mRNA_D-dudresnayi_contig1054.589.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig1054.589.1 vs. uniprot
Match: A0A6H5KZ19_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZ19_9PHAE) HSP 1 Score: 588 bits (1516), Expect = 3.160e-200 Identity = 308/533 (57.79%), Postives = 381/533 (71.48%), Query Frame = 2 Query: 2 CLKSVVRAAVHRPIRNRAQAGPVRPACPLCRETFSPEAVVTNTGVFQDMLKATVACRNGGCSAQFCPLRWKHHQEECPAASVQCLHHVVGCTWKGARRDLNCHVEGCAYEQIKGLIPRVSASLKQIHTQVHALEARVMAQNATVANRRAFVMSMHQRERRGAVFPAAYALLWRPPDWRRYNCPN-SDGVLADVTLVCLAPIAFLALWGTGIFGFAHRLSIDDSLVCLAGVAMLVCLAFLEYDNSTPWHELQRPLFLKGVRIGPPLLENTARFVVYSAMKSLRPWDRLPAILLLLAPLTYPTLVQGFHRFQVKLKNAQNQAQLAHSRPPMPPRNPVQPTPVKVHGSVVNGVVRAAAMLLFGPLTVLVGQGLSELGLCVASAIMGPSILNVVLEQVWVATSAGISPEEKEQLGRLNQRHFMAMRAPFPDLRGKRARFCVAAACLCLFWFLLSPLRDDVDTMVYGMLFIWLGDSMHLRCEIHISRWVMASLQQTSSRLNHDTERSRNPALDLLRSRLLLLWVVVGSLFFLVLMLTS 1597 CLKSVVRAA HR R GP LCRE F+PE V + +F++MLKATV CRNG C+AQFCPLRWK HQEECP+A VQC+HH+VGC W+GARRDL+ HVEGCAYE+IKGLIPRVSASLKQIHTQVH LEARVMAQNA VAN RA + HQR+ G+VFPA YALLWRPP+WR Y P GVL++VTL+CLAPI FLAL G G+FG L +++ VCL GVA+L +A LE+DN +P+HELQ P LKG+ IG LLE TAR +VY A+K L W R PA+L LLAPL YPT+VQ HRF+V++KNA NQAQ A ++PP+PP V+P VK HG+VVNGVVR MLL P+ LVG+ L++LG+ V SA +GP L+ LE VW+ S+GI+ ++K +L + + F +R P P++ + R +AA C+CLF +++ RD + + Y L + + DS H R E+H+ R VM SLQQT R N D +R A DLLRSRLLLLWVVVGS FFL+ MLTS Sbjct: 54 CLKSVVRAAAHRQ-RRSGNTGPXXXXXXLCREPFTPEVVQPSARIFEEMLKATVTCRNGDCAAQFCPLRWKKHQEECPSAVVQCMHHLVGCVWEGARRDLSLHVEGCAYEKIKGLIPRVSASLKQIHTQVHQLEARVMAQNAAVANTRALLA--HQRQA-GSVFPAVYALLWRPPNWRLYQSPRPGGGVLSNVTLICLAPILFLALCGAGVFGGGGGLVVEERAVCLVGVAILGFVALLEHDNESPYHELQTPSLLKGLAIGEFLLEGTARSMVYFALKGLPDWKRTPALLFLLAPLFYPTVVQAVHRFEVQVKNAHNQAQRARAQPPLPP---VEPVAVKTHGTVVNGVVRGTTMLLMNPVPALVGEVLAKLGVFVVSAALGPEKLDAFLEHVWLVMSSGIALDDKARLKKRHDSIFRDLRTPLPNMTDRTTRRLIAAVCVCLFAIIVAFFRDILQMVGYSRLLLSVLDSAHFRWELHVGRVVMGSLQQT--RTNQDPNFARTRARDLLRSRLLLLWVVVGSSFFLLFMLTS 577 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig1054.589.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig1054.589.1 >prot_D-dudresnayi_contig1054.589.1 ID=prot_D-dudresnayi_contig1054.589.1|Name=mRNA_D-dudresnayi_contig1054.589.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=485bp MLKATVACRNGGCSAQFCPLRWKHHQEECPAASVQCLHHVVGCTWKGARRback to top mRNA from alignment at D-dudresnayi_contig1054:20187..27513- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig1054.589.1 ID=mRNA_D-dudresnayi_contig1054.589.1|Name=mRNA_D-dudresnayi_contig1054.589.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=7327bp|location=Sequence derived from alignment at D-dudresnayi_contig1054:20187..27513- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig1054:20187..27513- >mRNA_D-dudresnayi_contig1054.589.1 ID=mRNA_D-dudresnayi_contig1054.589.1|Name=mRNA_D-dudresnayi_contig1054.589.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=2910bp|location=Sequence derived from alignment at D-dudresnayi_contig1054:20187..27513- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |