prot_D-dudresnayi_contig9666.28452.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-dudresnayi_contig9666.28452.1
Unique Name	prot_D-dudresnayi_contig9666.28452.1
Type	polypeptide
Organism	Desmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length	173

Homology

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BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: D7FQE5_ECTSI (AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQE5_ECTSI)

HSP 1 Score: 308 bits (788), Expect = 3.490e-105
Identity = 158/172 (91.86%), Postives = 162/172 (94.19%), Query Frame = 0

Query:    1 YTVQVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNKVGLPPAGGINAHGRPRSGHSGGGGGVGSSGLPGMRTR 172
            Y   VGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVD+QESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQIL AINDQNRLHAASNKVGLPP+GGI+AHGRP    SGG GG GSSG+PGMRTR
Sbjct:   20 YQTVVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDSQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILLAINDQNRLHAASNKVGLPPSGGISAHGRP----SGGVGGGGSSGIPGMRTR 187

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BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: A0A835ZDS3_9STRA (AP complex subunit sigma n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDS3_9STRA)

HSP 1 Score: 240 bits (613), Expect = 1.210e-78
Identity = 115/138 (83.33%), Postives = 129/138 (93.48%), Query Frame = 0

Query:    1 YTVQVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNKVGL 138
            Y     E+AQ+SVI+RIFQQVAQRPD+FCNYLEG IPEWGEGTKLIYRHYATLYF+FAVD+QESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHYVLDE+IMGGMVLETNIN +L+A+NDQ++LHAAS KV L
Sbjct:   20 YKTVTDEDAQQSVIRRIFQQVAQRPDNFCNYLEGSIPEWGEGTKLIYRHYATLYFIFAVDSQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYVLDEMIMGGMVLETNINAVLSAVNDQSKLHAASMKVQL 157

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BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: W7T2Y9_9STRA (AP complex subunit sigma n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2Y9_9STRA)

HSP 1 Score: 236 bits (601), Expect = 7.820e-77
Identity = 115/136 (84.56%), Postives = 122/136 (89.71%), Query Frame = 0

Query:    1 YTVQVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNKV 136
            Y   +GEEAQ+SVI+++FQQVAQRPDSFCNYL+G IPEWGEG KLIYRHYATLYFVFAVD QESDLGILDL+QVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIM GMVLETNI  IL  INDQNRLHA S K 
Sbjct:   20 YQSVIGEEAQQSVIRKVFQQVAQRPDSFCNYLDGSIPEWGEGVKLIYRHYATLYFVFAVDQQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMAGMVLETNIIHILQVINDQNRLHAQSQKT 155

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BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: A0A7R9U773_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U773_9STRA)

HSP 1 Score: 228 bits (581), Expect = 1.420e-73
Identity = 113/142 (79.58%), Postives = 123/142 (86.62%), Query Frame = 0

Query:    9 AQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNKVGLPPAGGINAHGRP 150
            AQ+SVI+R+FQQV QRPDSFCNYLEG +PEWG+  KLIYRHYATLYFVFAVD+QESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHYVLDEIIM GMVLETNI  IL AINDQ+R+H ASNK   P  G     GRP
Sbjct:   41 AQQSVIRRVFQQVGQRPDSFCNYLEGSVPEWGDDVKLIYRHYATLYFVFAVDSQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYVLDEIIMAGMVLETNIVNILQAINDQHRMHMASNKA-QPGTGNAVGRGRP 181

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BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: A0A6S8ZKR8_9STRA (AP complex subunit sigma n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8ZKR8_9STRA)

HSP 1 Score: 227 bits (579), Expect = 1.680e-73
Identity = 108/133 (81.20%), Postives = 119/133 (89.47%), Query Frame = 0

Query:    1 YTVQVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAAS 133
            Y     EE Q+SVI+R+FQQVAQRPDSFCNYLEGIIPEWG   KLIYRHYATLYFVFAVD+QESDLGILDL+QVFVEALDKCFENVCELDLIFHSD+VHYVLDEI+MGGMVLETNIN +L AI DQ ++H +S
Sbjct:   20 YQSVTSEETQQSVIRRVFQQVAQRPDSFCNYLEGIIPEWGSNIKLIYRHYATLYFVFAVDSQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDRVHYVLDEIVMGGMVLETNINSVLQAIGDQTKMHKSS 152

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BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: A0A7S1B3Z2_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B3Z2_9STRA)

HSP 1 Score: 229 bits (583), Expect = 2.360e-73
Identity = 110/126 (87.30%), Postives = 121/126 (96.03%), Query Frame = 0

Query:    8 EAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAAS 133
            EAQ++VI+RIFQQVA+RPDSFCNYLEG +PEWGEG KLIYRHYATLYFVFAVDAQESDLGILDL+QVFVEALDKCFENVCELDLIFHSDKVH+VLDEI+MGGMVLETNI  ILTAI++QN+LH AS
Sbjct:   76 EAQQAVIRRIFQQVARRPDSFCNYLEGSVPEWGEGVKLIYRHYATLYFVFAVDAQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHHVLDEIVMGGMVLETNIMSILTAISEQNKLHNAS 201

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BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: A0A7S2P852_9STRA (AP complex subunit sigma n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2P852_9STRA)

HSP 1 Score: 223 bits (569), Expect = 5.600e-72
Identity = 108/144 (75.00%), Postives = 121/144 (84.03%), Query Frame = 0

Query:    1 YTVQVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNKVGLPPAGGI 144
            Y     EE Q+ VI+R+F+Q++ RPD+FCNYLEGI+PEWG   KLIYRHYATLYFVFAVDAQESDLGILDL+QVFVEALDKCFENVCELDLIFHSDKVHYVLDEI+MGGMVLETNI  IL AI DQ +LHAAS K  +    G+
Sbjct:   20 YQSVTSEEIQQRVIRRVFEQISSRPDNFCNYLEGIVPEWGSNIKLIYRHYATLYFVFAVDAQESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIVMGGMVLETNIASILQAIQDQGKLHAASLKAKVDKTDGL 163

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BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: A0A482RW46_9ARCH (Clat_adaptor_s domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RW46_9ARCH)

HSP 1 Score: 223 bits (569), Expect = 1.820e-71
Identity = 109/145 (75.17%), Postives = 122/145 (84.14%), Query Frame = 0

Query:    1 YTVQVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAAS-----NKVGLPP 140
            Y  QVGEEAQ+ VI+R+FQQ+ +RPDSFCNYL G +PEWGE TK+IYRHYATLYFVFAVD QESDLGILDL+QV VEALDKCFENVCELDLIFHSDKV+Y+LDEIIM GMVLETNI+ IL A+ DQ +LHAAS         LPP
Sbjct:   53 YLSQVGEEAQQRVIRRVFQQIVKRPDSFCNYLAGSVPEWGEDTKIIYRHYATLYFVFAVDGQESDLGILDLIQVIVEALDKCFENVCELDLIFHSDKVNYILDEIIMAGMVLETNIHAILAAVQDQAKLHAASLNSYDGSASLPP 197

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BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: B5YNE9_THAPS (AP complex subunit sigma n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YNE9_THAPS)

HSP 1 Score: 222 bits (565), Expect = 2.130e-71
Identity = 106/130 (81.54%), Postives = 118/130 (90.77%), Query Frame = 0

Query:    6 GEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNK 135
            GE+ Q+SVI+R+FQQV+ RPDSFCNYLEG +PEWGE  KLIYRHYATLYFVFAVD+QESDLGILDL+QVFVEALDK FENVCELDLIFHSD+VHY+LDEI+MGGMVLETNIN IL AINDQ R+H  S K
Sbjct:   25 GEQRQQSVIRRVFQQVSTRPDSFCNYLEGSVPEWGENIKLIYRHYATLYFVFAVDSQESDLGILDLIQVFVEALDKRFENVCELDLIFHSDRVHYILDEIVMGGMVLETNINSILQAINDQERMHNESMK 154

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BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Match: A0A7S3JNG6_9STRA (AP complex subunit sigma n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JNG6_9STRA)

HSP 1 Score: 221 bits (564), Expect = 3.220e-71
Identity = 113/151 (74.83%), Postives = 123/151 (81.46%), Query Frame = 0

Query:    4 QVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHYATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHYVLDEIIMGGMVLETNINQILTAINDQNRLHAASNKVGLPPAGGINAHGRPRSGH 154
            Q  EE Q+ VI++IFQQV+QRPDSFCNYLEG IPEWGE TKLIYRHYATLYFVFAVD  ESDLGILDL+QVFVEALDKCFENVCELDLIFHSDKVHY+LDEI+M GMVLETNI  IL  +NDQN+LH  S    L  A G+N  G P   H
Sbjct:   28 QSAEEVQQQVIRKIFQQVSQRPDSFCNYLEGSIPEWGETTKLIYRHYATLYFVFAVDKLESDLGILDLIQVFVEALDKCFENVCELDLIFHSDKVHYILDEIVMAGMVLETNIVSILQCVNDQNKLHQKSLSK-LNEALGVNKKGGPGRPH 177

The following BLAST results are available for this feature:

BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot

BLAST of mRNA_D-dudresnayi_contig9666.28452.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FQE5_ECTSI	3.490e-105	91.86	AP complex subunit sigma n=2 Tax=Ectocarpus TaxID=...	[more]
A0A835ZDS3_9STRA	1.210e-78	83.33	AP complex subunit sigma n=1 Tax=Tribonema minus T...	[more]
W7T2Y9_9STRA	7.820e-77	84.56	AP complex subunit sigma n=2 Tax=Monodopsidaceae T...	[more]
A0A7R9U773_9STRA	1.420e-73	79.58	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]
A0A6S8ZKR8_9STRA	1.680e-73	81.20	AP complex subunit sigma n=1 Tax=Ditylum brightwel...	[more]
A0A7S1B3Z2_9STRA	2.360e-73	87.30	Hypothetical protein n=1 Tax=Corethron hystrix Tax...	[more]
A0A7S2P852_9STRA	5.600e-72	75.00	AP complex subunit sigma n=1 Tax=Leptocylindrus da...	[more]
A0A482RW46_9ARCH	1.820e-71	75.17	Clat_adaptor_s domain-containing protein n=1 Tax=a...	[more]
B5YNE9_THAPS	2.130e-71	81.54	AP complex subunit sigma n=1 Tax=Thalassiosira pse...	[more]
A0A7S3JNG6_9STRA	3.220e-71	74.83	AP complex subunit sigma n=1 Tax=Aureoumbra lagune...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR016635	Adaptor protein complex, sigma subunit	PIRSF	PIRSF015588	AP_complex_sigma	coord: 1..137 e-value: 1.1E-43 score: 146.7
IPR016635	Adaptor protein complex, sigma subunit	PANTHER	PTHR11753	CLATHRIN COAT ASSEMBLY PROTEIN	coord: 4..145
None	No IPR available	GENE3D	3.30.450.60		coord: 1..138 e-value: 1.7E-48 score: 166.2
None	No IPR available	PANTHER	PTHR11753:SF10	AP-3 COMPLEX SUBUNIT SIGMA-2	coord: 4..145
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 3..128 e-value: 1.7E-38 score: 131.7
IPR000804	Clathrin adaptor complex, small chain	PROSITE	PS00989	CLAT_ADAPTOR_S	coord: 45..55
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 9..127

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dudresnayi_contig9666	contig	D-dudresnayi_contig9666:9636..11193 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dudresnayi_contig9666.28452.1	mRNA_D-dudresnayi_contig9666.28452.1	Desmarestia dudresnayi DdudBR16 monoicous	mRNA	D-dudresnayi_contig9666 9028..11193 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-dudresnayi_contig9666.28452.1 ID=prot_D-dudresnayi_contig9666.28452.1|Name=mRNA_D-dudresnayi_contig9666.28452.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=173bp
YTVQVGEEAQKSVIQRIFQQVAQRPDSFCNYLEGIIPEWGEGTKLIYRHY
ATLYFVFAVDAQESDLGILDLVQVFVEALDKCFENVCELDLIFHSDKVHY
VLDEIIMGGMVLETNINQILTAINDQNRLHAASNKVGLPPAGGINAHGRP
RSGHSGGGGGVGSSGLPGMRTR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016635	AP_complex_ssu
IPR022775	AP_mu_sigma_su
IPR000804	Clathrin_sm-chain_CS
IPR011012	Longin-like_dom_sf