mRNA_D-dudresnayi_contig10421.456.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10421.456.1 vs. uniprot
Match: A0A7S0XD73_9STRA (Arp2/3 complex 34 kDa subunit n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XD73_9STRA) HSP 1 Score: 297 bits (761), Expect = 1.600e-97 Identity = 139/274 (50.73%), Postives = 211/274 (77.01%), Query Frame = 3 Query: 42 MAAKGLIFLEAKSSILYEQLHPRILSDKREPCEITFNDFDDVLFKIFCSQETPNIVQVHIAMKNVEELKKMGSDDLLNTLFPGMEIAPADGFNYALQFDCDNLPGDANQFLNSVSELRRHIAGGPMDRAFNALLAKQSSNVPKMVIEYRKAEKVYVCPAASKVVVVFQVDFADVTDRALARVYLQEFVEAQRTVRTAPPVSYSKEPPGELAGLPTSFSTDTAGYIAFALEERHVAGAAKEKAITLLTGFRNYLHYHIKCSKTYLHMRMRKRVAG 863 MA KGL+FL++K++IL E L R+L R+ CE F+DFDDV +++ C + ++V+I+M+ + EL+ G+D +++ LFPG+E+ P +++A+QF+ ++ + + L +SEL+R++ GP++ AF+ALL+K S+++P +I YR E ++VCPA +K+VV+F VDF D+TD++LAR++LQEFVEAQR++RTAPPV++S+EPP ELA L +++ D G+++F LEERH+ G K+ AITLLTGFR+YL+YHIKCSKTYLHMRMRK+VAG Sbjct: 1 MATKGLVFLDSKNAILLETLQSRLLEGNRDECEFEFSDFDDVSYRVLCQGDN---IKVNISMRGLNELRSSGTDLVIDRLFPGLEVNPDPKYDFAIQFNISSI-SNPQKLLTDISELKRNLLSGPIEVAFDALLSKTSNHLPITIINYRPNETIFVCPAPAKIVVIFLVDFNDITDKSLARIFLQEFVEAQRSIRTAPPVNFSREPPLELANLRFTYNPDATGFLSFGLEERHITGDKKQTAITLLTGFRSYLYYHIKCSKTYLHMRMRKKVAG 270
BLAST of mRNA_D-dudresnayi_contig10421.456.1 vs. uniprot
Match: A0A812XCT5_SYMMI (Arp2/3 complex 34 kDa subunit n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812XCT5_SYMMI) HSP 1 Score: 241 bits (616), Expect = 1.530e-76 Identity = 117/204 (57.35%), Postives = 158/204 (77.45%), Query Frame = 3 Query: 252 MGSDDLLNTLFPGMEIAPADGFNYALQFDCDNLPGDANQFLNSVSELRRHIAGGPMDRAFNALLAKQSSNVPKMVIEYRKAEKVYVCPAASKVVVVFQVDFADVTDRALARVYLQEFVEAQRTVRTAPPVSYSKEPPGELAGLPTSFSTDTAGYIAFALEERHVAGAAKEKAITLLTGFRNYLHYHIKCSKTYLHMRMRKRVAG 863 +GS +LL FPGME P G++ A++FDCDNL + + L+ VS+++RH+ GGP+++AF L A S P + I+YRK +Y+CP+ SKVVV+F VDF D TD+A+ARV+L+EF EAQRTVRTAPPV++++EPP E+A + +++T+ AG+++FA EERHV G A+T+LTGFRNYLHYHIKCSKTYLHMRMRKRVAG Sbjct: 1 LGSSELLERHFPGMETRPDAGYDVAVEFDCDNL-ANPEETLSEVSQIKRHVLGGPLNKAFTTL-ATHGSPAPAVAIKYRKNGMMYICPSDSKVVVIFLVDFLDPTDQAIARVFLKEFEEAQRTVRTAPPVAFTREPPREIATMVGTYNTEAAGFLSFAFEERHVVGTQLNTAVTMLTGFRNYLHYHIKCSKTYLHMRMRKRVAG 202
BLAST of mRNA_D-dudresnayi_contig10421.456.1 vs. uniprot
Match: A0A482RR48_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RR48_9ARCH) HSP 1 Score: 224 bits (571), Expect = 9.470e-70 Identity = 110/174 (63.22%), Postives = 137/174 (78.74%), Query Frame = 3 Query: 342 DNLPGDANQFLNSVSELRRHIAGGPMDRAFNALLAKQSSNVPKMVIEYRKAEKVYVCPAASKVVVVFQVDFADVTDRALARVYLQEFVEAQRTVRTAPPVSYSKEPPGELAGLPTSFSTDTAGYIAFALEERHVAGAAKEKAITLLTGFRNYLHYHIKCSKTYLHMRMRKRVAG 863 D LP A QFLN+VSELRRH+ GP+D+AF ++LAK SSN+P IEYR E ++ P K++VVF VDF+DVTD+ALARV+LQEFVEAQR VR APPV+YS+E P L+ + + + AG+I+FA+E+RHV GA KEK +TLLTGFR YLHYHIKCSKTYLHMRMR++VA Sbjct: 28 DALPAPAEQFLNTVSELRRHMMAGPLDKAFGSMLAKTSSNLPITTIEYRAMEPTFIVPTEGKIIVVFAVDFSDVTDKALARVFLQEFVEAQRLVRNAPPVTYSREVPPTLSKVQYNHKPNLAGFISFAVEDRHVQGAGKEKVVTLLTGFRAYLHYHIKCSKTYLHMRMRRKVAS 201
BLAST of mRNA_D-dudresnayi_contig10421.456.1 vs. uniprot
Match: A0A6H5L1H1_9PHAE (Arp2/3 complex 34 kDa subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1H1_9PHAE) HSP 1 Score: 217 bits (552), Expect = 8.080e-66 Identity = 110/274 (40.15%), Postives = 170/274 (62.04%), Query Frame = 3 Query: 51 KGLIFLEAKSSILYEQLHPRILSDKREPCEITFNDFDDVLFKIFCSQETPNIVQVHIAMKNVEELKKMGSDDLLNTLFPGM---EIAPADGFNYALQFDCDNLPGDANQFLNSVSELRRHIAGGPMDRAFNALLAKQSSNVPKMVIEYRKAEKVYVCPAASKVVVVFQVDFADVTDRALARVYLQEFVEAQRTVRTAPPVSYSKEPPGELAGLPTSFSTDTAGYIAFALEERHVAGAAKEKAITLLTGFRNYLHYHIKCSKTYLHMRMRKRVAG 863 +G IFL++ + IL + PR++ KREPCE+ +DFDDV++ + + + + IA+ +++ G ++L T + GM ++ P G N + + DN A Q L S++EL+R++ P DRAF+AL + +VP I +RK E VYV P A +V ++F +DF + +RA+A+ +L EFV+AQR +PP +++ + P EL +P S G+++F + +HV +EK ITLLTGFRNYLHYH+K +KTY+HMRMRKRV G Sbjct: 8 QGQIFLDSFNPILENAIKPRLMEGKREPCELKVSDFDDVMYTVEVPPNNLSTLSLSIAINGWDQISSNGGSEVLATKYQGMISPQVRP--GHNLTITTNLDNPTVPAEQLLKSLTELKRNLMAAPFDRAFDALREGRGGSVPPAAIPWRKNEVVYVVPQADRVTIIFAIDFTESDERAIAKSFLMEFVDAQRVANNSPPCTFTPDAPLELKSMPMPPSHTPVGFLSFVIFPQHVDRGRQEKTITLLTGFRNYLHYHLKATKTYMHMRMRKRVVG 279
BLAST of mRNA_D-dudresnayi_contig10421.456.1 vs. uniprot
Match: A0A7S2RYF9_9STRA (Arp2/3 complex 34 kDa subunit n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RYF9_9STRA) HSP 1 Score: 209 bits (531), Expect = 2.010e-62 Identity = 117/281 (41.64%), Postives = 172/281 (61.21%), Query Frame = 3 Query: 48 AKGLIFLEAKSSILYEQLHPRILSD--KREPCEITFNDFDDVLFKIFCSQETPNIVQVHIAMKNVEELKK--MGSDDLLNTLFPGMEIAPADGFNYALQFDCDNLPGDANQFLNSVSELRRHIAGGPMDRAFNALLAKQSSNVPKMVIEYRKAEKVYVCPAASKVVVVFQVDFADVTDRALARVYLQEFVEAQRTVRTAPPVSYS--KEPPGELAGLP--TSFSTDTAGYIAFALEERHVAGAAK-EKAITLLTGFRNYLHYHIKCSKTYLHMRMRKRVAG 863 A+G+IFL+ ++ IL E + R+ D +REPCE+T DFDDV K+ + + N V VHI+M + + K + ++++ +PGM I P GF++A+ FD D+ P D LN V+ RR++ P+ +AF L + +P M IE R E +++ P A + +++ + F + TDRALARV LQ+F + V +APP YS K PP E+ LP +ST T G+I+F + HV+ AK +K+ +L FRNYLHYHIK SKTYLHMRMR++V G Sbjct: 18 AEGMIFLKPQNMILEEAIGTRLFDDPPRREPCEVTMADFDDVKLKVVVTPDRLNFVAVHISMGPLGKRLKTDLYGQEVMDETYPGMSITPDAGFDFAIGFDLDSPPEDPQVLLNKVANFRRYLLAAPITKAFKGLKNGTGATLPLMHIETRPNEAMFIKPGADRCTIIYALSFPEETDRALARVMLQQFAKESSKVNSAPPCQYSEAKNPPMEVRELPGIDKYST-TCGFISFVVFPSHVSSDAKFDKSAAMLANFRNYLHYHIKASKTYLHMRMRRKVQG 297
BLAST of mRNA_D-dudresnayi_contig10421.456.1 vs. uniprot
Match: T0RSJ4_SAPDV (Arp2/3 complex 34 kDa subunit n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RSJ4_SAPDV) HSP 1 Score: 201 bits (512), Expect = 7.580e-60 Identity = 119/274 (43.43%), Postives = 172/274 (62.77%), Query Frame = 3 Query: 57 LIFLEAKSSILYEQLHPRI---LSDKREPCEITFNDFDDVLFKIFCSQETPNIVQVHIAMKNVEELKKMGSDDLLNTLFPGMEI-APADGFNYALQFDCDNL-PGDANQFLNSVSELRRHIAGGPMDRAFNALLAKQSSNVPKMVIEYRKAEKVYVCPAASKVVVVFQVDFADVTDRALARVYLQEFVEAQRTVRTAPPVSYSKEPPGELAGLPT-SFSTDTAGYIAFALEERHVAGAAKE-KAITLLTGFRNYLHYHIKCSKTYLHMRMRKRV 857 +IFLE +S I+ E L R+ EP EI DFDDV + + + T + V ++ V EL K G+ ++L +++P + AP GF+ + + D + P +A ++ +S L+R++ P D F AL A SS++ + I +R+ E +YV P A ++V+VF V F D TD+A+AR++LQEF EA+R V APPVS+ K+PP EL G+P STD GY++FA+ + H+ AK KA TL+ GFRNYLHYHIK SKTY+H+RMRKRV Sbjct: 1 MIFLENESKIVQEVLQGRLGEAAPRPVEPLEIRLCDFDDVQYDLSIQENT---LSVSMSYPPVVELVKFGAANMLASVYPEFTLTAPKPGFDLTMVANVDAITPENATNVIDRISLLKRNLLSAPFDHCFLALHADASSSLSPIQIPFRRQETIYVLPQADRIVIVFSVAFQDKTDQAIARIFLQEFAEARRHVNNAPPVSFGKDPPLELRGVPNLRQSTDHVGYLSFAIFKTHIDTDAKRAKACTLIQGFRNYLHYHIKASKTYMHIRMRKRV 271
BLAST of mRNA_D-dudresnayi_contig10421.456.1 vs. uniprot
Match: A0A067CQD1_SAPPC (Arp2/3 complex 34 kDa subunit n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CQD1_SAPPC) HSP 1 Score: 200 bits (509), Expect = 2.140e-59 Identity = 118/274 (43.07%), Postives = 171/274 (62.41%), Query Frame = 3 Query: 57 LIFLEAKSSILYEQLHPRILSDKR---EPCEITFNDFDDVLFKIFCSQETPNIVQVHIAMKNVEELKKMGSDDLLNTLFPGMEI-APADGFNYALQFDCDNL-PGDANQFLNSVSELRRHIAGGPMDRAFNALLAKQSSNVPKMVIEYRKAEKVYVCPAASKVVVVFQVDFADVTDRALARVYLQEFVEAQRTVRTAPPVSYSKEPPGELAGLPT-SFSTDTAGYIAFALEERHVAGAAKE-KAITLLTGFRNYLHYHIKCSKTYLHMRMRKRV 857 +IFLE +S I+ E L R+ EP EI DFDDV + + + T + V ++ V EL K G+ ++L ++P + AP GF+ + + D + P +A ++ ++ L+R++ P D F AL A SS++ + I +R+ E +YV P A ++V+VF V F D TD+A+AR++LQEF EA+R V APPVS+ K+PP EL G+P STD GY++FA+ + H+ AK KA TL+ GFRNYLHYHIK SKTY+H+RMRKRV Sbjct: 1 MIFLENESKIVQEVLQGRLGETAPRPVEPLEIRLCDFDDVQYDLSIQENT---LSVSMSYPPVVELVKFGAANMLANVYPEFTLTAPKPGFDMTMVANVDAITPENATNVIDRIALLKRNLLSAPFDHCFLALHADASSSLSPIQIPFRRQETIYVLPQADRIVIVFSVAFQDKTDQAIARIFLQEFAEARRHVNNAPPVSFGKDPPLELRGVPNLRQSTDHVGYLSFAIFKTHIDSDAKRAKACTLVQGFRNYLHYHIKASKTYMHIRMRKRV 271
BLAST of mRNA_D-dudresnayi_contig10421.456.1 vs. uniprot
Match: K3WLT3_GLOUD (Arp2/3 complex 34 kDa subunit n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLT3_GLOUD) HSP 1 Score: 196 bits (499), Expect = 6.560e-58 Identity = 113/274 (41.24%), Postives = 172/274 (62.77%), Query Frame = 3 Query: 57 LIFLEAKSSILYEQLHPRILSDKR---EPCEITFNDFDDVLFKIFCSQETPNIVQVHIAMKNVEELKKMGSDDLLNTLFPGME-IAPADGFNYALQFDCDNL-PGDANQFLNSVSELRRHIAGGPMDRAFNALLAKQSSNVPKMVIEYRKAEKVYVCPAASKVVVVFQVDFADVTDRALARVYLQEFVEAQRTVRTAPPVSYSKEPPGELAGLP-TSFSTDTAGYIAFALEERHVAGAAKE-KAITLLTGFRNYLHYHIKCSKTYLHMRMRKRV 857 ++FLE ++ I+ E L RI +P EI DFDDV + + + N++ + +A + L+ +G+ + +T +P +AP GF++ALQ + D + P +A F+ ++ L+R+I P ++ F AL SS++ + I +R++E +YV P A ++V+V+ V F D TD+A+ARV+LQEFV+ +RTV APP ++SK+PP EL G P S+D GY++ A+ HV AK KA +L+ G RNYLHYHIK SKTYLH+RMRKRV Sbjct: 1 MLFLENENKIIKEVLEGRIGESAPRPVQPLEIRLCDFDDVQYDVSIAS---NLLTISMAYPPYKSLEGLGAQRMFSTTYPEFSLVAPKAGFDFALQVNVDVITPANATAFIERIASLKRNILAAPFEQCFEALANGTSSSLAPVQIPFRRSETMYVLPQADRIVIVYSVCFDDKTDQAIARVFLQEFVDTRRTVNGAPPAAFSKDPPLELRGAPGLRNSSDLVGYLSLAIFPTHVDTPAKRVKAASLIQGLRNYLHYHIKASKTYLHIRMRKRV 271
BLAST of mRNA_D-dudresnayi_contig10421.456.1 vs. uniprot
Match: A0A024U441_9STRA (Arp2/3 complex 34 kDa subunit n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U441_9STRA) HSP 1 Score: 193 bits (490), Expect = 1.510e-56 Identity = 119/276 (43.12%), Postives = 169/276 (61.23%), Query Frame = 3 Query: 57 LIFLEAKSSILYEQLHPRI---LSDKREPCEITFNDFDDVLFKIFCSQETPNIVQVHIAMKNVEELKKMGSDDLLNTLFPGMEI-APADGFNYALQFDCDNL-PGDANQFLNSVSELRRHIAGGPMDRAFNALLAKQSSNVPKMVIEYRKAEKVYVCPAASKVVVVFQVDFADVTDRALARVYLQEFVEAQRTVRTAPPVSYSKEPPGEL---AGLPTSFSTDTAGYIAFALEERHV-AGAAKEKAITLLTGFRNYLHYHIKCSKTYLHMRMRKRV 857 +IFLE +S I+ E L R+ +P EI DFDDV + I + V +A + EL+K G+ ++L ++P ++ AP GF L + D + P +A +N ++ L+R+I G P+D F AL A Q+ + + I +R+ E +Y+ P ++V+VF V F D TD+A+ARV+LQEF EA+R V APPVS+ K+PP EL +GL D GY++FA+ + H+ A +EKA TLL GFRNYLHYHIK SKTYLH+RMRKRV Sbjct: 1 MIFLENESKIVQEVLLGRLGEAAPRPVDPLEIRLCDFDDVQYDISIQGTA---LSVSMAYRPYIELQKFGAANMLAKVYPEFQVTAPKPGFELTLVANVDTITPQNAASVVNRIASLKRNILGAPLDHCFLALHAGQAKVLSPIQIPFRRQETIYILPQDDRIVIVFSVAFQDKTDQAIARVFLQEFAEARRHVNNAPPVSFGKDPPLELRAVSGLRPC--ADHVGYLSFAIFKSHIDTDAKREKACTLLQGFRNYLHYHIKASKTYLHIRMRKRV 271
BLAST of mRNA_D-dudresnayi_contig10421.456.1 vs. uniprot
Match: G4Z955_PHYSP (Arp2/3 complex 34 kDa subunit n=30 Tax=Peronosporaceae TaxID=4777 RepID=G4Z955_PHYSP) HSP 1 Score: 192 bits (487), Expect = 4.130e-56 Identity = 114/275 (41.45%), Postives = 171/275 (62.18%), Query Frame = 3 Query: 57 LIFLEAKSSILYEQLHPRILSDKRE----PCEITFNDFDDVLFKIFCSQETPNIVQVHIAMKNVEELKKMGSDDLLNTLFPGMEIAPAD-GFNYALQFDCDNL-PGDANQFLNSVSELRRHIAGGPMDRAFNALLAKQSSNVPKMVIEYRKAEKVYVCPAASKVVVVFQVDFADVTDRALARVYLQEFVEAQRTVRTAPPVSYSKEPPGELAGLP-TSFSTDTAGYIAFALEERHVAGAAKE-KAITLLTGFRNYLHYHIKCSKTYLHMRMRKRV 857 ++FLE+++ I+ E L R L +K P EI DFDDV + + + N++ V +A + L+ +G + +P ++ A GF+++LQ + D + P +A+ F++ +S L+R+I G P ++ F AL +S++ + I YR+ E +YV P A ++V+V+ V F D TD+A+ARV+LQEFV+ +RTV APPV++ K+PP EL G P S D GY++ A+ HV K KA TL+ G RNYLHYHIK SKTYLH+RMRKRV Sbjct: 1 MLFLESENKIIKEVLEGR-LGEKAPRPVPPLEIRLCDFDDVQYDLSIAD---NLLTVSMAYPPYKTLEGLGVTQMFAATYPECQLVAAKAGFDFSLQVNVDLITPANASSFIDRISVLKRNILGAPFEQCFEALQNGNASSLGPVQIPYRRNETIYVLPQADRIVIVYSVCFDDKTDQAIARVFLQEFVDTRRTVNNAPPVAFGKDPPLELRGAPGLRNSPDLVGYLSIAIFPTHVDTTEKRIKAATLVQGLRNYLHYHIKASKTYLHIRMRKRV 271 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10421.456.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10421.456.1 >prot_D-dudresnayi_contig10421.456.1 ID=prot_D-dudresnayi_contig10421.456.1|Name=mRNA_D-dudresnayi_contig10421.456.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=274bp MAAKGLIFLEAKSSILYEQLHPRILSDKREPCEITFNDFDDVLFKIFCSQback to top mRNA from alignment at D-dudresnayi_contig10421:8461..9581- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10421.456.1 ID=mRNA_D-dudresnayi_contig10421.456.1|Name=mRNA_D-dudresnayi_contig10421.456.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=1121bp|location=Sequence derived from alignment at D-dudresnayi_contig10421:8461..9581- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10421:8461..9581- >mRNA_D-dudresnayi_contig10421.456.1 ID=mRNA_D-dudresnayi_contig10421.456.1|Name=mRNA_D-dudresnayi_contig10421.456.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1644bp|location=Sequence derived from alignment at D-dudresnayi_contig10421:8461..9581- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |