mRNA_D-dudresnayi_contig975.28543.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig975.28543.1 vs. uniprot
Match: A0A6H5KKD9_9PHAE (ABC protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KKD9_9PHAE) HSP 1 Score: 157 bits (397), Expect = 2.720e-42 Identity = 83/103 (80.58%), Postives = 93/103 (90.29%), Query Frame = 1 Query: 31 RTSPPMPTQLSALLRRSALNVTRDPYLACLHIVLTLCVGLVVGSLFKDLKRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMALFLHERASGAYGAA 339 R PP+ TQLSALL+R+++NV RDPYLA LHIVLT+ VG+V GSLF+DL RLNG TAGVQDRLGVVFLLLL+LSLLCLTSLAAWRKQM LF+HERASGAYGAA Sbjct: 1784 RPPPPVCTQLSALLQRASINVARDPYLAGLHIVLTVFVGVVFGSLFRDLGRLNGCTAGVQDRLGVVFLLLLFLSLLCLTSLAAWRKQMTLFVHERASGAYGAA 1886
BLAST of mRNA_D-dudresnayi_contig975.28543.1 vs. uniprot
Match: A0A6H5L0D0_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0D0_9PHAE) HSP 1 Score: 127 bits (318), Expect = 3.130e-33 Identity = 68/104 (65.38%), Postives = 81/104 (77.88%), Query Frame = 1 Query: 25 LVRTSPPMPTQLSALLRRSALNVTRDPYLACLHIVLTLCVGLVVGSLFKDLKRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMALFLHERASGAYGA 336 L+ +PP+ TQL AL+ R+ +V RDPYLA LH+VLT VGL+VGSLF DL+ N TAG+Q RLGVVF LLL LS LCLTSLA+W +QM+LF HER SGAYGA Sbjct: 48 LLAWTPPVTTQLRALMGRAVRDVARDPYLATLHLVLTPLVGLLVGSLFGDLRHDNDQTAGIQGRLGVVFFLLLLLSFLCLTSLASWVRQMSLFRHERESGAYGA 151
BLAST of mRNA_D-dudresnayi_contig975.28543.1 vs. uniprot
Match: D8LNV5_ECTSI (ATP-binding cassette superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNV5_ECTSI) HSP 1 Score: 129 bits (325), Expect = 1.380e-32 Identity = 69/105 (65.71%), Postives = 83/105 (79.05%), Query Frame = 1 Query: 25 LVRTSPPMPTQLSALLRRSALNVTRDPYLACLHIVLTLCVGLVVGSLFKDLKRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMALFLHERASGAYGAA 339 L+ +PP+ TQL AL+ R+ +V RDPYLA LH+VLT VGL+VGSLF DL+R N TAG+Q RLGV+F LLL LS LCLTSLA+W +QM+LF HER SGAYGAA Sbjct: 1707 LLAWAPPVTTQLRALMGRAVRDVARDPYLATLHLVLTPLVGLLVGSLFGDLRRDNDQTAGIQGRLGVIFFLLLLLSFLCLTSLASWVRQMSLFRHERESGAYGAA 1811
BLAST of mRNA_D-dudresnayi_contig975.28543.1 vs. uniprot
Match: C1MIB0_MICPC (ATP-binding cassette superfamily n=3 Tax=Micromonas pusilla TaxID=38833 RepID=C1MIB0_MICPC) HSP 1 Score: 81.6 bits (200), Expect = 1.020e-15 Identity = 46/95 (48.42%), Postives = 60/95 (63.16%), Query Frame = 1 Query: 49 PTQLSALLRRSALNVTRDPYLACLHIVLTLCVGLVVGSLFKDLKRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMALFLHERASGAYG 333 P Q+ ALLRR NV R P+L LH V T L +G +F + T G+Q+R+G +F +LLYL+L+ L+SL WR+ LFL ERASGAYG Sbjct: 1675 PRQVRALLRRMVRNVRRHPFLILLHFVATGVASLGLGGVFFAAGK---DTGGIQNRMGCLFFILLYLALMSLSSLPVWREDRLLFLRERASGAYG 1766
BLAST of mRNA_D-dudresnayi_contig975.28543.1 vs. uniprot
Match: A0A835W233_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835W233_9CHLO) HSP 1 Score: 80.9 bits (198), Expect = 1.900e-15 Identity = 48/100 (48.00%), Postives = 64/100 (64.00%), Query Frame = 1 Query: 37 SPPMPTQLSALLRRSALNVTRDPYLACLHIVLTLCVGLVVGSLFKDLKRLNGS-TAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMALFLHERASGAYG 333 SPP QL AL R N R P+ L+ TL V + +G +FK+ +G+ TAG+Q+RLGV+F +LLYLSL+ L+SL WR + LF+ ERASG YG Sbjct: 855 SPPYLLQLRALSVRLLRNTYRHPFSVALNFAATLAVAVCLGLIFKN----SGTETAGIQNRLGVLFFMLLYLSLMALSSLPIWRDEKLLFMRERASGVYG 950
BLAST of mRNA_D-dudresnayi_contig975.28543.1 vs. uniprot
Match: A0A7R9Y6A1_MICPS (Hypothetical protein (Fragment) n=2 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9Y6A1_MICPS) HSP 1 Score: 79.3 bits (194), Expect = 6.250e-15 Identity = 44/95 (46.32%), Postives = 60/95 (63.16%), Query Frame = 1 Query: 49 PTQLSALLRRSALNVTRDPYLACLHIVLTLCVGLVVGSLFKDLKRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMALFLHERASGAYG 333 P Q+ ALLRR NV R P+L LH V T L +G +F + T G+Q+R+G +F +LLYL+L+ L+SL WR+ LFL ER++GAYG Sbjct: 323 PRQVRALLRRMVRNVRRHPFLILLHFVATGVASLGLGGVFFAAGK---DTGGIQNRMGCLFFILLYLALMSLSSLPVWREDRLLFLRERSNGAYG 414
BLAST of mRNA_D-dudresnayi_contig975.28543.1 vs. uniprot
Match: A0A250XNY5_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XNY5_9CHLO) HSP 1 Score: 79.0 bits (193), Expect = 8.960e-15 Identity = 47/98 (47.96%), Postives = 61/98 (62.24%), Query Frame = 1 Query: 37 SPPMPTQLSALLRRSALNVTRDPYLACLHIVLTLCVGLVVGSLFKDLKRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMALFLHERASGAY 330 SPP QLSAL R N TR P L L+ TL + +V+ +F + +T G+Q+RLGV+F LLLYLSL+ L+SL WR + LFL ERA+G Y Sbjct: 897 SPPWKDQLSALSARLLRNTTRHPLLIALNFTSTLVLAVVLAVVFYNAGT---NTGGIQNRLGVLFFLLLYLSLMALSSLPIWRDERLLFLRERAAGLY 991
BLAST of mRNA_D-dudresnayi_contig975.28543.1 vs. uniprot
Match: A0A2K3CSF0_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3CSF0_CHLRE) HSP 1 Score: 78.2 bits (191), Expect = 1.670e-14 Identity = 46/100 (46.00%), Postives = 64/100 (64.00%), Query Frame = 1 Query: 37 SPPMPTQLSALLRRSALNVTRDPYLACLHIVLTLCVGLVVGSLFKDLKRLNGS-TAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMALFLHERASGAYG 333 SPP QL AL R N R P+ L+ TL V + +G +F++ +G+ T+G+Q+RLGV+F +LLYLSL+ L+SL WR + LF+ ERASG YG Sbjct: 640 SPPYLLQLRALSVRLLRNTYRHPFSVALNFAATLAVAVCLGLIFRN----SGTETSGIQNRLGVLFFMLLYLSLMSLSSLPIWRDEKLLFMRERASGVYG 735
BLAST of mRNA_D-dudresnayi_contig975.28543.1 vs. uniprot
Match: A0A7S0S945_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0S945_9CHLO) HSP 1 Score: 77.0 bits (188), Expect = 2.260e-14 Identity = 43/93 (46.24%), Postives = 58/93 (62.37%), Query Frame = 1 Query: 55 QLSALLRRSALNVTRDPYLACLHIVLTLCVGLVVGSLFKDLKRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMALFLHERASGAYG 333 Q+ L +R A V R P+L LH V T L +G++F R T G+Q+R+G +F +LLYL+L+ L+SL WR+ LFL ERASGAYG Sbjct: 21 QVRTLWQRMARTVRRHPFLITLHFVATGFAALSIGAIFFQAGR---DTGGIQNRMGCLFFMLLYLTLMSLSSLPVWREDRLLFLRERASGAYG 110
BLAST of mRNA_D-dudresnayi_contig975.28543.1 vs. uniprot
Match: A0A7S2WSI0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WSI0_9STRA) HSP 1 Score: 77.0 bits (188), Expect = 4.200e-14 Identity = 42/96 (43.75%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 52 TQLSALLRRSALNVTRDPYLACLHIVLTLCVGLVVGSLFKDLKRLNGSTAGVQDRLGVVFLLLLYLSLLCLTSLAAWRKQMALFLHERASGAYGAA 339 TQ L +R + R+ + L+ ++ + V+GS+FKD+ R + TAG+QDR G++F L+LYLSLL L+SL WR + ALF+ ER SG Y A Sbjct: 1217 TQFFVLSQRCMRGLLRNWFQLILNGLMAVVTAAVLGSVFKDVYRKDDETAGIQDRFGIMFFLVLYLSLLSLSSLPIWRDEQALFVVERGSGIYSTA 1312 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig975.28543.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig975.28543.1 >prot_D-dudresnayi_contig975.28543.1 ID=prot_D-dudresnayi_contig975.28543.1|Name=mRNA_D-dudresnayi_contig975.28543.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=113bp PLDADAKALVRTSPPMPTQLSALLRRSALNVTRDPYLACLHIVLTLCVGLback to top mRNA from alignment at D-dudresnayi_contig975:29681..30924- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig975.28543.1 ID=mRNA_D-dudresnayi_contig975.28543.1|Name=mRNA_D-dudresnayi_contig975.28543.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1244bp|location=Sequence derived from alignment at D-dudresnayi_contig975:29681..30924- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig975:29681..30924- >mRNA_D-dudresnayi_contig975.28543.1 ID=mRNA_D-dudresnayi_contig975.28543.1|Name=mRNA_D-dudresnayi_contig975.28543.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=678bp|location=Sequence derived from alignment at D-dudresnayi_contig975:29681..30924- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |