prot_C-australica_Contig_10237.1.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_10237.1.1
Unique Nameprot_C-australica_Contig_10237.1.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length198
Homology
BLAST of mRNA_C-australica_Contig_10237.1.1 vs. uniprot
Match: A3UD34_9PROT (Peptide chain release factor 2 n=4 Tax=Oceanicaulis TaxID=153232 RepID=A3UD34_9PROT)

HSP 1 Score: 387 bits (993), Expect = 5.170e-134
Identity = 193/197 (97.97%), Postives = 196/197 (99.49%), Query Frame = 0
Query:    1 LKSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIEDKDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRSNAWTMLRARLYELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDDFMGAALAQRVGKSDED 197
            LKSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIEDKDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNR+NAWTMLRARLYELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDDFM AALAQRVGK++ED
Sbjct:  120 LKSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIEDKDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRANAWTMLRARLYELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDDFMAAALAQRVGKTEED 316          
BLAST of mRNA_C-australica_Contig_10237.1.1 vs. uniprot
Match: UPI0012E9E74E (peptide chain release factor 2 n=1 Tax=Woodsholea maritima TaxID=240237 RepID=UPI0012E9E74E)

HSP 1 Score: 358 bits (918), Expect = 8.270e-122
Identity = 177/197 (89.85%), Postives = 186/197 (94.42%), Query Frame = 0
Query:    1 LKSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIEDKDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRSNAWTMLRARLYELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDDFMGAALAQRVGKSDED 197
            LKS T+L+KGENAYGWLKTEAGVHRLVRISP+DSSGRRHTSFASVW YPLVDDTIEIEIE+KDVRVDTYRASGAGGQHINKTDSA+RLTH PTGIVV CQ DRSQHKNR+ AW MLRARLYELELQKREEAAQA AESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLD FM AAL+QRVG ++ED
Sbjct:  174 LKSATLLIKGENAYGWLKTEAGVHRLVRISPFDSSGRRHTSFASVWAYPLVDDTIEIEIEEKDVRVDTYRASGAGGQHINKTDSAIRLTHIPTGIVVQCQNDRSQHKNRATAWNMLRARLYELELQKREEAAQAQAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDAFMAAALSQRVGANNED 370          
BLAST of mRNA_C-australica_Contig_10237.1.1 vs. uniprot
Match: A0A550KK25_9PROT (Peptide chain release factor 2 n=1 Tax=Glycocaulis profundi TaxID=2518983 RepID=A0A550KK25_9PROT)

HSP 1 Score: 353 bits (907), Expect = 4.140e-120
Identity = 173/192 (90.10%), Postives = 181/192 (94.27%), Query Frame = 0
Query:    1 LKSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIEDKDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRSNAWTMLRARLYELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDDFMGAALAQRVG 192
            +KS+T+L+KGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVW YPLVDDTI IEI DKDVR DT+RASGAGGQH+NKTDSAVRLTHEPTGIVVACQ DRSQHKNR  AW MLRARLYELELQKREEAAQA+A+SKTDIGWGHQIRSYVLQPYQMVKDLRT VETSDTQGVLDGDLDDFM AALA RVG
Sbjct:  174 IKSVTLLIKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWAYPLVDDTINIEILDKDVRTDTFRASGAGGQHVNKTDSAVRLTHEPTGIVVACQADRSQHKNRDRAWEMLRARLYELELQKREEAAQAEADSKTDIGWGHQIRSYVLQPYQMVKDLRTSVETSDTQGVLDGDLDDFMAAALAARVG 365          
BLAST of mRNA_C-australica_Contig_10237.1.1 vs. uniprot
Match: A0A5M6ZK06_9PROT (Peptide chain release factor 2 n=1 Tax=Alkalicaulis satelles TaxID=2609175 RepID=A0A5M6ZK06_9PROT)

HSP 1 Score: 350 bits (898), Expect = 9.640e-119
Identity = 172/192 (89.58%), Postives = 182/192 (94.79%), Query Frame = 0
Query:    1 LKSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIEDKDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRSNAWTMLRARLYELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDDFMGAALAQRVG 192
            LKS+T+LVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVW YPLVDDTIEIEI++KDVR DTYRASGAGGQH+NKTDSAVRLTH P+GIVVACQ++RSQHKNRS AWTMLRARLYE ELQ+RE  AQA A+SKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDDFM AALA RVG
Sbjct:  174 LKSVTLLVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWAYPLVDDTIEIEIQEKDVRTDTYRASGAGGQHVNKTDSAVRLTHIPSGIVVACQSERSQHKNRSQAWTMLRARLYEQELQRREAEAQAQADSKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDDFMAAALAARVG 365          
BLAST of mRNA_C-australica_Contig_10237.1.1 vs. uniprot
Match: UPI001EDDE410 (peptide chain release factor 2 n=1 Tax=Shewanella sp. ER-Te-42B-Light TaxID=2872342 RepID=UPI001EDDE410)

HSP 1 Score: 344 bits (882), Expect = 1.800e-116
Identity = 170/195 (87.18%), Postives = 181/195 (92.82%), Query Frame = 0
Query:    1 LKSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIEDKDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRSNAWTMLRARLYELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDDFMGAALAQRVGKSD 195
            +KS+T+LVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVW+YPLVDDTI IEI DKDVR DTYRASG+GGQHINKTDSAVRLTH PTGI VACQ++RSQHKNR+ AW MLRARLYE ELQKRE AAQA+A+SK+DIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLD FM AALA RVG  D
Sbjct:  163 IKSVTLLVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWSYPLVDDTINIEILDKDVRTDTYRASGSGGQHINKTDSAVRLTHIPTGIAVACQSERSQHKNRAKAWDMLRARLYEQELQKREAAAQAEADSKSDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDPFMAAALAARVGVED 357          
BLAST of mRNA_C-australica_Contig_10237.1.1 vs. uniprot
Match: A0A4S2HER6_9PROT (Peptide chain release factor 2 n=1 Tax=Marinicauda pacifica TaxID=1133559 RepID=A0A4S2HER6_9PROT)

HSP 1 Score: 339 bits (869), Expect = 2.290e-114
Identity = 165/196 (84.18%), Postives = 179/196 (91.33%), Query Frame = 0
Query:    1 LKSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIEDKDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRSNAWTMLRARLYELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDDFMGAALAQRVGKSDE 196
            LKS+T+ VKGENAYGWLK EAG+HRLVRISP+DSSGRRHTSFASVW YP +D+ IEIEI +KDVR DT+RASGAGGQHINKTDSA+RLTH P+GIVV CQ DRSQHKNR+ AW MLRARLYELELQKREEAAQA+A+SKT+IGWGHQIRSYVLQPYQMVKDLRT VETSDTQGVLDGDLDDFM AALA RVG  DE
Sbjct:  174 LKSVTLHVKGENAYGWLKNEAGIHRLVRISPFDSSGRRHTSFASVWVYPEIDENIEIEIAEKDVRTDTFRASGAGGQHINKTDSAIRLTHVPSGIVVQCQADRSQHKNRATAWNMLRARLYELELQKREEAAQAEADSKTEIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDDFMAAALAARVGVEDE 369          
BLAST of mRNA_C-australica_Contig_10237.1.1 vs. uniprot
Match: A0A0P7VLX5_9PROT (Peptide chain release factor 2 n=5 Tax=Maricaulaceae TaxID=2800061 RepID=A0A0P7VLX5_9PROT)

HSP 1 Score: 336 bits (861), Expect = 6.650e-114
Identity = 163/192 (84.90%), Postives = 176/192 (91.67%), Query Frame = 0
Query:    1 LKSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIEDKDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRSNAWTMLRARLYELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDDFMGAALAQRVG 192
            LKS T+L+KG+NAYGWLKTEAGVHRLVRISP+D SGRRHTSFASVW YPL+DDTI+IEI DKDVR DT+RASGAGGQH+NKTDSAVRLTHEPTGIVV CQ DRSQH+NR  AW MLRARLYELELQ RE AAQA+A++KTDIGWGHQIRSYVLQPYQMVKDLRT VETSDTQGVLDGDLD FM A+LA RVG
Sbjct:  120 LKSATLLIKGDNAYGWLKTEAGVHRLVRISPFDGSGRRHTSFASVWVYPLIDDTIDIEILDKDVRTDTFRASGAGGQHVNKTDSAVRLTHEPTGIVVQCQADRSQHRNRDMAWNMLRARLYELELQNREAAAQAEADAKTDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDAFMAASLAARVG 311          
BLAST of mRNA_C-australica_Contig_10237.1.1 vs. uniprot
Match: A0A4V3RYB7_9PROT (Peptide chain release factor 2 n=1 Tax=Marinicauda algicola TaxID=2029849 RepID=A0A4V3RYB7_9PROT)

HSP 1 Score: 336 bits (862), Expect = 2.730e-113
Identity = 163/196 (83.16%), Postives = 178/196 (90.82%), Query Frame = 0
Query:    1 LKSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIEDKDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRSNAWTMLRARLYELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDDFMGAALAQRVGKSDE 196
            LKS T+ VKGENAYGWLKTEAG+HRLVRISP+DSSGRRHTSFASVW YP +D+ IEIEI +KDVR DT+RASGAGGQH+NKTDSA+RLTH PTGIVV CQ DRSQHKNR+ AW MLRARLYE+ELQKREEAAQA A++KTDIGWGHQIRSYVLQPYQMVKDLRT VETSDTQGVLDGDLD+FM AALA RVG  +E
Sbjct:  174 LKSATLHVKGENAYGWLKTEAGIHRLVRISPFDSSGRRHTSFASVWVYPEIDENIEIEINEKDVRTDTFRASGAGGQHVNKTDSAIRLTHIPTGIVVQCQADRSQHKNRATAWNMLRARLYEMELQKREEAAQAQADAKTDIGWGHQIRSYVLQPYQMVKDLRTNVETSDTQGVLDGDLDEFMAAALAARVGGEEE 369          
BLAST of mRNA_C-australica_Contig_10237.1.1 vs. uniprot
Match: A0A2D8BQD6_9PROT (Peptide chain release factor 2 n=4 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2D8BQD6_9PROT)

HSP 1 Score: 335 bits (860), Expect = 5.860e-113
Identity = 161/192 (83.85%), Postives = 178/192 (92.71%), Query Frame = 0
Query:    1 LKSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIEDKDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRSNAWTMLRARLYELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDDFMGAALAQRVG 192
            +KS+T+L KGENAYGWLKTEAGVHRLVRISPYDS+ RRHTSFAS W YPLVDD IE+E+ + DVRVDT+RASGAGGQH+NKT+SAVRLTHEPTGIVVACQ DRSQHKNR+ AW MLRAR+YELEL+KREEAAQA+A+SKTDIGWGHQIRSYVLQPYQMVKDLRT VETSDTQGVLDGDLD FM A+LA R+G
Sbjct:  174 IKSVTLLFKGENAYGWLKTEAGVHRLVRISPYDSAARRHTSFASAWPYPLVDDQIEVEVNESDVRVDTFRASGAGGQHVNKTESAVRLTHEPTGIVVACQADRSQHKNRATAWNMLRARIYELELRKREEAAQAEADSKTDIGWGHQIRSYVLQPYQMVKDLRTGVETSDTQGVLDGDLDAFMAASLAARLG 365          
BLAST of mRNA_C-australica_Contig_10237.1.1 vs. uniprot
Match: A0A8J3CRR7_9PROT (Peptide chain release factor 2 n=2 Tax=Algimonas arctica TaxID=1479486 RepID=A0A8J3CRR7_9PROT)

HSP 1 Score: 326 bits (836), Expect = 4.060e-110
Identity = 158/196 (80.61%), Postives = 175/196 (89.29%), Query Frame = 0
Query:    1 LKSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPLVDDTIEIEIEDKDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQTDRSQHKNRSNAWTMLRARLYELELQKREEAAQADAESKTDIGWGHQIRSYVLQPYQMVKDLRTQVETSDTQGVLDGDLDDFMGAALAQRVGKSDE 196
            +KS+T+  KG NA+GW+KTE+GVHRLVRISPYDSS RRHTSFASVW YP +DDTIEIEI + D RVDTYRASGAGGQHINKTDSAVR+THEPTGIVV CQ DRSQHKNRS AW MLRARLYE ELQ+REEAAQA+A+SK+DIGWGHQIRSYVLQPYQMVKDLRT VETSDT GVLDG LD+FM AAL+ RVG  ++
Sbjct:  120 IKSVTLRFKGPNAFGWMKTESGVHRLVRISPYDSSARRHTSFASVWVYPQIDDTIEIEINESDCRVDTYRASGAGGQHINKTDSAVRITHEPTGIVVQCQNDRSQHKNRSQAWDMLRARLYEKELQEREEAAQAEADSKSDIGWGHQIRSYVLQPYQMVKDLRTGVETSDTSGVLDGKLDEFMAAALSARVGDQED 315          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10237.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A3UD34_9PROT5.170e-13497.97Peptide chain release factor 2 n=4 Tax=Oceanicauli... [more]
UPI0012E9E74E8.270e-12289.85peptide chain release factor 2 n=1 Tax=Woodsholea ... [more]
A0A550KK25_9PROT4.140e-12090.10Peptide chain release factor 2 n=1 Tax=Glycocaulis... [more]
A0A5M6ZK06_9PROT9.640e-11989.58Peptide chain release factor 2 n=1 Tax=Alkalicauli... [more]
UPI001EDDE4101.800e-11687.18peptide chain release factor 2 n=1 Tax=Shewanella ... [more]
A0A4S2HER6_9PROT2.290e-11484.18Peptide chain release factor 2 n=1 Tax=Marinicauda... [more]
A0A0P7VLX5_9PROT6.650e-11484.90Peptide chain release factor 2 n=5 Tax=Maricaulace... [more]
A0A4V3RYB7_9PROT2.730e-11383.16Peptide chain release factor 2 n=1 Tax=Marinicauda... [more]
A0A2D8BQD6_9PROT5.860e-11383.85Peptide chain release factor 2 n=4 Tax=Alphaproteo... [more]
A0A8J3CRR7_9PROT4.060e-11080.61Peptide chain release factor 2 n=2 Tax=Algimonas a... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005139Peptide chain release factorPFAMPF03462PCRFcoord: 1..45
e-value: 4.2E-18
score: 65.9
NoneNo IPR availableGENE3D3.30.160.20coord: 51..146
e-value: 4.3E-75
score: 253.6
NoneNo IPR availableGENE3D3.30.70.1660coord: 1..183
e-value: 4.3E-75
score: 253.6
NoneNo IPR availablePANTHERPTHR43116PEPTIDE CHAIN RELEASE FACTOR 2coord: 2..195
NoneNo IPR availablePANTHERPTHR43116:SF3PEPTIDE CHAIN RELEASE FACTOR PRFB1, CHLOROPLASTIC-RELATEDcoord: 2..195
IPR000352Peptide chain release factor class IPFAMPF00472RF-1coord: 53..163
e-value: 2.1E-42
score: 143.7
IPR000352Peptide chain release factor class IPROSITEPS00745RF_PROK_Icoord: 70..86
IPR045853Peptide chain release factor class I superfamilySUPERFAMILY75620Release factorcoord: 1..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10237contigC-australica_Contig_10237:2..595 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10237.1.1mRNA_C-australica_Contig_10237.1.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_10237 2..595 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_10237.1.1 ID=prot_C-australica_Contig_10237.1.1|Name=mRNA_C-australica_Contig_10237.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=198bp
LKSITILVKGENAYGWLKTEAGVHRLVRISPYDSSGRRHTSFASVWTYPL
VDDTIEIEIEDKDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGIVVACQ
TDRSQHKNRSNAWTMLRARLYELELQKREEAAQADAESKTDIGWGHQIRS
YVLQPYQMVKDLRTQVETSDTQGVLDGDLDDFMGAALAQRVGKSDED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005139PCRF
IPR000352Pep_chain_release_fac_I
IPR045853Pep_chain_release_fac_I_sf