prot_C-australica_Contig_10320.1.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_10320.1.1
Unique Nameprot_C-australica_Contig_10320.1.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length235
Homology
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: A3UFY5_9PROT (PmbA protein n=3 Tax=Oceanicaulis TaxID=153232 RepID=A3UFY5_9PROT)

HSP 1 Score: 406 bits (1044), Expect = 5.180e-139
Identity = 197/234 (84.19%), Postives = 222/234 (94.87%), Query Frame = 0
Query:    1 SAGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGGR 234
            SAGERAV+R+G++KL+TGKMPV+FDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGER+F+EG+DIIEDPLRDWSFGARA D EG+AC+PRA+IEDGVLTTWLLNASSARQLGLELTGHA+RNLGG PGVGASNVHL  GELD+ GL+ EAGEG+L++EMFGPSLNANTGDWSVGVAGY I GG+ AGPVSE+TVAGNLLD FAR+VPGSDLEFDSAINAPS+L+D +S+GGR
Sbjct:  226 SAGERAVSRVGAEKLATGKMPVVFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERLFSEGVDIIEDPLRDWSFGARAVDAEGIACKPRALIEDGVLTTWLLNASSARQLGLELTGHAARNLGGAPGVGASNVHLTPGELDRDGLIAEAGEGVLVSEMFGPSLNANTGDWSVGVAGYAIKGGKLAGPVSEITVAGNLLDIFARLVPGSDLEFDSAINAPSVLVDNLSIGGR 459          
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: UPI001EE0C76E (TldD/PmbA family protein n=1 Tax=Shewanella sp. ER-Te-42B-Light TaxID=2872342 RepID=UPI001EE0C76E)

HSP 1 Score: 375 bits (963), Expect = 9.610e-127
Identity = 177/234 (75.64%), Postives = 215/234 (91.88%), Query Frame = 0
Query:    1 SAGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGGR 234
            SAGERAVARLGS K+++GK  V+FD+R S+ F+S+LLGAISGPAIARGTSFLRD++GER+FA+GI+IIEDPLRDWSFGARA DGEG+ACRPRA++EDGV+TTWL+NA+SARQLG+ LTGHASR+LGGPPGVGA+NVHL  GE     L+ EAG+GLL+TEMFGPSLNANTGDWSVGVAG+ I GG+RAGPVSEVTVAGNL+D FAR++PGSDLEF+ ++NAPS+L++G+S+GGR
Sbjct:  225 SAGERAVARLGSGKVASGKRSVVFDRRESSVFVSALLGAISGPAIARGTSFLRDRLGERVFADGINIIEDPLRDWSFGARAADGEGVACRPRALVEDGVVTTWLMNAASARQLGMALTGHASRSLGGPPGVGAANVHLEPGEASLDELIAEAGDGLLVTEMFGPSLNANTGDWSVGVAGFAIEGGKRAGPVSEVTVAGNLVDIFARLIPGSDLEFEGSVNAPSVLVEGLSIGGR 458          
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: A0A2U2BUL9_9PROT (Modulator protein n=1 Tax=Marinicauda salina TaxID=2135793 RepID=A0A2U2BUL9_9PROT)

HSP 1 Score: 369 bits (947), Expect = 2.990e-124
Identity = 179/232 (77.16%), Postives = 207/232 (89.22%), Query Frame = 0
Query:    2 AGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGG 233
            AGERA ARLG+++L TGK PV+FD+RV+T FIS+LLGAISGPAIARGTSFLRDKMGE +FA GIDI+EDPLR W FG+RA D EG+A +PRA+IEDGVLTTWLLNA+SARQL L LTGHASR+LG PPG G SNVHLA GELD+ GL+ EAG+GLL+TEMFGPSLNANTGDWSVGVAG+RIAGG  AGPVSE+TVAGNLLD F ++VPGSDLEFD A+NAPS+L++ +SVGG
Sbjct:  231 AGERAAARLGAERLPTGKQPVVFDRRVATAFISALLGAISGPAIARGTSFLRDKMGEAVFAPGIDILEDPLRAWGFGSRACDAEGVATKPRALIEDGVLTTWLLNAASARQLDLPLTGHASRHLGAPPGAGVSNVHLAAGELDRDGLIAEAGDGLLVTEMFGPSLNANTGDWSVGVAGFRIAGGRIAGPVSEITVAGNLLDIFKQLVPGSDLEFDHAVNAPSVLVEALSVGG 462          
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: A0A5M6ZG27_9PROT (TldD/PmbA family protein n=1 Tax=Alkalicaulis satelles TaxID=2609175 RepID=A0A5M6ZG27_9PROT)

HSP 1 Score: 366 bits (939), Expect = 4.160e-123
Identity = 172/233 (73.82%), Postives = 211/233 (90.56%), Query Frame = 0
Query:    2 AGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGGR 234
            AGERAVARLG+ KL++GK  V+F++R++  F+SSLLGAISGP+IARGTSFLR K+GER+FAEGIDIIEDPL+DWSFGARA DGEG+ACRPRA++EDGVLTTWLLNA+SARQLGL LTGHA R+LGGPPG GAS+V+LA GE     L+ EAGEGLL+T+MFGPSLNANTGDWSVGVAG+ I  G+RAGPVSE+TVAGNL+D FAR++PG+D+E+D A+N+PS+L++G+S+GGR
Sbjct:  226 AGERAVARLGAGKLASGKRSVVFERRLAGVFVSSLLGAISGPSIARGTSFLRGKLGERVFAEGIDIIEDPLKDWSFGARAADGEGVACRPRALVEDGVLTTWLLNAASARQLGLPLTGHARRSLGGPPGAGASHVNLAPGEASLDDLIAEAGEGLLVTDMFGPSLNANTGDWSVGVAGFAIEAGQRAGPVSEITVAGNLMDIFARLIPGADIEYDGALNSPSVLVEGLSIGGR 458          
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: A0A550KN93_9PROT (TldD/PmbA family protein n=1 Tax=Glycocaulis profundi TaxID=2518983 RepID=A0A550KN93_9PROT)

HSP 1 Score: 349 bits (896), Expect = 1.440e-116
Identity = 172/233 (73.82%), Postives = 200/233 (85.84%), Query Frame = 0
Query:    2 AGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGGR 234
            AGERA AR+G++K+++GKMPV+FD+R +   +  LLGAISGPAIARGTSFLR+KMGERIFAEGID+IEDPL+ W FG+RA DGEG+A RPRAIIEDG LTTWLLNASSARQLGLELTGHAS NLG PPGVGASNVHLA G   +A L+ +AG GLL+ EMFG SLNANTGDWSVGVAG+ I  G+   P SE+TVAGN+LD FAR+ PGSDLEFDSA+ +PSIL+DG+SVGGR
Sbjct:  228 AGERAAARVGAEKVASGKMPVVFDRRAADDILGYLLGAISGPAIARGTSFLREKMGERIFAEGIDVIEDPLKPWGFGSRAHDGEGVAARPRAIIEDGALTTWLLNASSARQLGLELTGHASPNLGSPPGVGASNVHLAPGGRSRAELISDAGTGLLVMEMFGASLNANTGDWSVGVAGFAIQDGKIGHPTSEITVAGNVLDIFARLEPGSDLEFDSAVVSPSILVDGLSVGGR 460          
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: A0A4S2GVZ3_9PROT (TldD/PmbA family protein n=1 Tax=Marinicauda algicola TaxID=2029849 RepID=A0A4S2GVZ3_9PROT)

HSP 1 Score: 347 bits (891), Expect = 8.200e-116
Identity = 171/233 (73.39%), Postives = 199/233 (85.41%), Query Frame = 0
Query:    2 AGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGGR 234
            AGERA ARLGS K+++GKMPV+FD+RV+TTF+SS LGAISGPAIARGTSFLR KMGER+FAEGIDIIEDPL+ W  G+RA DGEG+  R RA++EDGV+TTWLLNASSARQLGL LTGHAS+ LG PPG+  SNVHLA GE  +  L+ +AG GLL+TEMFGPSLN NTGDWSVGVAG+ I  G+ A PVSE+TVAGNLLD FAR+ PGSDLEF+ A NAPS+L+D +SVGGR
Sbjct:  228 AGERAAARLGSTKMASGKMPVVFDERVATTFVSSFLGAISGPAIARGTSFLRGKMGERVFAEGIDIIEDPLKPWGHGSRAFDGEGVPVRARALVEDGVVTTWLLNASSARQLGLPLTGHASQGLGSPPGIRTSNVHLAPGERTRQELIADAGNGLLVTEMFGPSLNENTGDWSVGVAGFAIENGKIAYPVSEMTVAGNLLDMFARLEPGSDLEFEHATNAPSVLVDALSVGGR 460          
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: A0A0P7W4Q9_9PROT (PmbA protein n=1 Tax=Oceanicaulis sp. HLUCCA04 TaxID=1666904 RepID=A0A0P7W4Q9_9PROT)

HSP 1 Score: 344 bits (882), Expect = 1.950e-114
Identity = 170/234 (72.65%), Postives = 200/234 (85.47%), Query Frame = 0
Query:    1 SAGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGGR 234
            SAGERA ARLGS+K+ +GKMPV+FD+RV+T+FI +LLGAISGPAIARGTSFLR+K  ERIFAEGIDIIEDPL+ W  G+RA DGEG+A RPRAIIEDGVLT W+LNA+SARQLGL LTGHAS + GGPPGV  SN+HLA GE  +  L+ +AG GLL+TEMFG SLN+NTGDWSVGVAG+RI  G+ AGPVSE TVAGN+LD FAR+ PGSDLEF   IN+PS+++D +SVGGR
Sbjct:  228 SAGERAAARLGSEKMRSGKMPVVFDERVATSFIGALLGAISGPAIARGTSFLREKNAERIFAEGIDIIEDPLKPWGHGSRAFDGEGVATRPRAIIEDGVLTGWILNAASARQLGLPLTGHASADPGGPPGVSVSNLHLAPGERSRDELISDAGTGLLVTEMFGASLNSNTGDWSVGVAGHRIENGKIAGPVSESTVAGNMLDIFARLQPGSDLEFSGRINSPSVIVDALSVGGR 461          
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: A0A4S2HD87_9PROT (TldD/PmbA family protein n=1 Tax=Marinicauda pacifica TaxID=1133559 RepID=A0A4S2HD87_9PROT)

HSP 1 Score: 343 bits (880), Expect = 3.790e-114
Identity = 169/232 (72.84%), Postives = 196/232 (84.48%), Query Frame = 0
Query:    2 AGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGG 233
            AGERA ARLGS K+  GKMPV+FD RV+TTF+SSLLGAISGPA+ARG SFL+ KMGER+FAEGIDI+EDPL+ W  G+RA DGEG+A R RA++EDGVLTTWLLNASSARQLGL LTGHAS+ LG PPGV  SNVHLA GE  +  L+ +AG GLL+TEMFGPSLN NTGDWSVGVAG+ I  G+ A PVSE+TVAGNL++ FAR+ PGSDLEFD A N+PSIL+D +SVGG
Sbjct:  228 AGERAAARLGSTKIKGGKMPVVFDSRVATTFVSSLLGAISGPAVARGNSFLKSKMGERVFAEGIDIVEDPLKAWGHGSRAFDGEGVAVRARALVEDGVLTTWLLNASSARQLGLPLTGHASQGLGSPPGVRTSNVHLAAGERSRDDLIADAGTGLLVTEMFGPSLNENTGDWSVGVAGFAIVDGKIAAPVSEMTVAGNLVEIFARLEPGSDLEFDHATNSPSILVDALSVGG 459          
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: A0A3T0EC71_9PROT (Microcin-processing peptidase PmbA n=5 Tax=Maricaulaceae TaxID=2800061 RepID=A0A3T0EC71_9PROT)

HSP 1 Score: 342 bits (878), Expect = 8.340e-114
Identity = 168/234 (71.79%), Postives = 200/234 (85.47%), Query Frame = 0
Query:    1 SAGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGGR 234
            SAGERAVARLG++K+ +GKMPV+FD+RV+T+F+ +LLGAISGP+IARGTSFLRDK G +IFAEGIDI+EDPL+ W  G+RA DGEG+A RPRAIIEDGVLT WLLNA+SARQLGL LTGHAS + GGPPGV  SN+HLA GE  +A L+ +AG GLL+TEMFG SLN+NTGDWSVGVAG+RI  G+  G +SE TVAGN+LD FAR+ PGSDLEF   INAPS+L+D +SVGGR
Sbjct:  230 SAGERAVARLGAEKMKSGKMPVVFDERVATSFLGALLGAISGPSIARGTSFLRDKNGAQIFAEGIDIVEDPLKPWGHGSRAFDGEGVATRPRAIIEDGVLTGWLLNAASARQLGLPLTGHASADPGGPPGVSVSNLHLAPGERSRAELIADAGNGLLVTEMFGASLNSNTGDWSVGVAGHRIENGKITGAISESTVAGNMLDIFARLQPGSDLEFSGRINAPSVLVDALSVGGR 463          
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: UPI00037DE363 (TldD/PmbA family protein n=1 Tax=Woodsholea maritima TaxID=240237 RepID=UPI00037DE363)

HSP 1 Score: 313 bits (802), Expect = 1.890e-102
Identity = 152/234 (64.96%), Postives = 186/234 (79.49%), Query Frame = 0
Query:    1 SAGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGGR 234
            SAGERA  RLGSDK+ +GK PVIFD R+STTFI SLLGAISGPAIARGTSFLRDK+G+++  EG+D+IEDPL+DW  G+RA DGEG+A  P +I+EDG+LTTWL N++SARQLG ELTGHA+RNLG PPGV  SNVHL+ GE     L+    +GL ITEMFGPSLN NTGDWSVGV+G RI  G    PVSEVTVAGN+++    +VP +DL+F  A N+PS+ +D +++GGR
Sbjct:  220 SAGERAARRLGSDKMPSGKKPVIFDNRISTTFIGSLLGAISGPAIARGTSFLRDKLGQQVLPEGLDLIEDPLKDWGHGSRAFDGEGVATYPTSIVEDGILTTWLHNSASARQLGQELTGHAARNLGAPPGVRTSNVHLSPGEDSLDSLITSITDGLYITEMFGPSLNGNTGDWSVGVSGLRIENGILTHPVSEVTVAGNMIEILLNLVPANDLDFRHATNSPSVYVDTLAIGGR 453          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A3UFY5_9PROT5.180e-13984.19PmbA protein n=3 Tax=Oceanicaulis TaxID=153232 Rep... [more]
UPI001EE0C76E9.610e-12775.64TldD/PmbA family protein n=1 Tax=Shewanella sp. ER... [more]
A0A2U2BUL9_9PROT2.990e-12477.16Modulator protein n=1 Tax=Marinicauda salina TaxID... [more]
A0A5M6ZG27_9PROT4.160e-12373.82TldD/PmbA family protein n=1 Tax=Alkalicaulis sate... [more]
A0A550KN93_9PROT1.440e-11673.82TldD/PmbA family protein n=1 Tax=Glycocaulis profu... [more]
A0A4S2GVZ3_9PROT8.200e-11673.39TldD/PmbA family protein n=1 Tax=Marinicauda algic... [more]
A0A0P7W4Q9_9PROT1.950e-11472.65PmbA protein n=1 Tax=Oceanicaulis sp. HLUCCA04 Tax... [more]
A0A4S2HD87_9PROT3.790e-11472.84TldD/PmbA family protein n=1 Tax=Marinicauda pacif... [more]
A0A3T0EC71_9PROT8.340e-11471.79Microcin-processing peptidase PmbA n=5 Tax=Maricau... [more]
UPI00037DE3631.890e-10264.96TldD/PmbA family protein n=1 Tax=Woodsholea mariti... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR045569Metalloprotease TldD/E, C-terminal domainPFAMPF19289PmbA_TldD_Ccoord: 17..233
e-value: 1.3E-58
score: 197.8
NoneNo IPR availablePANTHERPTHR43421METALLOPROTEASE PMBAcoord: 2..234
IPR036059Metalloprotease TldD/PmbA superfamilySUPERFAMILY111283Putative modulator of DNA gyrase, PmbA/TldDcoord: 2..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10320contigC-australica_Contig_10320:121..825 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10320.1.1mRNA_C-australica_Contig_10320.1.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_10320 121..825 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_10320.1.1 ID=prot_C-australica_Contig_10320.1.1|Name=mRNA_C-australica_Contig_10320.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=235bp
SAGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTS
FLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVL
TTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMK
EAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNL
LDFFARMVPGSDLEFDSAINAPSILIDGVSVGGR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR045569Metalloprtase-TldD/E_C
IPR036059TldD/PmbA_sf