368+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_D-dudresnayi_contig9766.28567.1 ID=mRNA_D-dudresnayi_contig9766.28567.1|Name=mRNA_D-dudresnayi_contig9766.28567.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=4744bp|location=Sequence derived from alignment at D-dudresnayi_contig9766:625..5368+ (Desmarestia dudresnayi DdudBR16 monoicous)
TGTTTTCAGCTGAAACTGAGCAGCACTGTCAAGAGGTGGTTCAGGATCAT GGGATACGGCGGCAACCTCGACATCGAAGAAACTCTGGTAAGAGGGCGAA AGGGCAACGGCAAATCACGCTTAGTACATATTAGCACTCTTTACGGAGCA GTTTCTTACAAGAATCATTACTCACTATTAGTATGGGGGATCTTTTCGGT TAGGGCTAGCTGTAGAAATTAATATTGAAACATTTTCTGTAACCCGTCTC TATACTATCATATTAAAAGTACGCGAAAAAACAATGTATATCGTGTATCT CTAGGACAGAGGAATCAGTCCAGATTCTGAGTTACGCTACTGGATGTCTG TCGCACGGTAGAAAGTAGAAAGAGAAGGACGACTGTTAACGTGAAGACAA CGAACGTCCTCTGTCACCCCGGCGTGAGATTTTGGACCATATATATATAT ATACATATATATATATATATATTCAGGAAGTGGTGTGCGCGTCTTATCAC TCTGTTTTATTCGTGTTTGTGTCATGTAGCAATAATATACGAGCTATATA GAAATGCCGAATCCTGTTGGCGACAAAAACCGAGACATGTACCGGACCCG GGGGGGGGGGACGGTAGACACCCGTGACCACGGTTTTGCTCGTACCGTAT CCTACGCTGTTGCTGTTGTTGACGATGTTGCGTTGATGTTGGTATTTTCT TTGACAAATGTTTGTTGCTGTTGCTGGGAGTGTTGCTGTTTGTTGCTGCT GCTGTTGTTGTTGCCACATCGGTTGTCTTTGGTGTGGGATTCCTTGAATC ACGTGTGCGAAATTGTGTGGCCACCTTTTTTTGTTTTGTGTTTTTTCCCT TTTGGCTGGGCAATTTTGTTTTATGTTGCAGATCCAGAGCTGGGACGAGA CTAAATCTCTGCAGCACATCTTCAAGGCGAGCACAGACGGCACAGCGGCT CGCTCCTTCATCGCCTGCGTCAGCGAGGTAAATTATTGTCTCAAGTATTG TTGAACATCAATGTGCCACTTTAACAAAAAGAAGAAAAAGAAAAAAACTC CTTGCTCGGTGAAAATCGCATGGAAAAATGGATTTTGTTTTAGTGTGATT TTCCCCCAGGGCGTTTTTTTTTTTATTATTTTTTCAAGTGGTCTATTACG ATAAGCGTGGTTTTGTATGAATGGGTGCGTTCGCTGTCGTCTATCGCGGC ACGTGATCATGCATGTTGTATGCGACGTAAACCAGGTTCGCTTTTTTGTG TTTGTGTATTTATGGTTGCTGTATGGCAGAGGGTTCGTACCGGTATTTTT TTTTGTACTTTTTTACCATGTTTTGCAACGTATTGATCCGTCCCGGTTTT TTGTGCAATTTTTTGTTGTTGCTGGCGTAATAAAGGTGACGGATGCTGAC GAGAGTTGCTCTGGCGTGGCTCAGAAGGACATGGGCGAATGCCGCATGGA TATTGTCAATAGCGAGCTGGGATACCTGGGCTACGACTCCACCGAGTCGT ACGGTGTTACTTGGAAGGTGAACGAACGCCGTTTGCCTTTTTTCATTTTT TTTTTTATATATATCTATATATTTTTTTGTCTTTTTTCTTTTTGTGGCAT GTGTACGCGTGCTTTCTTTTTTTACTCGTGTTTTACTGCTTTTGTTTTAT GCGTGTGCGTGATGTTTTGTTACTACTGTAAGTGAGCGCTGTGTAATTGT CATGCGTGTTTTTTTGTTGTATTTTTATTTTTTGCTACTTTTGTGTGTGT TGCCGTGTTTTATTTATAGTGTGTTTGCGCATAAATCCAATTTTTATTTG TAGAGGATACGACGAAGGTGTGTATTGTCTATCTGCATCATCTATTAGTT AACCCTTTCGTGACTGGTGCTAGTGCCGATGCAGGTGCTGCTAAGATTGT GTACATTTGTGACTAGTAGTCCGCACTTTCGTAACGGTTAGTAGCGCTGC CTCTTATGTCCCCCTGAGGTTCATTTTTTTTTCTTCTCGTTCTCCTGTTG GTTTTGTTTCCGTGTTATCTATACTTTCTAGTATTAGAGCTCTAAATCAC CTGCGTTATATATTTTTTTAAAGTCTGACGCTCAATTTGGTTATTTTTCA GTTTGTGTTGACGGCGAGAGATTCGTCCTCGTGTGCAATGTTTAAAAAAA AAACTTTTTTTTTGCTCGTCGTATGGTATGGTATGATATGATATGATATG ATAACAGGTGCGTGGACTGTGCGATGACCAAAGCAACGCGGAAACTTTGT TCGACAACGTTCGTGTCTACGGCGACATGTCCGGCTCGAACATCCACCAC ATGTGGTACGGTATGTACAGCTACGGGCACCTGGGCGGAGTGTGGTCGAA CAACGAGATGCACGGTGAGCACAAGTGAAGAATTAACTCGTCTTTTGTGT TTCGTCTTTTGTCTTTGTTGTTGTTGGGTTTATGTGTCGTTTGCCCTGTT CGGAGAGGTACGTATGCAGTAATTACATTTGTTTCGATTGGTAATTATTT GCTTTACTTCGGTAAGACATCAAGGGGCTACAGAAAATGCTGGAAATTTA TTTCGATTAGTGTGATAGCCCTAACCTATAACCCTAACTAAGCCCACGTG ACCCCGATATACTAAATACTAATAGTGAATGACGACCTTCCAAGGTATTG CTATCTTATATCTAAAGAGTGCTGATATGTACTGTTCGGATGAGAGGTAT CTTGGTATTGTCTGCTGCGTGCGTGGTCCCGTATCAAGGCGGCCGAGATC TATTAGCTGTGGACGGACCTGTCTTACTTCTTGTTTTTTTTTAGTCCTCC GGCGGATGGGTAATTTGCTTTTTTTTAGTTTCGATCGTTAACGCGTATCA TGGTCTACCCCCTTGTCGTTGTTGTCTTGTCTTGTCTCGTCTTCTTTTTT TTTTTTATTGTCCGTGCGTTGCGCGACAGACAACCATGTATACGGGTTCG ATCCTCATGACGACAGCGACTACCTCACTATCGAGGGAAACACGGTCTAC AACAACGGTGAGTACAGTAGTATCGCAGCTGCAGTCGTTACACCTTTACA CGTTGCTAGACAGCATCTTTAAGGGGGTTTGTACCCCCTGTTAGTGCTAT GGTGCGATAGTGTCATCGCTAAGGGTTAAATGCCGCTTGTACGTCCAATA CTTATCTATCTACCCGCTCGCGGCGACGGCCGCCTTTCAACGCTTTCGTT CTGACTCGATATCGAATCTGTTTTTTTGTTTTTTGTTTTTTTTTTGCTCT TTTTCTGATTTGATGTTTGGGGGGGGGGGGGATGGATTCAGGTAACCACG GGATCATCGCTTCGAAGCGGTGCGACCACCTTTTGATCAAGGACAATGTT TGCTACGACAACCTCGGCAGCGGCATCATGCTTCACAAGAGCTGCGACGA CAGCGTTGTCAGGGGTGAGTGGCGCTTTCGCATTGATATATCGCTGTCTG TTGACTGGACTCGTCTTTTTTTTTTTCCCCTCTTCGTACAAGTGATGCTA CCTTTTGTTATCCTCCGGCGGAAGGGTAAATAAAGCTCTTTTTTTTTTTT TTTCCAATGCATTTTTGTTTGTAGTTCAAACCTGTTTTTGTGTCTTGCGT GTCTCGGCCGTTTTTCTCGTGTCCCGTTTTTGCTTAATTAAAAAACAGGC AACGAGTGTACCGATAACCACGACGCTGGCTTGTCATTGGTTGAGACCTC CCGATGTAGCGTGACCGGCAACACGTTCGGGACGAACCGCTGGGGCTTCC GCGTGACTCTAGGCTCTACGGACAACGTGGTGAGCACTTGCATGATTAGG ATAGAATAGCGTACATGGGATGGGATGGGACGGGATGGACTGTTTTGTTT CGCATGCTTTTTTTTTTTCTCTTTTTCTTTTGTTGAATTTGCGAGTTCGT TTTAAATATGTACCTGGCATATAGCTTGTGACCACGGGATTTGGAATCTC TATGATATAGGATGGAAGAATCAGTATACGCTTTTGAGTAGACAACAGCA ACAACAACGCAGGCAGAGGCCAGTGGTCTAAATTGGTTACGCCTGTTGGT GTCAGAAGTGATGAATCATACACTACCGTCGGAAAAGACGTGTTGAGTCT CGCAGACTGGCGTCCTCGTGTTTCGCATTATCGTGTAGCAATAGCTCCTT CTCGCGGTACGAGGACGGTGGCCGCCGTTGTTGCTGGTTATTATTCCTTA CGAACGGTGTATTACTCTTACCATCTTGTCGAAACATAATGGCTGATGCG TAAATGGTAGCATTACATTGACCAAAGCCTATTCTAAGGAGCTTTTAAGA TTTATTATGTTAGGCCGTAATATGGGGTTGGGCTTCCAGTTGATTGGGTT AGGGTCATATGGACGTAGAGTAAGCGTTGTTCAACCATATTTTACAAAAA AAAAAATTACGAAGATGGTATGGAATGCAAGCCTCCCTTCTAACTCGCTT TTGAGACCCCCCCCCCCTTTGCCTTTTCTCCTACGGCGCTTTATCGGTAC ATGCTTGTTGTATTTTTAATTGTTTCTTTAATTTGTTTTTGAAAAAAAAA CGGATTTTTTTGCTGGGCAAAAAATGTCCCGACTCTTTTGATTCGATTTT TTGTGTGGGCATCCTCGTCGTCAGTTCGAGCGCAACACGCTGAACGAGAA CAGCTTTAGCGACATCTACGCCTACCTGGGGTCCTCGGATGAAGTGGCTG AGGTCTCGCCCTTCACGGGCATCAACGTTAACAACAAATTTAGG
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Coding sequence (CDS) from alignment at D-dudresnayi_contig9766:625..5368+

>mRNA_D-dudresnayi_contig9766.28567.1 ID=mRNA_D-dudresnayi_contig9766.28567.1|Name=mRNA_D-dudresnayi_contig9766.28567.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1848bp|location=Sequence derived from alignment at D-dudresnayi_contig9766:625..5368+ (Desmarestia dudresnayi DdudBR16 monoicous)
TGTTTTCAGCTGAAACTGAGCAGCACTGTCAAGAGGTGGTTCAGGATCAT
GGGATACGGCGGCAACCTCGACATCGAAGAAACTCTGTGTTTTCAGCTGA
AACTGAGCAGCACTGTCAAGAGGTGGTTCAGGATCATGGGATACGGCGGC
AACCTCGACATCGAAGAAACTCTGATCCAGAGCTGGGACGAGACTAAATC
TCTGCAGCACATCTTCAAGGCGAGCACAGACGGCACAGCGGCTCGCTCCT
TCATCGCCTGCGTCAGCGAGATCCAGAGCTGGGACGAGACTAAATCTCTG
CAGCACATCTTCAAGGCGAGCACAGACGGCACAGCGGCTCGCTCCTTCAT
CGCCTGCGTCAGCGAGGTGACGGATGCTGACGAGAGTTGCTCTGGCGTGG
CTCAGAAGGACATGGGCGAATGCCGCATGGATATTGTCAATAGCGAGCTG
GGATACCTGGGCTACGACTCCACCGAGTCGTACGGTGTTACTTGGAAGGT
GACGGATGCTGACGAGAGTTGCTCTGGCGTGGCTCAGAAGGACATGGGCG
AATGCCGCATGGATATTGTCAATAGCGAGCTGGGATACCTGGGCTACGAC
TCCACCGAGTCGTACGGTGTTACTTGGAAGGTGCGTGGACTGTGCGATGA
CCAAAGCAACGCGGAAACTTTGTTCGACAACGTTCGTGTCTACGGCGACA
TGTCCGGCTCGAACATCCACCACATGTGGTACGGTATGTACAGCTACGGG
CACCTGGGCGGAGTGTGGTCGAACAACGAGATGCACGGTGCGTGGACTGT
GCGATGACCAAAGCAACGCGGAAACTTTGTTCGACAACGTTCGTGTCTAC
GGCGACATGTCCGGCTCGAACATCCACCACATGTGGTACGGTATGTACAG
CTACGGGCACCTGGGCGGAGTGTGGTCGAACAACGAGATGCACGACAACC
ATGTATACGGGTTCGATCCTCATGACGACAGCGACTACCTCACTATCGAG
GGAAACACGGTCTACAACAACGACAACCATGTATACGGGTTCGATCCTCA
TGACGACAGCGACTACCTCACTATCGAGGGAAACACGGTCTACAACAACG
GTAACCACGGGATCATCGCTTCGAAGCGGTGCGACCACCTTTTGATCAAG
GACAATGTTTGCTACGACAACCTCGGCAGCGGCATCATGCTTCACAAGAG
CTGCGACGACAGCGTTGTCAGGGGTAACCACGGGATCATCGCTTCGAAGC
GGTGCGACCACCTTTTGATCAAGGACAATGTTTGCTACGACAACCTCGGC
AGCGGCATCATGCTTCACAAGAGCTGCGACGACAGCGTTGTCAGGGGCAA
CGAGTGTACCGATAACCACGACGCTGGCTTGTCATTGGTTGAGACCTCCC
GATGTAGCGTGACCGGCAACACGTTCGGGACGAACCGCTGGGGCTTCCGC
GTGACTCTAGGCTCTACGGACAACGTGGCAACGAGTGTACCGATAACCAC
GACGCTGGCTTGTCATTGGTTGAGACCTCCCGATGTAGCGTGACCGGCAA
CACGTTCGGGACGAACCGCTGGGGCTTCCGCGTGACTCTAGGCTCTACGG
ACAACGTGTTCGAGCGCAACACGCTGAACGAGAACAGCTTTAGCGACATC
TACGCCTACCTGGGGTCCTCGGATGAAGTGGCTGAGGTCTCGCCCTTCAC
GGGCATCAACGTTAACAACAAATTTAGGTTCGAGCGCAACACGCTGAACG
AGAACAGCTTTAGCGACATCTACGCCTACCTGGGGTCCTCGGATGAAGTG
GCTGAGGTCTCGCCCTTCACGGGCATCAACGTTAACAACAAATTTAGG
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