prot_C-australica_Contig_102.10.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-australica_Contig_102.10.1
Unique Name	prot_C-australica_Contig_102.10.1
Type	polypeptide
Organism	Chrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length	259

Homology

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BLAST of mRNA_C-australica_Contig_102.10.1 vs. uniprot
Match: A0A835Z1N4_9STRA (Nucleotide-diphospho-sugar transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1N4_9STRA)

HSP 1 Score: 130 bits (327), Expect = 2.530e-33
Identity = 80/210 (38.10%), Postives = 114/210 (54.29%), Query Frame = 0

Query:    1 MLKDTLIKLGTSPSLQKAGVELNLMFAPTSARGKAQGILGSLGLEDRWQVVPMYGEGTGGGAEGSDLTAVLRIALEGA-SLATSGGVVFIGMDCPELSVVEVEAALRISEEGGAYICPAWDGGYTLLALPSSTPGEVFEGVQWSHPHTCFSQMQAISRTGLSLYVSEVHHDIDEIEDVVDLEARLSQAAEGDGTCSCPFTLHAARRVLLA 209
            ML D L + G+S  L+   +   L++AP  AR +A  ++   G+E  W + P+ G   G   + +DLTA+L+ ALEG     T+G VVF+GMD P L   E+  A R   E  A +CPA DGGYTLL +P + P ++F+GV WS P TC +Q+  +   G+S+ +   + D+D  EDV       +  A       CP TL AA   L A
Sbjct:   38 MLLDLLRRFGSSAELRS--LRRVLVYAPPEARDEAAKLVREAGVEHEWVLTPVAG---GTKLKDADLTAILKDALEGTREEGTTGTVVFVGMDTPHLPSFEIIEACRKGAEDVALVCPANDGGYTLLGVPRNAPAKIFDGVLWSSPKTCETQVTRLRECGISVMIGATYEDLDTAEDVHSWHRTAT--ATSAAAHICPLTLEAAAAALRA 240

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BLAST of mRNA_C-australica_Contig_102.10.1 vs. uniprot
Match: A0A6H5KTC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC1_9PHAE)

HSP 1 Score: 124 bits (312), Expect = 6.830e-31
Identity = 80/185 (43.24%), Postives = 99/185 (53.51%), Query Frame = 0

Query:   25 MFAPTSARGKAQGILGSLGLEDRWQVVPMYGEGTGGGAEGSDLTAVLRIALEGA-SLATSGGVVFIGMDCPELSVVEVEAALRISEEGG-AYICPAWDGGYTLLALPSSTPGEVFEGVQWSHPHTCFSQMQAISRTGLSLYVSEVHHDIDEIEDVVDLEARLSQAAEGDGTCSCPFTLHAARRVL 207
            ++AP SA      +L  LGL+  W   P+    +G     S LT +L  AL  A S    G V+F+GMD PEL   EV AA   +E+ G AYICPA DGGYTLL LP       FEGV+WS   TC SQ  A++  G+S      +HD+DE +DV  LE R  +  EG     CP TL  AR  L
Sbjct:   74 VYAPPSAGPSVNKMLKDLGLDKAWDAEPVS---SGTPLRESGLTTILEAALASARSRERDGAVIFVGMDTPELPWSEVVAARSSAEKDGKAYICPASDGGYTLLGLPPKAGRGTFEGVKWSDSLTCKSQTLALASRGVSTRTGGTYHDVDEADDVAGLEKRSPRGLEGS---PCPQTLGIARTAL 252

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BLAST of mRNA_C-australica_Contig_102.10.1 vs. uniprot
Match: A0A7S2CAW3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CAW3_9STRA)

HSP 1 Score: 123 bits (309), Expect = 1.530e-29
Identity = 80/201 (39.80%), Postives = 107/201 (53.23%), Query Frame = 0

Query:    1 MLKDTLIKLGTSPSLQKAGVELNLMFAPTSARGKAQGILGSLGLEDR-WQVVPMYGEGTGGGAEGSDLTAVLRIALEGASLATS---------------GGVVFIGMDCPELSVVEVEAALRISEE-GGAYICPAWDGGYTLLALPSSTPGEVFEGVQWSHPHTCFSQMQAISRTGLSLYVSEVHHDIDEIEDVVDLEARL 184
            ++ D L  +GT+P L KA  ++ L+FAP S+R   Q +L  LGL+   W ++P+     G     SDL   L   L+ A    S               G  +FIGMD PE+S +++  AL  +   G AYICPA DGGYTLLALP   P  VF GV+WS   TC SQM  I+  G+ + V   + DID+I D+  L  RL
Sbjct:   87 LVSDALYSVGTAPEL-KAATKV-LLFAPESSRSDFQRLLQDLGLDAATWVLIPIQ---QGDDLRSSDLGGKLAFGLKDARAVPSASFGGDGKMVAGLSRGAALFIGMDAPEVSPLQIAQALATARSRGSAYICPATDGGYTLLALPPGAPDTVFSGVRWSADDTCLSQMSQIASKGIPVLVGPTYDDIDDIHDLRGLSQRL 282

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BLAST of mRNA_C-australica_Contig_102.10.1 vs. uniprot
Match: R1D0W7_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1D0W7_EMIHU)

HSP 1 Score: 112 bits (280), Expect = 6.450e-26
Identity = 79/201 (39.30%), Postives = 107/201 (53.23%), Query Frame = 0

Query:    4 DTLIKLGTSPSLQKAGVELNLMFAPTS--ARGKAQGILGSLGLEDRWQVVPMYGEGTGGGAEGSDLTAVLRIALEGASLATS-GGVVFIGMDCPELSVVEVEAALRISEEGG-AYICPAWDGGYTLLALPSSTPGEV-FEGVQWSHPHTCFSQMQAISRTGLSLYVSEVHHDIDEIEDVVDLEARLSQAAEGDGTCSCPFT 199
            D L +   + + Q  G E  L +AP +  AR     +L    +EDRW++ P+    +   A  S L  +L  A + A  A     V F+G+DCP+L +  + AA   S   G A +CPA DGGYTLLALP      + F  V+WS   TC SQ+QA++R GL+  V E H D+DE+ D+  L ARL  A E D T  CP T
Sbjct:   82 DLLQRFAAATASQGGGFECFLTYAPPTEEARSWFASLLQEGRVEDRWRLQPVLSSSS---AASSSLGDILCDAGQRARAARGCARVSFLGVDCPDLPLEALLAAASASSAPGVAAVCPASDGGYTLLALPEGADERLCFSDVRWSAGDTCLSQLQALTRAGLTSAVLETHSDVDELPDLRALWARL--AGEPDSTSQCPHT 277

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BLAST of mRNA_C-australica_Contig_102.10.1 vs. uniprot
Match: K0S136_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S136_THAOC)

HSP 1 Score: 94.7 bits (234), Expect = 2.410e-19
Identity = 73/218 (33.49%), Postives = 105/218 (48.17%), Query Frame = 0

Query:    1 MLKDTLIKLGTSPSLQKAGVELNLMFAP--TSARGKAQGILGSLGLED--------------RWQVVPMYGEGTGGGAEGSDLTA------VLRIALEGASLATSGGVVFIGMDCPELSVVEVEAALRISEEGG---AYICPAWDGGYTLLALPSSTPGEVFEGVQWSHPHTCFSQMQAISRTGLSLYVSEVHHDIDEIEDVVDLEARLSQAAEGDGT 193
            ML D L  L     LQ   ++L L++AP  ++   +   IL SLGL                 W ++PM        ++ SDLT+      ++        L     V+F+GMD PE+   E+   L  +       AY+CPA DGGY LLALPS  P  VF G++WS   T  SQ++A+S +G+ + +  + +DIDE EDV  L  RLS     + T
Sbjct:   39 MLSDVLSSLTACDHLQDT-LKL-LVYAPGDSNTGSRMTKILASLGLSSCSSESYTPRKDTTSNWVLMPML-------SDSSDLTSSSLGDKLMDSLTRARELDEGSPVLFLGMDSPEVPTDEIVRGLETASSKDMPRAYMCPANDGGYGLLALPSCAPTSVFSGIRWSCALTAVSQLKALSDSGIDVSIGRLMYDIDEPEDVSSLAKRLSSPFSEEAT 247

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BLAST of mRNA_C-australica_Contig_102.10.1 vs. uniprot
Match: A0A7S4QW63_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QW63_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 8.610e-19
Identity = 77/220 (35.00%), Postives = 112/220 (50.91%), Query Frame = 0

Query:    1 MLKDTLIKLGTSPSLQKAGVELNLMFAPTSARGKAQ--GILGSLGLE------------------DRWQVVPMYGEGTGGGAEGSDLTAVL-----RIALEGASLATS----GGVVFIGMDCPELSVVEVEAALRISEEGGAYICPAWDGGYTLLALPSSTP-GEVFEGVQWSHPHTCFSQMQAISRTGLSLYVSEVHHDIDEIEDVVDLEARLSQAAEG 190
            ML D L+ L +S       V   L++AP +  G+A    IL  LGL                    RW ++PM  + +    + SDL   L     R+    + L++S    G VVF+GMD PEL + E+  AL+IS +  A++CPA DGGY +L +PS  P   +FE VQWS   T  SQ++A++  G+ + + ++  DIDE+EDV  L  RL     G
Sbjct:   39 MLSDILVTLLSSFPENVLKV---LLYAPGNEEGEAHMVDILKDLGLPYTTXXXXXXXXXXXXDVYQRWILLPMVNDTS---LQSSDLGGKLSNGLNRVRTLQSKLSSSSNENGDVVFLGMDSPELPLHEISHALQISSQK-AHLCPANDGGYGMLCVPSHAPCPTIFEHVQWSTHLTAVSQLKALTDCGVEVSLGKLMFDIDEMEDVRGLAGRLCNVRNG 251

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BLAST of mRNA_C-australica_Contig_102.10.1 vs. uniprot
Match: A0A7S4QUD2_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QUD2_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 2.790e-18
Identity = 77/220 (35.00%), Postives = 112/220 (50.91%), Query Frame = 0

Query:    1 MLKDTLIKLGTSPSLQKAGVELNLMFAPTSARGKAQ--GILGSLGLE------------------DRWQVVPMYGEGTGGGAEGSDLTAVL-----RIALEGASLATS----GGVVFIGMDCPELSVVEVEAALRISEEGGAYICPAWDGGYTLLALPSSTP-GEVFEGVQWSHPHTCFSQMQAISRTGLSLYVSEVHHDIDEIEDVVDLEARLSQAAEG 190
            ML D L+ L +S       V   L++AP +  G+A    IL  LGL                    RW ++PM  + +    + SDL   L     R+    + L++S    G VVF+GMD PEL + E+  AL+IS +  A++CPA DGGY +L +PS  P   +FE VQWS   T  SQ++A++  G+ + + ++  DIDE+EDV  L  RL     G
Sbjct:   39 MLSDILVTLLSSFPENVLKV---LLYAPGNEEGEAHMVDILKDLGLPYTTXXXXXXXXXXXXDVYQRWILLPMVNDTS---LQSSDLGGKLSNGLNRVRTLQSKLSSSSNENGDVVFLGMDSPELPLHEISHALQISSQK-AHLCPANDGGYGMLCVPSHAPCPTIFEHVQWSTHLTAVSQLKALTDCGVEVSLGKLMFDIDEMEDVRGLAGRLCNVRNG 251

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BLAST of mRNA_C-australica_Contig_102.10.1 vs. uniprot
Match: A0A7S4N157_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4N157_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 5.430e-18
Identity = 43/84 (51.19%), Postives = 54/84 (64.29%), Query Frame = 0

Query:  111 GGAYICPAWDGGYTLLALPSSTPGEVFEGVQWSHPHTCFSQMQAISRTGLSLYVSEVHHDIDEIEDVVDLEARL--SQAAEGDG 192
            G AY+CPA DGGY +L LPS  P  VF GV+WSHP T  SQ++A+S  G+ L +    HD+DE  DV+DL  RL  S+   G G
Sbjct:    4 GRAYLCPADDGGYGMLCLPSDAPPSVFRGVRWSHPLTALSQLKALSDAGVGLTIGSEMHDVDEPSDVMDLAGRLCLSRRRRGKG 87

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BLAST of mRNA_C-australica_Contig_102.10.1 vs. uniprot
Match: A0A7S0BZN1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BZN1_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 1.200e-17
Identity = 46/127 (36.22%), Postives = 71/127 (55.91%), Query Frame = 0

Query:   87 VFIGMDCPELSVVEVEAALRISEEGGAY--------------------ICPAWDGGYTLLALPSSTPGEVFEGVQWSHPHTCFSQMQAISRTGLSLYVSE-VHHDIDEIEDVVDLEARLSQAAEGDG 192
            VFIG DCP L + E+E ++  ++   +Y                    ICPA DGGY LL+LPS+ P EVF+ V+WS  +TC SQ+ A+ + GL + V +  + DIDE+ED+  + + ++   +  G
Sbjct:   51 VFIGSDCPHLPMNEIENSICAADSASSYSKDVIGGNDNSESVSRNRSMICPAVDGGYVLLSLPSTCPLEVFDNVEWSTENTCTSQIAALKKAGLEVIVGDKAYRDIDELEDIQSIASTIASNDDSKG 177

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BLAST of mRNA_C-australica_Contig_102.10.1 vs. uniprot
Match: A0A8J6CB20_DIALT (Vesicle-fusing ATPase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CB20_DIALT)

HSP 1 Score: 87.8 bits (216), Expect = 5.290e-16
Identity = 55/158 (34.81%), Postives = 77/158 (48.73%), Query Frame = 0

Query:   45 EDRWQVVPMYGEGTGGGAEGSDLTAVLRIALEG--ASLATSGGVVFIGMDCPELSVVEVEAALRISEEGGAYICPAWDGGYTLLALPSSTPGEVFEGVQWSHPHTCFSQMQAISRTGLSLYVSEVHHDIDEIEDVVDLEARLSQAAEGDGTCSCPFTL 200
            E  W +VPM        A  S+LTAVL  AL    A  A     +FIG D P +    V AA+    +G A++CPA DGGYTLL +P+  P  +F GV+WS   T  SQ   ++  G+ + +     D+D+     DL  +L+        CS  + L
Sbjct:  115 EGDWTLVPMRSTD----ARSSNLTAVLMDALTRVRARFAPVSTTIFIGADAPTVGEDAVRAAIVAGLDGRAHLCPAEDGGYTLLGVPADAPASIFAGVRWSAATTAISQAARLAEAGVRVDIGATFVDVDDAASFEDLREKLAADDGQRALCSRVWAL 268

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_102.10.1 vs. uniprot

BLAST of mRNA_C-australica_Contig_102.10.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19


Match Name	E-value	Identity	Description
A0A835Z1N4_9STRA	2.530e-33	38.10	Nucleotide-diphospho-sugar transferase n=1 Tax=Tri...	[more]
A0A6H5KTC1_9PHAE	6.830e-31	43.24	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A7S2CAW3_9STRA	1.530e-29	39.80	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
R1D0W7_EMIHU	6.450e-26	39.30	Uncharacterized protein n=2 Tax=Emiliania huxleyi ...	[more]
K0S136_THAOC	2.410e-19	33.49	Uncharacterized protein n=1 Tax=Thalassiosira ocea...	[more]
A0A7S4QW63_9STRA	8.610e-19	35.00	Hypothetical protein (Fragment) n=1 Tax=Ditylum br...	[more]
A0A7S4QUD2_9STRA	2.790e-18	35.00	Hypothetical protein n=2 Tax=Ditylum brightwellii ...	[more]
A0A7S4N157_9STRA	5.430e-18	51.19	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A7S0BZN1_9STRA	1.200e-17	36.22	Hypothetical protein n=1 Tax=Proboscia inermis Tax...	[more]
A0A8J6CB20_DIALT	5.290e-16	34.81	Vesicle-fusing ATPase n=1 Tax=Diacronema lutheri T...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 210..230
IPR018641	Transferase 1, rSAM/selenodomain-associated	PFAM	PF09837	DUF2064	coord: 63..144 e-value: 2.7E-14 score: 53.1
IPR018641	Transferase 1, rSAM/selenodomain-associated	PANTHER	PTHR36529	SLL1095 PROTEIN	coord: 63..192
IPR029044	Nucleotide-diphospho-sugar transferases	GENE3D	3.90.550.10	Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A	coord: 1..201 e-value: 2.2E-28 score: 100.9
IPR029044	Nucleotide-diphospho-sugar transferases	SUPERFAMILY	53448	Nucleotide-diphospho-sugar transferases	coord: 63..185

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-australica_Contig_102	contig	C-australica_Contig_102:59301..61121 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Chrysoparadoxa australica CS_1217 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-australica_Contig_102.10.1	mRNA_C-australica_Contig_102.10.1	Chrysoparadoxa australica CS_1217	mRNA	C-australica_Contig_102 59012..61143 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-australica_Contig_102.10.1 ID=prot_C-australica_Contig_102.10.1|Name=mRNA_C-australica_Contig_102.10.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=259bp
MLKDTLIKLGTSPSLQKAGVELNLMFAPTSARGKAQGILGSLGLEDRWQV
VPMYGEGTGGGAEGSDLTAVLRIALEGASLATSGGVVFIGMDCPELSVVE
VEAALRISEEGGAYICPAWDGGYTLLALPSSTPGEVFEGVQWSHPHTCFS
QMQAISRTGLSLYVSEVHHDIDEIEDVVDLEARLSQAAEGDGTCSCPFTL
HAARRVLLATEEAEQSIQDQQQRLQLQEKDGQRRRLGRLLCWGLMVTVGL
TLGRARGR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018641	Trfase_1_rSAM/selenodom_assoc
IPR029044	Nucleotide-diphossugar_trans