mRNA_D-dudresnayi_contig9666.28452.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: D7FQE5_ECTSI (AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQE5_ECTSI) HSP 1 Score: 308 bits (788), Expect = 6.740e-102 Identity = 158/172 (91.86%), Postives = 162/172 (94.19%), Query Frame = 1 Query: 1 YTVQVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNKVGLPPAGGINAHGRPRSGHSGGGGGVGSSGLPGMRTR 516 Y VGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVD+QESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQIL AINDQNRLHAASNKVGLPP+GGI+AHGRP SGG GG GSSG+PGMRTR Sbjct: 20 YQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILLAINDQNRLHAASNKVGLPPSGGISAHGRP----SGGVGGGGSSGIPGMRTR 187
BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: A0A835ZDS3_9STRA (AP complex subunit sigma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDS3_9STRA) HSP 1 Score: 240 bits (613), Expect = 1.540e-75 Identity = 115/138 (83.33%), Postives = 129/138 (93.48%), Query Frame = 1 Query: 1 YTVQVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNKVGL 414 Y E+AQ+SVI+RIFQQVAQRPD+FCNYLEG IPEWGEGTKLIYRHYATLYF+FAVD+QESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHYVLDE+IMGGMVLETNIN +L+A+NDQ++LHAAS KV L Sbjct: 20 YKTVTDEDAQQSVIRRIFQQVAQRPDNFCNYLEGSIPEWGEGTKLIYRHYATLYFIFAVDSQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYVLDEMIMGGMVLETNINAVLSAVNDQSKLHAASMKVQL 157
BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: W7T2Y9_9STRA (AP complex subunit sigma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2Y9_9STRA) HSP 1 Score: 236 bits (601), Expect = 9.590e-74 Identity = 115/136 (84.56%), Postives = 122/136 (89.71%), Query Frame = 1 Query: 1 YTVQVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNKV 408 Y +GEEAQ+SVI+++FQQVAQRPDSFCNYL+G IPEWGEG KLIYRHYATLYFVFAVD QESDLGILDL+QVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIM GMVLETNI IL INDQNRLHA S K Sbjct: 20 YQSVIGEEAQQSVIRKVFQQVAQRPDSFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLHAQSQKT 155
BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: A0A7R9U773_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U773_9STRA) HSP 1 Score: 228 bits (581), Expect = 1.630e-70 Identity = 113/142 (79.58%), Postives = 123/142 (86.62%), Query Frame = 1 Query: 25 AQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNKVGLPPAGGINAHGRP 450 AQ+SVI+R+FQQV QRPDSFCNYLEG +PEWG+ KLIYRHYATLYFVFAVD+QESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHYVLDEIIM GMVLETNI IL AINDQ+R+H ASNK P G GRP Sbjct: 41 AQQSVIRRVFQQVGQRPDSFCNYLEGSVPEWGDDVKLIYRHYATLYFVFAVDSQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYVLDEIIMAGMVLETNIVNILQAINDQHRMHMASNKA-QPGTGNAVGRGRP 181
BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: A0A6S8ZKR8_9STRA (AP complex subunit sigma n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZKR8_9STRA) HSP 1 Score: 227 bits (579), Expect = 1.920e-70 Identity = 108/133 (81.20%), Postives = 119/133 (89.47%), Query Frame = 1 Query: 1 YTVQVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAAS 399 Y EE Q+SVI+R+FQQVAQRPDSFCNYLEGIIPEWG KLIYRHYATLYFVFAVD+QESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHYVLDEI+MGGMVLETNIN +L AI DQ ++H +S Sbjct: 20 YQSVTSEETQQSVIRRVFQQVAQRPDSFCNYLEGIIPEWGSNIKLIYRHYATLYFVFAVDSQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYVLDEIVMGGMVLETNINSVLQAIGDQTKMHKSS 152
BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: A0A7S1B3Z2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B3Z2_9STRA) HSP 1 Score: 229 bits (583), Expect = 2.730e-70 Identity = 110/126 (87.30%), Postives = 121/126 (96.03%), Query Frame = 1 Query: 22 EAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAAS 399 EAQ++VI+RIFQQVA+RPDSFCNYLEG +PEWGEG KLIYRHYATLYFVFAVDAQESDLGILDL+QVFVEALDKCFENVCELDLIFHSDKVH+VLDEI+MGGMVLETNI ILTAI++QN+LH AS Sbjct: 76 EAQQAVIRRIFQQVARRPDSFCNYLEGSVPEWGEGVKLIYRHYATLYFVFAVDAQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHHVLDEIVMGGMVLETNIMSILTAISEQNKLHNAS 201
BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: A0A7S2P852_9STRA (AP complex subunit sigma n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P852_9STRA) HSP 1 Score: 223 bits (569), Expect = 6.170e-69 Identity = 108/144 (75.00%), Postives = 121/144 (84.03%), Query Frame = 1 Query: 1 YTVQVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNKVGLPPAGGI 432 Y EE Q+ VI+R+F+Q++ RPD+FCNYLEGI+PEWG KLIYRHYATLYFVFAVDAQESDLGILDL+QVFVEALDKCFENVCELDLIFHSDKVHYVLDEI+MGGMVLETNI IL AI DQ +LHAAS K + G+ Sbjct: 20 YQSVTSEEIQQRVIRRVFEQISSRPDNFCNYLEGIVPEWGSNIKLIYRHYATLYFVFAVDAQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIVMGGMVLETNIASILQAIQDQGKLHAASLKAKVDKTDGL 163
BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: A0A482RW46_9ARCH (Clat_adaptor_s domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RW46_9ARCH) HSP 1 Score: 223 bits (569), Expect = 2.010e-68 Identity = 109/145 (75.17%), Postives = 122/145 (84.14%), Query Frame = 1 Query: 1 YTVQVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAAS-----NKVGLPP 420 Y QVGEEAQ+ VI+R+FQQ+ +RPDSFCNYL G +PEWGE TK+IYRHYATLYFVFAVD QESDLGILDL+QV VEALDKCFENVCELDLIFHSDKV+Y+LDEIIM GMVLETNI+ IL A+ DQ +LHAAS LPP Sbjct: 53 YLSQVGEEAQQRVIRRVFQQIVKRPDSFCNYLAGSVPEWGEDTKIIYRHYATLYFVFAVDGQESDLGILDLIQVIVEALDKCFENVCELDLIFHSDKVNYILDEIIMAGMVLETNIHAILAAVQDQAKLHAASLNSYDGSASLPP 197
BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: B5YNE9_THAPS (AP complex subunit sigma n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNE9_THAPS) HSP 1 Score: 222 bits (565), Expect = 2.310e-68 Identity = 106/130 (81.54%), Postives = 118/130 (90.77%), Query Frame = 1 Query: 16 GEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNK 405 GE+ Q+SVI+R+FQQV+ RPDSFCNYLEG +PEWGE KLIYRHYATLYFVFAVD+QESDLGILDL+QVFVEALDK FENVCELDLIFHSD+VHY+LDEI+MGGMVLETNIN IL AINDQ R+H S K Sbjct: 25 GEQRQQSVIRRVFQQVSTRPDSFCNYLEGSVPEWGENIKLIYRHYATLYFVFAVDSQESDLGILDLIQVFVEALDKRFENVCELDLIFHSDRVHYILDEIVMGGMVLETNINSILQAINDQERMHNESMK 154
BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: A0A7S3JNG6_9STRA (AP complex subunit sigma n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JNG6_9STRA) HSP 1 Score: 221 bits (564), Expect = 3.490e-68 Identity = 113/151 (74.83%), Postives = 123/151 (81.46%), Query Frame = 1 Query: 10 QVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNKVGLPPAGGINAHGRPRSGH 462 Q EE Q+ VI++IFQQV+QRPDSFCNYLEG IPEWGE TKLIYRHYATLYFVFAVD ESDLGILDL+QVFVEALDKCFENVCELDLIFHSDKVHY+LDEI+M GMVLETNI IL +NDQN+LH S L A G+N G P H Sbjct: 28 QSAEEVQQQVIRKIFQQVSQRPDSFCNYLEGSIPEWGETTKLIYRHYATLYFVFAVDKLESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYILDEIVMAGMVLETNIVSILQCVNDQNKLHQKSLSK-LNEALGVNKKGGPGRPH 177 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig9666.28452.1 >prot_D-dudresnayi_contig9666.28452.1 ID=prot_D-dudresnayi_contig9666.28452.1|Name=mRNA_D-dudresnayi_contig9666.28452.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=173bp YTVQVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYback to top mRNA from alignment at D-dudresnayi_contig9666:9028..11193- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig9666.28452.1 ID=mRNA_D-dudresnayi_contig9666.28452.1|Name=mRNA_D-dudresnayi_contig9666.28452.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2166bp|location=Sequence derived from alignment at D-dudresnayi_contig9666:9028..11193- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig9666:9028..11193- >mRNA_D-dudresnayi_contig9666.28452.1 ID=mRNA_D-dudresnayi_contig9666.28452.1|Name=mRNA_D-dudresnayi_contig9666.28452.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1038bp|location=Sequence derived from alignment at D-dudresnayi_contig9666:9028..11193- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |