mRNA_D-dudresnayi_contig10211.247.1 (mRNA) Desmarestia dudresnayi DdudBR16 monoicous
Overview
Homology
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A6H5JUC6_9PHAE (TOPEUc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUC6_9PHAE) HSP 1 Score: 348 bits (892), Expect = 9.230e-111 Identity = 167/203 (82.27%), Postives = 178/203 (87.68%), Query Frame = 1 Query: 22 PRKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLAEQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALNCA 630 P+K K++TR EKI +AM VY WWEEPAH PGKQWDSLEH GA FA EYKPHG+KLKYDGK+V LT QQEEVATFYASMPL+GPQLAEQG VFNKNFFTDFK VLGKGH IKDFKLLDFSAIRAHL+ KQIKRAATDGEKA AKT KEEL HKYSYAIVD HLEK+GNYNVEPP LFRGRG+HPKTG LKARV DIA+NCA Sbjct: 387 PKKPKKLTRAEKIEKAMKVYMWWEEPAHEPGKQWDSLEHNGAHFAPEYKPHGVKLKYDGKEVNLTTQQEEVATFYASMPLDGPQLAEQGKVFNKNFFTDFKAVLGKGHFIKDFKLLDFSAIRAHLDITKQIKRAATDGEKAAAKTVKEELVHKYSYAIVDGHLEKVGNYNVEPPGLFRGRGEHPKTGKLKARVTASDIAINCA 589
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: D7G042_ECTSI (TOPEUc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G042_ECTSI) HSP 1 Score: 346 bits (888), Expect = 4.460e-109 Identity = 168/204 (82.35%), Postives = 178/204 (87.25%), Query Frame = 1 Query: 22 PRKFKEMT-RTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLAEQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALNCA 630 P+ FKEMT R EKI +AM VY WWEEPAH PGKQWDSLEH GA FA EYKPHG+KLKYDGK+V+LT QQEEVATFYASMPL+GPQLAEQG VFNKNFFTDFK VLGKGH IKDFKLLDFSAIRAHL+ KQIK AATDGEKA AKT KEEL HKYSYAIVD HLEK+GNYNVEPP LFRGRG+HPKTG LKARV DIA+NCA Sbjct: 334 PKGFKEMTTRAEKIEKAMKVYMWWEEPAHEPGKQWDSLEHNGAHFAPEYKPHGVKLKYDGKEVHLTTQQEEVATFYASMPLDGPQLAEQGKVFNKNFFTDFKAVLGKGHVIKDFKLLDFSAIRAHLDITKQIKLAATDGEKAAAKTVKEELVHKYSYAIVDGHLEKVGNYNVEPPGLFRGRGEHPKTGKLKARVTASDIAINCA 537
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A7S2WTQ7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTQ7_9STRA) HSP 1 Score: 229 bits (584), Expect = 3.210e-67 Identity = 116/213 (54.46%), Postives = 141/213 (66.20%), Query Frame = 1 Query: 1 GASGETKPR---KFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLA--EQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 624 GA KP K K+ T+ E++ QAM YKWWE G+QW +LEH G F EYKPHG+ LKY+GKD+ L P EE+ATFY +P +GPQL E +F KNFFTDFK LG H+IK F+ DFSAIR H+E + IK+AAT+ EK AK K+ L KY YA+VD HLEKIGN EPPSLFRGRGKHP G +K RV+P + +N Sbjct: 128 GARKAAKPEAMGKLKKFTKVERLDQAMKSYKWWEHEDLPAGQQWRTLEHNGLCFPPEYKPHGVALKYEGKDLVLPPDLEELATFYGLVPDDGPQLGDPETRPIFQKNFFTDFKKALGGEHEIKKFQGCDFSAIREHIEKERLIKKAATEVEKQAAKEEKQSLQFKYGYALVDGHLEKIGNTMAEPPSLFRGRGKHPLMGKVKQRVLPEQVTIN 340
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A7S2MAS9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2MAS9_9STRA) HSP 1 Score: 216 bits (551), Expect = 3.430e-66 Identity = 100/200 (50.00%), Postives = 134/200 (67.00%), Query Frame = 1 Query: 31 FKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQL--AEQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 624 K++ ++E+I+ AM Y WW G+QW +EH G F Y+PHG+K++YDGK+V LTP +EE ATF+A+M +G L ++ +F KNFFTDFK +LGK H IKDFK DF+ I AHL+ K +++A TD E+ K K+ K+ YA+VD HLEK+GNYN+EPP FRGRG+HPK G LK RV P + LN Sbjct: 120 LKQLDKSERISHAMQAYLWWNADDPPKGQQWCKMEHAGVSFPEGYEPHGVKMRYDGKEVDLTPVEEEAATFFAAMDPDGMHLGNSKTAPIFKKNFFTDFKAILGKNHVIKDFKKCDFTPITAHLDEQKIVRKAITDAERKQNKNVKDTAMFKFGYALVDGHLEKVGNYNMEPPGAFRGRGEHPKMGKLKQRVDPEQVMLN 319
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: F0YL16_AURAN (TOPEUc domain-containing protein n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL16_AURAN) HSP 1 Score: 221 bits (564), Expect = 3.070e-65 Identity = 107/212 (50.47%), Postives = 140/212 (66.04%), Query Frame = 1 Query: 1 GASGETKPRKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLAEQGA---VFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALNC 627 G+ GE K K+M E Q + ++WW P GK W +LEH G F +YKPHGI + YDG + LTP QEE+ATFYA+MP +GPQL G +F +NF+ D+ VLGK H IK F DFS I HL+ K +KRAA+D EK VA+ +++ + YAI+DDHLEK+GN+ +EPPSLFRGRGKHPKTG++K RV P +++NC Sbjct: 51 GSDGEISAMKRKKMKSAE---QGIAAFEWWNSPDPPEGKAWQTLEHCGMTFEPQYKPHGIAMVYDGVPISLTPYQEELATFYAAMPEDGPQLNVSGGQREIFQRNFWDDWHKVLGKSHAIKSFDKCDFSDISKHLDRLKFVKRAASDAEKVVARELRDDCQLRSGYAILDDHLEKVGNFRMEPPSLFRGRGKHPKTGVVKLRVEPDQVSINC 259
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A836C9X0_9STRA (DNA topoisomerase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9X0_9STRA) HSP 1 Score: 222 bits (566), Expect = 3.690e-65 Identity = 102/189 (53.97%), Postives = 134/189 (70.90%), Query Frame = 1 Query: 70 MTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLAEQGA--VFNKNFFTDFKTVLGKGHKIKDFKL--LDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 624 + YKWWEEP APG+QW LEH G F EY+PHG+ L YDG+++ L+P+ EE+ATF+A +PL+GPQL + VF+ NFF+D+K + GH +K+ K DF A+RAHL+ + IK+AATDGE+A AK KE H + AIVD HLEK+GN+ +EPP LFRGRGKHPKTG LK R P ++ +N Sbjct: 53 LQAYKWWEEPPLAPGRQWSHLEHNGMSFPDEYEPHGVPLMYDGEEMELSPEDEEIATFFADVPLDGPQLGDAATAKVFSANFFSDWKESMPTGHPLKNAKFDKCDFGAMRAHLQQRRLIKKAATDGERAAAKAEKERRFHLFGLAIVDGHLEKVGNFIMEPPGLFRGRGKHPKTGKLKKRAYPSEVTVN 241
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A485L6E4_9STRA (DNA topoisomerase I n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L6E4_9STRA) HSP 1 Score: 221 bits (564), Expect = 6.760e-65 Identity = 104/202 (51.49%), Postives = 136/202 (67.33%), Query Frame = 1 Query: 25 RKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLA--EQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 624 RK K +++E++ A+ Y+WW G QW SLEH G LF S Y+PHG+ L Y+GK V LTP QEE+A+F+A+MPL+GPQL + +F KNFF DFK+ LGKGH IKD K DF IR HL + +K+ T EKA K K+E ++ +AIVD HLEK+GN+ +EPP LFRGRG+HPKTG LK V P ++ +N Sbjct: 97 RKLKVQSKSERLDMAIKSYRWWNADELPEGIQWRSLEHNGVLFPSVYEPHGVPLLYEGKPVDLTPAQEEIASFFAAMPLDGPQLGNPKTADMFTKNFFADFKSALGKGHAIKDIKKCDFEKIRTHLNELRDVKKERTKEEKAPEKAKKDEELFRHGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKKAVQPGEVTIN 298
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A7S3PD47_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3PD47_9STRA) HSP 1 Score: 219 bits (558), Expect = 1.210e-63 Identity = 99/204 (48.53%), Postives = 138/204 (67.65%), Query Frame = 1 Query: 25 RKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLA--EQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALNCA 630 R+ K++ +T+++ AM + WWE P A G W ++EH+G F EY+PHG+K+ YDG+ V LTP QEE ATF+A+M +G L + +F KNFF DF+ +LGK H IKDFK DF IR HL K I++A +D E+ K + + HKY YA+VD H+E++GN+N+EPP FRGRG+HPK G LK+RV P ++LNC+ Sbjct: 95 RQLKKLDKTDRLQYAMQAFLWWEAPVLAEGMNWSTMEHSGVSFPEEYEPHGVKMLYDGQPVDLTPAQEEAATFFAAMDPDGMHLGNPKTAPIFIKNFFADFREILGKKHIIKDFKKCDFEPIRKHLNEQKIIRKAISDKERQANKEDRNQTLHKYGYAVVDGHIERVGNFNMEPPGAFRGRGEHPKMGKLKSRVSPEQVSLNCS 298
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A6G0WXZ6_9STRA (TOPEUc domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WXZ6_9STRA) HSP 1 Score: 216 bits (550), Expect = 4.690e-63 Identity = 104/202 (51.49%), Postives = 131/202 (64.85%), Query Frame = 1 Query: 25 RKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLA--EQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 624 RK K ++E++ A+ Y+WW G QW SLEH G LF Y PHGI L YDG+ LTP+QEE+A+F+AS+PL+GPQL + A+F KNFF DFK LGK H IKD K DF IR HL T + ++ T EKA K K E + +AIVD HLEK+GN+ +EPP LFRGRG+HPKTG LK VMP ++ +N Sbjct: 83 RKLKVQNKSERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVLFPPTYVPHGIPLLYDGQPAELTPEQEEIASFFASIPLDGPQLGNPKTAAMFTKNFFADFKASLGKNHVIKDIKKCDFEKIRTHLNTLRDERKERTKEEKAPEKAKKNEELFHHGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKKAVMPEEVTIN 284
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Match: A0A024UDN4_9STRA (DNA topoisomerase I n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UDN4_9STRA) HSP 1 Score: 216 bits (549), Expect = 1.130e-62 Identity = 102/202 (50.50%), Postives = 134/202 (66.34%), Query Frame = 1 Query: 25 RKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALFASEYKPHGIKLKYDGKDVYLTPQQEEVATFYASMPLNGPQLA--EQGAVFNKNFFTDFKTVLGKGHKIKDFKLLDFSAIRAHLETAKQIKRAATDGEKAVAKTAKEELTHKYSYAIVDDHLEKIGNYNVEPPSLFRGRGKHPKTGMLKARVMPCDIALN 624 RK K ++E++ A+ Y+WW G QW SLEH G LF Y+PHGI L YDG V LTP+QEE+A+F+A+MP +GPQL + A+F KNFF DF+ LGK H IKD K +F I+AHL + K+ T EKA K K+E +++ +AIVD HLEK+GN+ +EPP LFRGRG+HPKTG LK VMP ++ +N Sbjct: 105 RKLKVQNKSERLDMAIKAYRWWNAEELPEGIQWRSLEHNGVLFPPSYEPHGIPLIYDGVPVTLTPEQEEIASFFAAMPADGPQLGNPKTAAMFTKNFFADFRASLGKNHVIKDIKKCNFERIQAHLNEIRDAKKERTKEEKAPEKAKKDEELYRHGFAIVDGHLEKVGNFRIEPPGLFRGRGEHPKTGTLKKAVMPEEVTIN 306 The following BLAST results are available for this feature:
BLAST of mRNA_D-dudresnayi_contig10211.247.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_D-dudresnayi_contig10211.247.1 >prot_D-dudresnayi_contig10211.247.1 ID=prot_D-dudresnayi_contig10211.247.1|Name=mRNA_D-dudresnayi_contig10211.247.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=polypeptide|length=210bp GASGETKPRKFKEMTRTEKIAQAMTVYKWWEEPAHAPGKQWDSLEHTGALback to top mRNA from alignment at D-dudresnayi_contig10211:4469..6763- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_D-dudresnayi_contig10211.247.1 ID=mRNA_D-dudresnayi_contig10211.247.1|Name=mRNA_D-dudresnayi_contig10211.247.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=mRNA|length=2295bp|location=Sequence derived from alignment at D-dudresnayi_contig10211:4469..6763- (Desmarestia dudresnayi DdudBR16 monoicous)back to top Coding sequence (CDS) from alignment at D-dudresnayi_contig10211:4469..6763- >mRNA_D-dudresnayi_contig10211.247.1 ID=mRNA_D-dudresnayi_contig10211.247.1|Name=mRNA_D-dudresnayi_contig10211.247.1|organism=Desmarestia dudresnayi DdudBR16 monoicous|type=CDS|length=1260bp|location=Sequence derived from alignment at D-dudresnayi_contig10211:4469..6763- (Desmarestia dudresnayi DdudBR16 monoicous)back to top |