prot_D-dudresnayi_contig1054.589.1 (polypeptide) Desmarestia dudresnayi DdudBR16 monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_D-dudresnayi_contig1054.589.1
Unique Name	prot_D-dudresnayi_contig1054.589.1
Type	polypeptide
Organism	Desmarestia dudresnayi DdudBR16 monoicous (Desmarestia dudresnayi DdudBR16 monoicous)
Sequence length	485

Homology

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BLAST of mRNA_D-dudresnayi_contig1054.589.1 vs. uniprot
Match: A0A6H5KZ19_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZ19_9PHAE)

HSP 1 Score: 547 bits (1409), Expect = 1.830e-188
Identity = 285/485 (58.76%), Postives = 353/485 (72.78%), Query Frame = 0

Query:    1 MLKATVACRNGGCSAQFCPLRWKHHQEECPAASVQCLHHVVGCTWKGARRDLNCHVEGCAYEQIKGLIPRVSASLKQIHTQVHALEARVMAQNATVANRRAFVMSMHQRERRGAVFPAAYALLWRPPDWRRYNCPN-SDGVLADVTLVCLAPIAFLALWGTGIFGFAHRLSIDDSLVCLAGVAMLVCLAFLEYDNSTPWHELQRPLFLKGVRIGPPLLENTARFVVYSAMKSLRPWDRLPAILLLLAPLTYPTLVQGFHRFQVKLKNAQNQAQLAHSRPPMPPRNPVQPTPVKVHGSVVNGVVRAAAMLLFGPLTVLVGQGLSELGLCVASAIMGPSILNVVLEQVWVATSAGISPEEKEQLGRLNQRHFMAMRAPFPDLRGKRARFCVAAACLCLFWFLLSPLRDDVDTMVYGMLFIWLGDSMHLRCEIHISRWVMASLQQTSSRLNHDTERSRNPALDLLRSRLLLLWVVVGSLFFLVLMLTS 484
            MLKATV CRNG C+AQFCPLRWK HQEECP+A VQC+HH+VGC W+GARRDL+ HVEGCAYE+IKGLIPRVSASLKQIHTQVH LEARVMAQNA VAN RA +   HQR+  G+VFPA YALLWRPP+WR Y  P    GVL++VTL+CLAPI FLAL G G+FG    L +++  VCL GVA+L  +A LE+DN +P+HELQ P  LKG+ IG  LLE TAR +VY A+K L  W R PA+L LLAPL YPT+VQ  HRF+V++KNA NQAQ A ++PP+PP   V+P  VK HG+VVNGVVR   MLL  P+  LVG+ L++LG+ V SA +GP  L+  LE VW+  S+GI+ ++K +L + +   F  +R P P++  +  R  +AA C+CLF  +++  RD +  + Y  L + + DS H R E+H+ R VM SLQQT  R N D   +R  A DLLRSRLLLLWVVVGS FFL+ MLTS
Sbjct:  101 MLKATVTCRNGDCAAQFCPLRWKKHQEECPSAVVQCMHHLVGCVWEGARRDLSLHVEGCAYEKIKGLIPRVSASLKQIHTQVHQLEARVMAQNAAVANTRALLA--HQRQA-GSVFPAVYALLWRPPNWRLYQSPRPGGGVLSNVTLICLAPILFLALCGAGVFGGGGGLVVEERAVCLVGVAILGFVALLEHDNESPYHELQTPSLLKGLAIGEFLLEGTARSMVYFALKGLPDWKRTPALLFLLAPLFYPTVVQAVHRFEVQVKNAHNQAQRARAQPPLPP---VEPVAVKTHGTVVNGVVRGTTMLLMNPVPALVGEVLAKLGVFVVSAALGPEKLDAFLEHVWLVMSSGIALDDKARLKKRHDSIFRDLRTPLPNMTDRTTRRLIAAVCVCLFAIIVAFFRDILQMVGYSRLLLSVLDSAHFRWELHVGRVVMGSLQQT--RTNQDPNFARTRARDLLRSRLLLLWVVVGSSFFLLFMLTS 577

The following BLAST results are available for this feature:

BLAST of mRNA_D-dudresnayi_contig1054.589.1 vs. uniprot

BLAST of mRNA_D-dudresnayi_contig1054.589.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5KZ19_9PHAE	1.830e-188	58.76	RING-type domain-containing protein n=2 Tax=Ectoca...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 2..56 e-value: 2.4E-5 score: 26.5
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 175..192
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 428..464
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 238..257
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 404..408
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 409..427
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..139
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 484..484
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 465..483
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 386..403
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 193..237
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 258..385
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 140..163
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 164..174
None	No IPR available	TMHMM	TMhelix		coord: 238..260
None	No IPR available	TMHMM	TMhelix		coord: 465..482
None	No IPR available	TMHMM	TMhelix		coord: 386..403
None	No IPR available	TMHMM	TMhelix		coord: 140..162
IPR001293	Zinc finger, TRAF-type	PROSITE	PS50145	ZF_TRAF	coord: 25..64 score: 8.555
IPR008974	TRAF-like	SUPERFAMILY	49599	TRAF domain-like	coord: 4..86

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
D-dudresnayi_contig1054	contig	D-dudresnayi_contig1054:20914..24429 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Desmarestia dudresnayi DdudBR16 monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_D-dudresnayi_contig1054.589.1	mRNA_D-dudresnayi_contig1054.589.1	Desmarestia dudresnayi DdudBR16 monoicous	mRNA	D-dudresnayi_contig1054 20187..27513 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_D-dudresnayi_contig1054.589.1 ID=prot_D-dudresnayi_contig1054.589.1|Name=mRNA_D-dudresnayi_contig1054.589.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=485bp
MLKATVACRNGGCSAQFCPLRWKHHQEECPAASVQCLHHVVGCTWKGARR
DLNCHVEGCAYEQIKGLIPRVSASLKQIHTQVHALEARVMAQNATVANRR
AFVMSMHQRERRGAVFPAAYALLWRPPDWRRYNCPNSDGVLADVTLVCLA
PIAFLALWGTGIFGFAHRLSIDDSLVCLAGVAMLVCLAFLEYDNSTPWHE
LQRPLFLKGVRIGPPLLENTARFVVYSAMKSLRPWDRLPAILLLLAPLTY
PTLVQGFHRFQVKLKNAQNQAQLAHSRPPMPPRNPVQPTPVKVHGSVVNG
VVRAAAMLLFGPLTVLVGQGLSELGLCVASAIMGPSILNVVLEQVWVATS
AGISPEEKEQLGRLNQRHFMAMRAPFPDLRGKRARFCVAAACLCLFWFLL
SPLRDDVDTMVYGMLFIWLGDSMHLRCEIHISRWVMASLQQTSSRLNHDT
ERSRNPALDLLRSRLLLLWVVVGSLFFLVLMLTS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013083	Znf_RING/FYVE/PHD
IPR001293	Znf_TRAF
IPR008974	TRAF-like