mRNA_C-australica_Contig_10320.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: A3UFY5_9PROT (PmbA protein n=3 Tax=Oceanicaulis TaxID=153232 RepID=A3UFY5_9PROT) HSP 1 Score: 406 bits (1044), Expect = 5.180e-139 Identity = 197/234 (84.19%), Postives = 222/234 (94.87%), Query Frame = 1 Query: 1 SAGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGGR 702
SAGERAV+R+G++KL+TGKMPV+FDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGER+F+EG+DIIEDPLRDWSFGARA D EG+AC+PRA+IEDGVLTTWLLNASSARQLGLELTGHA+RNLGG PGVGASNVHL GELD+ GL+ EAGEG+L++EMFGPSLNANTGDWSVGVAGY I GG+ AGPVSE+TVAGNLLD FAR+VPGSDLEFDSAINAPS+L+D +S+GGR
Sbjct: 226 SAGERAVSRVGAEKLATGKMPVVFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERLFSEGVDIIEDPLRDWSFGARAVDAEGIACKPRALIEDGVLTTWLLNASSARQLGLELTGHAARNLGGAPGVGASNVHLTPGELDRDGLIAEAGEGVLVSEMFGPSLNANTGDWSVGVAGYAIKGGKLAGPVSEITVAGNLLDIFARLVPGSDLEFDSAINAPSVLVDNLSIGGR 459
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: UPI001EE0C76E (TldD/PmbA family protein n=1 Tax=Shewanella sp. ER-Te-42B-Light TaxID=2872342 RepID=UPI001EE0C76E) HSP 1 Score: 375 bits (963), Expect = 9.610e-127 Identity = 177/234 (75.64%), Postives = 215/234 (91.88%), Query Frame = 1 Query: 1 SAGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGGR 702
SAGERAVARLGS K+++GK V+FD+R S+ F+S+LLGAISGPAIARGTSFLRD++GER+FA+GI+IIEDPLRDWSFGARA DGEG+ACRPRA++EDGV+TTWL+NA+SARQLG+ LTGHASR+LGGPPGVGA+NVHL GE L+ EAG+GLL+TEMFGPSLNANTGDWSVGVAG+ I GG+RAGPVSEVTVAGNL+D FAR++PGSDLEF+ ++NAPS+L++G+S+GGR
Sbjct: 225 SAGERAVARLGSGKVASGKRSVVFDRRESSVFVSALLGAISGPAIARGTSFLRDRLGERVFADGINIIEDPLRDWSFGARAADGEGVACRPRALVEDGVVTTWLMNAASARQLGMALTGHASRSLGGPPGVGAANVHLEPGEASLDELIAEAGDGLLVTEMFGPSLNANTGDWSVGVAGFAIEGGKRAGPVSEVTVAGNLVDIFARLIPGSDLEFEGSVNAPSVLVEGLSIGGR 458
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: A0A2U2BUL9_9PROT (Modulator protein n=1 Tax=Marinicauda salina TaxID=2135793 RepID=A0A2U2BUL9_9PROT) HSP 1 Score: 369 bits (947), Expect = 2.990e-124 Identity = 179/232 (77.16%), Postives = 207/232 (89.22%), Query Frame = 1 Query: 4 AGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGG 699
AGERA ARLG+++L TGK PV+FD+RV+T FIS+LLGAISGPAIARGTSFLRDKMGE +FA GIDI+EDPLR W FG+RA D EG+A +PRA+IEDGVLTTWLLNA+SARQL L LTGHASR+LG PPG G SNVHLA GELD+ GL+ EAG+GLL+TEMFGPSLNANTGDWSVGVAG+RIAGG AGPVSE+TVAGNLLD F ++VPGSDLEFD A+NAPS+L++ +SVGG
Sbjct: 231 AGERAAARLGAERLPTGKQPVVFDRRVATAFISALLGAISGPAIARGTSFLRDKMGEAVFAPGIDILEDPLRAWGFGSRACDAEGVATKPRALIEDGVLTTWLLNAASARQLDLPLTGHASRHLGAPPGAGVSNVHLAAGELDRDGLIAEAGDGLLVTEMFGPSLNANTGDWSVGVAGFRIAGGRIAGPVSEITVAGNLLDIFKQLVPGSDLEFDHAVNAPSVLVEALSVGG 462
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: A0A5M6ZG27_9PROT (TldD/PmbA family protein n=1 Tax=Alkalicaulis satelles TaxID=2609175 RepID=A0A5M6ZG27_9PROT) HSP 1 Score: 366 bits (939), Expect = 4.160e-123 Identity = 172/233 (73.82%), Postives = 211/233 (90.56%), Query Frame = 1 Query: 4 AGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGGR 702
AGERAVARLG+ KL++GK V+F++R++ F+SSLLGAISGP+IARGTSFLR K+GER+FAEGIDIIEDPL+DWSFGARA DGEG+ACRPRA++EDGVLTTWLLNA+SARQLGL LTGHA R+LGGPPG GAS+V+LA GE L+ EAGEGLL+T+MFGPSLNANTGDWSVGVAG+ I G+RAGPVSE+TVAGNL+D FAR++PG+D+E+D A+N+PS+L++G+S+GGR
Sbjct: 226 AGERAVARLGAGKLASGKRSVVFERRLAGVFVSSLLGAISGPSIARGTSFLRGKLGERVFAEGIDIIEDPLKDWSFGARAADGEGVACRPRALVEDGVLTTWLLNAASARQLGLPLTGHARRSLGGPPGAGASHVNLAPGEASLDDLIAEAGEGLLVTDMFGPSLNANTGDWSVGVAGFAIEAGQRAGPVSEITVAGNLMDIFARLIPGADIEYDGALNSPSVLVEGLSIGGR 458
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: A0A550KN93_9PROT (TldD/PmbA family protein n=1 Tax=Glycocaulis profundi TaxID=2518983 RepID=A0A550KN93_9PROT) HSP 1 Score: 349 bits (896), Expect = 1.440e-116 Identity = 172/233 (73.82%), Postives = 200/233 (85.84%), Query Frame = 1 Query: 4 AGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGGR 702
AGERA AR+G++K+++GKMPV+FD+R + + LLGAISGPAIARGTSFLR+KMGERIFAEGID+IEDPL+ W FG+RA DGEG+A RPRAIIEDG LTTWLLNASSARQLGLELTGHAS NLG PPGVGASNVHLA G +A L+ +AG GLL+ EMFG SLNANTGDWSVGVAG+ I G+ P SE+TVAGN+LD FAR+ PGSDLEFDSA+ +PSIL+DG+SVGGR
Sbjct: 228 AGERAAARVGAEKVASGKMPVVFDRRAADDILGYLLGAISGPAIARGTSFLREKMGERIFAEGIDVIEDPLKPWGFGSRAHDGEGVAARPRAIIEDGALTTWLLNASSARQLGLELTGHASPNLGSPPGVGASNVHLAPGGRSRAELISDAGTGLLVMEMFGASLNANTGDWSVGVAGFAIQDGKIGHPTSEITVAGNVLDIFARLEPGSDLEFDSAVVSPSILVDGLSVGGR 460
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: A0A4S2GVZ3_9PROT (TldD/PmbA family protein n=1 Tax=Marinicauda algicola TaxID=2029849 RepID=A0A4S2GVZ3_9PROT) HSP 1 Score: 347 bits (891), Expect = 8.200e-116 Identity = 171/233 (73.39%), Postives = 199/233 (85.41%), Query Frame = 1 Query: 4 AGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGGR 702
AGERA ARLGS K+++GKMPV+FD+RV+TTF+SS LGAISGPAIARGTSFLR KMGER+FAEGIDIIEDPL+ W G+RA DGEG+ R RA++EDGV+TTWLLNASSARQLGL LTGHAS+ LG PPG+ SNVHLA GE + L+ +AG GLL+TEMFGPSLN NTGDWSVGVAG+ I G+ A PVSE+TVAGNLLD FAR+ PGSDLEF+ A NAPS+L+D +SVGGR
Sbjct: 228 AGERAAARLGSTKMASGKMPVVFDERVATTFVSSFLGAISGPAIARGTSFLRGKMGERVFAEGIDIIEDPLKPWGHGSRAFDGEGVPVRARALVEDGVVTTWLLNASSARQLGLPLTGHASQGLGSPPGIRTSNVHLAPGERTRQELIADAGNGLLVTEMFGPSLNENTGDWSVGVAGFAIENGKIAYPVSEMTVAGNLLDMFARLEPGSDLEFEHATNAPSVLVDALSVGGR 460
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: A0A0P7W4Q9_9PROT (PmbA protein n=1 Tax=Oceanicaulis sp. HLUCCA04 TaxID=1666904 RepID=A0A0P7W4Q9_9PROT) HSP 1 Score: 344 bits (882), Expect = 1.950e-114 Identity = 170/234 (72.65%), Postives = 200/234 (85.47%), Query Frame = 1 Query: 1 SAGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGGR 702
SAGERA ARLGS+K+ +GKMPV+FD+RV+T+FI +LLGAISGPAIARGTSFLR+K ERIFAEGIDIIEDPL+ W G+RA DGEG+A RPRAIIEDGVLT W+LNA+SARQLGL LTGHAS + GGPPGV SN+HLA GE + L+ +AG GLL+TEMFG SLN+NTGDWSVGVAG+RI G+ AGPVSE TVAGN+LD FAR+ PGSDLEF IN+PS+++D +SVGGR
Sbjct: 228 SAGERAAARLGSEKMRSGKMPVVFDERVATSFIGALLGAISGPAIARGTSFLREKNAERIFAEGIDIIEDPLKPWGHGSRAFDGEGVATRPRAIIEDGVLTGWILNAASARQLGLPLTGHASADPGGPPGVSVSNLHLAPGERSRDELISDAGTGLLVTEMFGASLNSNTGDWSVGVAGHRIENGKIAGPVSESTVAGNMLDIFARLQPGSDLEFSGRINSPSVIVDALSVGGR 461
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: A0A4S2HD87_9PROT (TldD/PmbA family protein n=1 Tax=Marinicauda pacifica TaxID=1133559 RepID=A0A4S2HD87_9PROT) HSP 1 Score: 343 bits (880), Expect = 3.790e-114 Identity = 169/232 (72.84%), Postives = 196/232 (84.48%), Query Frame = 1 Query: 4 AGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGG 699
AGERA ARLGS K+ GKMPV+FD RV+TTF+SSLLGAISGPA+ARG SFL+ KMGER+FAEGIDI+EDPL+ W G+RA DGEG+A R RA++EDGVLTTWLLNASSARQLGL LTGHAS+ LG PPGV SNVHLA GE + L+ +AG GLL+TEMFGPSLN NTGDWSVGVAG+ I G+ A PVSE+TVAGNL++ FAR+ PGSDLEFD A N+PSIL+D +SVGG
Sbjct: 228 AGERAAARLGSTKIKGGKMPVVFDSRVATTFVSSLLGAISGPAVARGNSFLKSKMGERVFAEGIDIVEDPLKAWGHGSRAFDGEGVAVRARALVEDGVLTTWLLNASSARQLGLPLTGHASQGLGSPPGVRTSNVHLAAGERSRDDLIADAGTGLLVTEMFGPSLNENTGDWSVGVAGFAIVDGKIAAPVSEMTVAGNLVEIFARLEPGSDLEFDHATNSPSILVDALSVGG 459
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: A0A3T0EC71_9PROT (Microcin-processing peptidase PmbA n=5 Tax=Maricaulaceae TaxID=2800061 RepID=A0A3T0EC71_9PROT) HSP 1 Score: 342 bits (878), Expect = 8.340e-114 Identity = 168/234 (71.79%), Postives = 200/234 (85.47%), Query Frame = 1 Query: 1 SAGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGGR 702
SAGERAVARLG++K+ +GKMPV+FD+RV+T+F+ +LLGAISGP+IARGTSFLRDK G +IFAEGIDI+EDPL+ W G+RA DGEG+A RPRAIIEDGVLT WLLNA+SARQLGL LTGHAS + GGPPGV SN+HLA GE +A L+ +AG GLL+TEMFG SLN+NTGDWSVGVAG+RI G+ G +SE TVAGN+LD FAR+ PGSDLEF INAPS+L+D +SVGGR
Sbjct: 230 SAGERAVARLGAEKMKSGKMPVVFDERVATSFLGALLGAISGPSIARGTSFLRDKNGAQIFAEGIDIVEDPLKPWGHGSRAFDGEGVATRPRAIIEDGVLTGWLLNAASARQLGLPLTGHASADPGGPPGVSVSNLHLAPGERSRAELIADAGNGLLVTEMFGASLNSNTGDWSVGVAGHRIENGKITGAISESTVAGNMLDIFARLQPGSDLEFSGRINAPSVLVDALSVGGR 463
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Match: UPI00037DE363 (TldD/PmbA family protein n=1 Tax=Woodsholea maritima TaxID=240237 RepID=UPI00037DE363) HSP 1 Score: 313 bits (802), Expect = 1.890e-102 Identity = 152/234 (64.96%), Postives = 186/234 (79.49%), Query Frame = 1 Query: 1 SAGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSFLRDKMGERIFAEGIDIIEDPLRDWSFGARATDGEGLACRPRAIIEDGVLTTWLLNASSARQLGLELTGHASRNLGGPPGVGASNVHLADGELDQAGLMKEAGEGLLITEMFGPSLNANTGDWSVGVAGYRIAGGERAGPVSEVTVAGNLLDFFARMVPGSDLEFDSAINAPSILIDGVSVGGR 702
SAGERA RLGSDK+ +GK PVIFD R+STTFI SLLGAISGPAIARGTSFLRDK+G+++ EG+D+IEDPL+DW G+RA DGEG+A P +I+EDG+LTTWL N++SARQLG ELTGHA+RNLG PPGV SNVHL+ GE L+ +GL ITEMFGPSLN NTGDWSVGV+G RI G PVSEVTVAGN+++ +VP +DL+F A N+PS+ +D +++GGR
Sbjct: 220 SAGERAARRLGSDKMPSGKKPVIFDNRISTTFIGSLLGAISGPAIARGTSFLRDKLGQQVLPEGLDLIEDPLKDWGHGSRAFDGEGVATYPTSIVEDGILTTWLHNSASARQLGQELTGHAARNLGAPPGVRTSNVHLSPGEDSLDSLITSITDGLYITEMFGPSLNGNTGDWSVGVSGLRIENGILTHPVSEVTVAGNMIEILLNLVPANDLDFRHATNSPSVYVDTLAIGGR 453 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10320.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10320.1.1 >prot_C-australica_Contig_10320.1.1 ID=prot_C-australica_Contig_10320.1.1|Name=mRNA_C-australica_Contig_10320.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=235bp SAGERAVARLGSDKLSTGKMPVIFDKRVSTTFISSLLGAISGPAIARGTSback to top mRNA from alignment at C-australica_Contig_10320:121..825- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10320.1.1 ID=mRNA_C-australica_Contig_10320.1.1|Name=mRNA_C-australica_Contig_10320.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=705bp|location=Sequence derived from alignment at C-australica_Contig_10320:121..825- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10320:121..825- >mRNA_C-australica_Contig_10320.1.1 ID=mRNA_C-australica_Contig_10320.1.1|Name=mRNA_C-australica_Contig_10320.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=705bp|location=Sequence derived from alignment at C-australica_Contig_10320:121..825- (Chrysoparadoxa australica CS_1217)back to top |