prot_C-australica_Contig_1032.3.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1032.3.1
Unique Nameprot_C-australica_Contig_1032.3.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length93
Homology
BLAST of mRNA_C-australica_Contig_1032.3.1 vs. uniprot
Match: A0A7S4JP54_9STRA (Protein xylosyltransferase n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4JP54_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 8.420e-16
Identity = 42/97 (43.30%), Postives = 57/97 (58.76%), Query Frame = 0
Query:    1 LHVGSQWFVIPPSYAAWLLNDT--ALVPHFTQYAQHIVVADEVFFSTLLKHSPHCHDHVNENFLYASFSS---NKEH-------CLMPSPTHCGRSP 85
            L   SQWF++   +A +L +     LV    +YA+H+VVADE FF T+L+H+ +CH H N NFL+  F     +KE        C+MP P HCGRSP
Sbjct:  253 LMTSSQWFILSREFAKYLADAAPGTLVHDMLEYAEHMVVADEQFFGTVLRHTKYCHKHHNGNFLFLEFGKWEDSKEEEARDPRKCVMPDPNHCGRSP 349          
BLAST of mRNA_C-australica_Contig_1032.3.1 vs. uniprot
Match: A0A7S2UAF3_9STRA (Protein xylosyltransferase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UAF3_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 4.030e-15
Identity = 39/97 (40.21%), Postives = 53/97 (54.64%), Query Frame = 0
Query:    1 LHVGSQWFVIPPSYAAWLLNDT--ALVPHFTQYAQHIVVADEVFFSTLLKHSPHCHDHVNENFLYASFSS----------NKEHCLMPSPTHCGRSP 85
            L+  SQWFV+   +A +L +      V  F  Y +H+ +ADE FF T+L ++P CH H N+NFL+  F            +   CLMP P HCGRSP
Sbjct:  391 LYTASQWFVLSREFAKYLADPLPGTFVFDFLPYVEHVAIADETFFGTVLMNTPFCHKHHNDNFLHLQFDRWENEVDEEKRDPRKCLMPKPDHCGRSP 487          
BLAST of mRNA_C-australica_Contig_1032.3.1 vs. uniprot
Match: A0A1Z5KH39_FISSO (Protein xylosyltransferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KH39_FISSO)

HSP 1 Score: 77.4 bits (189), Expect = 1.400e-14
Identity = 38/97 (39.18%), Postives = 53/97 (54.64%), Query Frame = 0
Query:    1 LHVGSQWFVIPPSYAAWLLNDT--ALVPHFTQYAQHIVVADEVFFSTLLKHSPHCHDHVNENFLYASFSS----------NKEHCLMPSPTHCGRSP 85
            +   SQWF+I   +A +L      + V  +  Y +H+VVADE FF T+L+H+  CH H N NFL+  F            ++  C MP+P HCGRSP
Sbjct:  372 MFTSSQWFIISRDFAEYLATPEPGSFVHDYLTYIEHVVVADETFFGTVLRHTSFCHQHHNRNFLHLQFDRWESELPAGLRDERKCPMPNPDHCGRSP 468          
BLAST of mRNA_C-australica_Contig_1032.3.1 vs. uniprot
Match: B7FSV5_PHATC (Protein xylosyltransferase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSV5_PHATC)

HSP 1 Score: 75.9 bits (185), Expect = 4.870e-14
Identity = 41/103 (39.81%), Postives = 56/103 (54.37%), Query Frame = 0
Query:    1 LHVGSQWFVIPPSYAAWLLNDTA--LVPHFTQYAQHIVVADEVFFSTLLKHSPHCHDHVNENFLYASF--------SSNKE--HCLMPSPTHCGRSPKASPGD 91
            L   SQWF+I   +A +L    A   V  +  Y +H+VVADE FF T+L+H+P C  H N NFL+  F        S++++   C+M  P HCGRSP     D
Sbjct:  341 LFTSSQWFIISREFAEYLARAEAGTFVHQYLDYIEHVVVADETFFGTVLRHTPFCLKHHNRNFLHLQFDRWESELPSNDRDPRKCMMLDPNHCGRSPTTLTAD 443          
BLAST of mRNA_C-australica_Contig_1032.3.1 vs. uniprot
Match: A0A7S3V934_9STRA (Protein xylosyltransferase (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3V934_9STRA)

HSP 1 Score: 74.7 bits (182), Expect = 5.520e-14
Identity = 39/99 (39.39%), Postives = 52/99 (52.53%), Query Frame = 0
Query:    1 LHVGSQWFVIPPSYAAWLLNDT----ALVPHFTQYAQHIVVADEVFFSTLLKHSPHCHDHVNENFLYASFSS----------NKEHCLMPSPTHCGRSP 85
            LH  SQWF+I   +A +    +      V  + QYA+H+VVADE FF T+L+H+  C  H N NFLY +F            +   C+M  P  CGRSP
Sbjct:   70 LHTSSQWFIISREFAEYFATASDQPGTFVHEYIQYAEHVVVADEHFFGTVLRHTEFCTKHHNSNFLYLTFDRWESDMPNFERDPRKCIMVDPDKCGRSP 168          
BLAST of mRNA_C-australica_Contig_1032.3.1 vs. uniprot
Match: A0A8J2SSV4_9STRA (Protein xylosyltransferase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SSV4_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 8.960e-14
Identity = 40/102 (39.22%), Postives = 56/102 (54.90%), Query Frame = 0
Query:    1 LHVGSQWFVIPPSYAAWLLNDTA------LVPHFTQYAQHIVVADEVFFSTLLKHSPHCHDHVNENFLYASF-----------SSNKEHCLMPSPTHCGRSP 85
            +++GSQW VI   +AA+     +          +  Y ++ +VADE FF+T+LK+SP CH H N+NFL+  F           + NK  CL P P HCGRSP
Sbjct:  289 MYMGSQWMVITRDFAAYATGRESPRQRRSFASQYAPYGRYTMVADENFFTTVLKNSPMCHKHYNQNFLHVQFDQWESDKVEGPAQNK--CLQPDPRHCGRSP 388          
BLAST of mRNA_C-australica_Contig_1032.3.1 vs. uniprot
Match: A0A1Z5KSA0_FISSO (Protein xylosyltransferase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KSA0_FISSO)

HSP 1 Score: 74.3 bits (181), Expect = 1.690e-13
Identity = 37/97 (38.14%), Postives = 52/97 (53.61%), Query Frame = 0
Query:    1 LHVGSQWFVIPPSYAAWLLNDT--ALVPHFTQYAQHIVVADEVFFSTLLKHSPHCHDHVNENFLYASFSS----------NKEHCLMPSPTHCGRSP 85
            +   SQWF+I   +A +L      + V  +  Y +H+VVADE FF T+L+H+  C  H N NFL+  F            ++  C MP+P HCGRSP
Sbjct:  365 MFTSSQWFIISRDFAEYLATPEPGSFVHDYLTYIEHVVVADETFFGTVLRHTSFCRQHHNRNFLHLQFDRWESELPAGLRDERKCPMPNPDHCGRSP 461          
BLAST of mRNA_C-australica_Contig_1032.3.1 vs. uniprot
Match: A0A7S2L4F4_9STRA (Protein xylosyltransferase (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2L4F4_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 1.070e-12
Identity = 37/98 (37.76%), Postives = 55/98 (56.12%), Query Frame = 0
Query:    1 LHVGSQWFVIPPSYAAWLLND--TALVPHFTQYAQHIVVADEVFFSTLLKHSPHCHDHVNENFLYASFSS-----------NKEHCLMPSPTHCGRSP 85
            +H  SQWF+I   +A ++ N    +LV +   Y +H+VVADE FF T+L+++  C    N+NFL+  F S           +   C+M +P HCGRSP
Sbjct:   74 IHTSSQWFIISREFAWYIANPPKNSLVDYLRDYMEHVVVADESFFGTVLRNTHFCSTLHNDNFLHIQFGSWENEDKSANQRDPRKCVMRNPDHCGRSP 171          
BLAST of mRNA_C-australica_Contig_1032.3.1 vs. uniprot
Match: B8LEP4_THAPS (Protein xylosyltransferase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEP4_THAPS)

HSP 1 Score: 63.5 bits (153), Expect = 1.490e-10
Identity = 32/96 (33.33%), Postives = 53/96 (55.21%), Query Frame = 0
Query:    1 LHVGSQWFVIPPSYAAWLLNDT--ALVPHFTQYAQHIVVADEVFFSTLLKHSPHCHDHVNENFLYASFSS---------NKEHCLMPSPTHCGRSP 85
            ++  SQWF+I   +A +L +    + V ++  Y +H+VVADE FF T+++++  C    N+NFL+  F           ++  CL  +  HCGRSP
Sbjct:   27 IYTSSQWFIISRDFAWYLASPPKDSFVDYYLDYIEHVVVADEAFFGTVIRNTHFCSTLHNDNFLHIQFDRWENEAEGERDQRKCLFKNRDHCGRSP 122          
BLAST of mRNA_C-australica_Contig_1032.3.1 vs. uniprot
Match: A0A7S4RM73_9STRA (Protein xylosyltransferase (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RM73_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 2.030e-10
Identity = 35/97 (36.08%), Postives = 49/97 (50.52%), Query Frame = 0
Query:    1 LHVGSQWFVIPPSYAAWLLNDT--ALVPHFTQYAQHIVVADEVFFSTLLKHSPHCHDHVNENFLYASFS--SNKEH--------CLMPSPTHCGRSP 85
            ++  SQWF+    +A ++       +     +Y +H+VVADE FF TLL+HSP C  H N NFL+  F    N+E         C+      CGRSP
Sbjct:  186 IYTASQWFIASREFAKYIAEAVPGTIAHSLIEYMKHVVVADESFFGTLLRHSPFCRKHHNSNFLHLHFDRWENEEENAKRDERKCIFRDRERCGRSP 282          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1032.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A7S4JP54_9STRA8.420e-1643.30Protein xylosyltransferase n=2 Tax=Odontella aurit... [more]
A0A7S2UAF3_9STRA4.030e-1540.21Protein xylosyltransferase n=1 Tax=Attheya septent... [more]
A0A1Z5KH39_FISSO1.400e-1439.18Protein xylosyltransferase n=1 Tax=Fistulifera sol... [more]
B7FSV5_PHATC4.870e-1439.81Protein xylosyltransferase n=2 Tax=Phaeodactylum t... [more]
A0A7S3V934_9STRA5.520e-1439.39Protein xylosyltransferase (Fragment) n=1 Tax=Chae... [more]
A0A8J2SSV4_9STRA8.960e-1439.22Protein xylosyltransferase n=1 Tax=Pelagomonas cal... [more]
A0A1Z5KSA0_FISSO1.690e-1338.14Protein xylosyltransferase n=1 Tax=Fistulifera sol... [more]
A0A7S2L4F4_9STRA1.070e-1237.76Protein xylosyltransferase (Fragment) n=1 Tax=Skel... [more]
B8LEP4_THAPS1.490e-1033.33Protein xylosyltransferase (Fragment) n=1 Tax=Thal... [more]
A0A7S4RM73_9STRA2.030e-1036.08Protein xylosyltransferase (Fragment) n=1 Tax=Dity... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003406Glycosyl transferase, family 14PFAMPF02485Branchcoord: 3..72
e-value: 4.1E-9
score: 36.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1032contigC-australica_Contig_1032:4597..5042 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1032.3.1mRNA_C-australica_Contig_1032.3.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1032 4597..5042 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1032.3.1 ID=prot_C-australica_Contig_1032.3.1|Name=mRNA_C-australica_Contig_1032.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=93bp
LHVGSQWFVIPPSYAAWLLNDTALVPHFTQYAQHIVVADEVFFSTLLKHS
PHCHDHVNENFLYASFSSNKEHCLMPSPTHCGRSPKASPGDQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003406Glyco_trans_14