mRNA_D-dudresnayi_contig9766.28567.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: D7G257_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G257_ECTSI) HSP 1 Score: 352 bits (902), Expect = 2.330e-112 Identity = 219/309 (70.87%), Postives = 248/309 (80.26%), Query Frame = 1 Query: 1 CFQLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTDGTAARSFIACVSEVT-DADESCSGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTIEGNTVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVETSRCSVTGNTFGTNRWGFRVTLGSTDNVFERNTLNENSFSDIYAYLGSSDEVAEVSPFTGINVNNKFR 924 C +LK SST K W RIMG+GGN+DI+ T+++SWD +K+L HI K S DGT RSFIACVSEV DADE+C G AQ DMGECRMDIV+S + Y GYD TESYG+TWKVRGLCDD SN +TLFD+VRVYGDM S+I+ MWYG YSYGHLGGVW++N MHDNHVYGFDPHDDSDYLTI GNT YN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VETS C V+ N F NRWGFR+ LGST NV + N L EN++SDIY+Y G+ +EV EV PFTGIN +N +R Sbjct: 438 CDELKFSSTKKAWNRIMGHGGNIDIDSTVVRSWDASKTLDHILKDSDDGTTNRSFIACVSEVVVDADETCDGTAQNDMGECRMDIVDSTVAYFGYDETESYGITWKVRGLCDDLSNKDTLFDSVRVYGDMKNSDIYGMWYGHYSYGHLGGVWTDNLMHDNHVYGFDPHDDSDYLTISGNTCYNNGNHGIIASKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLVETSNCVVSDNEFTDNRWGFRIILGSTGNVLDSNILTENTYSDIYSYYGADEEVPEVEPFTGINTDNTYR 746
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: A0A6H5J745_9PHAE (MEP21 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J745_9PHAE) HSP 1 Score: 271 bits (692), Expect = 4.350e-79 Identity = 193/309 (62.46%), Postives = 237/309 (76.70%), Query Frame = 1 Query: 7 QLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTD-GTAARSFIACVSEVTDADESCSGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTIEGNTVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVETSRCSVTGNTFGTNRWGFRVTLGSTDNVFE--RNTLNENSFSDIYAYLGSSDEVAEVSPFTGINVNNKFR 924 ++ LSS+ +FRI G GG+L +T + SW E H+ + G RS+I C+SE+ + ++C GVA+K+ GECRMD++ S + YLGY++TESYG++WKVRGLCDD SN +TLF++VRVYGD+ S+I+ +WYG YSYGHLGGVW+NN MHDNHVYGFDPHDDSDYLTI GNT YNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VETS VT NT N++G R+ +GS DN N+++ N D+Y Y+GSS +VAEV+P+TGIN N FR Sbjct: 529 KILLSSSPTNYFRIRGAGGHLYFYQTEVTSWVEEDLAPHMLPDDAEWGAEPRSYIGCLSEILEEGQTCDGVAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCDDLSNKDTLFESVRVYGDIKNSDIYGLWYGHYSYGHLGGVWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSLVETSHTLVTENTLNDNKYGVRLVVGSNDNTVRVTTNSVSSNRQHDLYLYIGSSSDVAEVAPYTGINERNFFR 837
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: D7FWW1_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW1_ECTSI) HSP 1 Score: 234 bits (598), Expect = 4.510e-70 Identity = 111/183 (60.66%), Postives = 142/183 (77.60%), Query Frame = 1 Query: 1 CFQLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTDGTAARSFIACVSEVTDADESC-SGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTIEGNTVYN 546 C +LK+ S+ + G+GGNLDI +TLIQSWDE HI + G RS+IAC SEV + +++C SG A++D GECRMD+V+SELG++GY ++ESYG+TWKVRG C+D SN E +FDNV VYGD++ +IHHMWYGMYSYGH GGVW+++ MHDN+VYGFDPHDDSDYLTI NTV+N Sbjct: 153 CDELKIRSSTTLIHAVRGHGGNLDIYKTLIQSWDENLLTAHILADDSTGDEPRSYIACTSEVVNENDTCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPE-VFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHDNYVYGFDPHDDSDYLTIRNNTVWN 334
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: A0A6H5JNF4_9PHAE (MEP16 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF4_9PHAE) HSP 1 Score: 228 bits (580), Expect = 7.230e-68 Identity = 111/186 (59.68%), Postives = 142/186 (76.34%), Query Frame = 1 Query: 1 CFQLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTDGTAARSFIACVSEVTDADESC-SGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMH---DNHVYGFDPHDDSDYLTIEGNTVYN 546 C +LK+ S+ + G+GGNLDI +TLIQSWDE HI + G RS+IAC SEV + +++C SG A++D GECRMD+V+SELG++GY ++ESYG+TWKVRG C+D SN E +FDNV VYGD++ +IHHMWYGMYSYGH GGVW+++ MH DN+VYGFDPHDDSDYLTI NTV+N Sbjct: 218 CDELKIRSSPTLIHAVRGHGGNLDIYKTLIQSWDENLLTAHILADDSTGDEPRSYIACSSEVVNENDTCDSGYAREDKGECRMDMVDSELGHMGYFASESYGITWKVRGFCEDMSNPE-VFDNVNVYGDITNCDIHHMWYGMYSYGHQGGVWTDSLMHGEDDNYVYGFDPHDDSDYLTIRNNTVWN 402
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: D7G261_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G261_ECTSI) HSP 1 Score: 229 bits (584), Expect = 3.400e-66 Identity = 177/304 (58.22%), Postives = 215/304 (70.72%), Query Frame = 1 Query: 7 QLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTD-GTAARSFIACVSEVTDADESCSGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTIEGNTVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVETSRCSVTGNTFGTNRWGFRVTLGSTDNVFERNTLNENSFSDIYAYLGSSDEVAEVSPFTGINVNN 915 ++ LSS+ +FRI G GG+L +T + SW E H + G RS+I C+SE+ + ++C GVA+K+ GECRMD++ S + YLGY++TESYG++WKVRGLC D SN +TLFD+VRVYGD+ S+I+ +WYG YSYGHLGG+W+NN MHDNHVYGFDPHDDSDYLTI GNT YN XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TS VT NT N++G R+ + S +VA+V P+TGIN N Sbjct: 333 KILLSSSPTNYFRIRGAGGHLYFYQTEVTSWVEEDLAPHTLPDDAEWGAEPRSYIGCLSEILEEGQTCDGVAKKERGECRMDVIESIISYLGYEATESYGLSWKVRGLCTDLSNQDTLFDSVRVYGDLQDSDIYGLWYGHYSYGHLGGMWTNNFMHDNHVYGFDPHDDSDYLTITGNTCYNNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSHTLVTENTLNDNKYGIRLLVXXXXXXXXXXXXXXXXXXXXXXXXXXSSDVADVEPYTGINERN 636
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 218 bits (556), Expect = 1.900e-64 Identity = 126/294 (42.86%), Postives = 164/294 (55.78%), Query Frame = 1 Query: 1 CFQLKLSSTV-KRWFRIMGYGGNLDIEETLIQSWD-ETKSLQHIFKASTDGTAARSFIACVSEVTDADESCSGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTIEGNTVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VETSRCSVTGNTFGTNRWGFRVTLGSTDNVFERNTLNENSFSDIYAYLGSSD 870 C +L++ ST +F I G+GGNL E+T++ SWD + + Q +K DG RSFI CVSEV +++C A +MGECRMDI++SE+GYLGYD++E+YG+TWKVRG C D SN + +FD+V VYGDM GS+IHHM+YGMYS+GH GGVW+NN MHDNH YGFDPHDDSDYL I GN VYN +ETS C + N +G RV LGS++N N ++ Y+GS + Sbjct: 78 CAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYK---DG---RSFIRCVSEVLTGEDTC---AINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPD-VFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDE 361
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 211 bits (536), Expect = 7.940e-61 Identity = 126/308 (40.91%), Postives = 168/308 (54.55%), Query Frame = 1 Query: 7 QLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTDGTAARSFIACVSE-VTDADESCSGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTIEGNTVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VETSRCSVTGNTFGTNRWGFRVTLGSTDNVFERNTLNENSFSDIYAYLGSSDEVAEVSPFTGINVNNKF 921 +L+L ST + + + +GG+LD T + SWD + + D T RS+I+ VSE VTD DE+C G A+ MGE RMDI NSE+GYLG+ +ESYG+TWKVRG C D+SN E +FD+V VYG+M S+IHH+ +G+Y+YGH G W N+MHDN YGFDPHDDSD+LTI N VYN +E+ V+ NTF N++G R+++G DNVF N ++ NS + Y YLGS DE VS +G + NN F Sbjct: 134 ELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTN-----SPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPE-IFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGS-DEPDVVS--SGRSQNNVF 432
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI) HSP 1 Score: 207 bits (528), Expect = 1.100e-59 Identity = 123/308 (39.94%), Postives = 170/308 (55.19%), Query Frame = 1 Query: 7 QLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTDGTAARSFIACVSEV-TDADESCSGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTIEGNTVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VETSRCSVTGNTFGTNRWGFRVTLGSTDNVFERNTLNENSFSDIYAYLGSSDEVAEVSPFTGINVNNKF 921 +L+L ST + + + +GG+LD T + SWD + + D T RS+I+ +SE+ TD DE+C G A+ MGE RMDI +SE+GYLGY +ESYG+TWKVRG C+D+SN E +FD+V VYG++ S+IHHM +G+Y+YGH G W N+MHDN YGFDPHDDSD+LTI N VYN +E+ V+ NTF N++G R ++G DNVF NT++ N+ + Y+YLG+ DE VS +G + NN F Sbjct: 130 ELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTN-----SPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPE-VFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGT-DEPDVVS--SGRSQNNVF 428
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 199 bits (507), Expect = 4.930e-58 Identity = 98/177 (55.37%), Postives = 124/177 (70.06%), Query Frame = 1 Query: 1 CFQLKLSST-VKRWFRIMGYGGNLDIEETLIQSWDE-TKSLQHIFKASTDGTAARSFIACVSEVTDADESCSGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTI 525 C +L++ ST W+ + G+GG++ T++ SWD K Q ++ RSF+ CVSE E+C G A+ D GECRMDI+NSE+GY+G+ ESYG+TWKVRG C D SN + +F+ VYGD+ SNIHHM+YGMYSYGH GGVW+NNEMHDNH YGFDPHDDSDYLTI Sbjct: 44 CDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGG------RSFLNCVSEKLTG-ETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPD-VFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTI 212
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE) HSP 1 Score: 201 bits (511), Expect = 3.070e-57 Identity = 142/291 (48.80%), Postives = 186/291 (63.92%), Query Frame = 1 Query: 7 QLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTDGTAARSFIACVSEV-TDADESCSGVAQKDMGECRMDIVNSELGYLGYDSTESYGVTWKVRGLCDDQSNAETLFDNVRVYGDMSGSNIHHMWYGMYSYGHLGGVWSNNEMHDNHVYGFDPHDDSDYLTIEGNTVYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VETSRCSVTGNTFGTNRWGFRVTLGSTDNVFERNTLNENSFSDIYAYLGSSD 870 +L+L ST K + + +GG+LD T + +WD +K+ K TDG+ ARS+I+ VSE+ TD+ E C G A+K MGE RMDI +SE+ YLGY +ESYG+TWKVRG C D SN E +FD V VYG++ S+IHH +G+Y+YGH G W N+MH N YGFDPHDDSD+LTI N V XXXXXXXXXXXXXXXXXXXXXXXX XXXX +E+ V+ N F N++G R+++G DNVF +N ++++S ++Y Y GS D Sbjct: 130 ELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKN-----KVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPE-VFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDD 414 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9766.28567.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9766.28567.1 >prot_D-dudresnayi_contig9766.28567.1 ID=prot_D-dudresnayi_contig9766.28567.1|Name=mRNA_D-dudresnayi_contig9766.28567.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=308bp CFQLKLSSTVKRWFRIMGYGGNLDIEETLIQSWDETKSLQHIFKASTDGTback to top mRNA from alignment at D-dudresnayi_contig9766:625..5368+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9766.28567.1 ID=mRNA_D-dudresnayi_contig9766.28567.1|Name=mRNA_D-dudresnayi_contig9766.28567.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=4744bp|location=Sequence derived from alignment at D-dudresnayi_contig9766:625..5368+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9766:625..5368+ >mRNA_D-dudresnayi_contig9766.28567.1 ID=mRNA_D-dudresnayi_contig9766.28567.1|Name=mRNA_D-dudresnayi_contig9766.28567.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1848bp|location=Sequence derived from alignment at D-dudresnayi_contig9766:625..5368+ (Desmarestia dudresnayi DdudBR16 monoicous)back to top |