prot_C-australica_Contig_10359.1.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_10359.1.1
Unique Nameprot_C-australica_Contig_10359.1.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length228
Homology
[Close]
BLAST of mRNA_C-australica_Contig_10359.1.1 vs. uniprot
Match: A0A2E2D7I4_9GAMM (Uncharacterized protein n=1 Tax=Methylophaga sp. TaxID=2024840 RepID=A0A2E2D7I4_9GAMM)

HSP 1 Score: 230 bits (587), Expect = 1.140e-68
Identity = 111/225 (49.33%), Postives = 148/225 (65.78%), Query Frame = 0 
Query:    4 RLPVPCPLQPGQSLPGLLSQAVVGNSYTSLGLLAQYFGVTDRPGGLSRVDLRHLAVGAVDTGQLAQFTEHTPEQIQAAALKLGPPCPGGRYDEYVSMHRWRYCPACIQSGKPHQRLWLLPFSTACPEHGCELVDACQDCDRPNAVNVVLMPHCAGCQTFAEARPAQAHEVECAATLNRHLDDEMELKRLLDRLMTAWFLSTSEALRPHYRFSPQLQTVAAMRDLV 228
            RLPVPC L+ G+SLPG LS+A   NSY S+  +A YFG+     GL +  ++ LA G+++   LA FTE   E+I+ AAL +  P PG   D+YVS  RWR+CP C++ G+PHQR W++ F TACPEH C+LVD CQ C    + N +L  +C  CQ  A+   A   E++CA  L+  +DD  +LK +LDRLM AWFL+    LRPHYR SPQL+TV+ MRD+V
Sbjct:    6 RLPVPCSLEEGESLPGFLSRATHINSYGSMFSIASYFGLNTNGKGLDKNQMKLLAKGSLNVSNLASFTESKTEEIRQAALDIRQPIPGTISDDYVSFQRWRFCPLCVREGRPHQRAWMISFVTACPEHRCQLVDDCQACGSEYSTNHMLTRYCVCCQKPAQIVDASEAELKCAEILSNLIDDRQKLKIVLDRLMLAWFLTNPNCLRPHYRVSPQLKTVSEMRDVV 230
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10359.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2E2D7I4_9GAMM1.140e-6849.33Uncharacterized protein n=1 Tax=Methylophaga sp. T... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009492TniQPFAMPF06527TniQcoord: 9..135
e-value: 8.8E-11
score: 42.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10359contigC-australica_Contig_10359:4..687 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10359.1.1mRNA_C-australica_Contig_10359.1.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_10359 4..687 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_10359.1.1 ID=prot_C-australica_Contig_10359.1.1|Name=mRNA_C-australica_Contig_10359.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=228bp
MKPRLPVPCPLQPGQSLPGLLSQAVVGNSYTSLGLLAQYFGVTDRPGGLS
RVDLRHLAVGAVDTGQLAQFTEHTPEQIQAAALKLGPPCPGGRYDEYVSM
HRWRYCPACIQSGKPHQRLWLLPFSTACPEHGCELVDACQDCDRPNAVNV
VLMPHCAGCQTFAEARPAQAHEVECAATLNRHLDDEMELKRLLDRLMTAW
FLSTSEALRPHYRFSPQLQTVAAMRDLV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009492TniQ