prot_C-australica_Contig_989.4.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_989.4.1
Unique Nameprot_C-australica_Contig_989.4.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length105
Homology
BLAST of mRNA_C-australica_Contig_989.4.1 vs. uniprot
Match: A0A7S2CML5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CML5_9STRA)

HSP 1 Score: 164 bits (415), Expect = 1.720e-50
Identity = 75/102 (73.53%), Postives = 93/102 (91.18%), Query Frame = 0
Query:    1 MSVADAKKRENVLDLAKYLDRGVRVKFQGGREIHGLLKGYDQLVNLVLDECVEYIRDPADPYKLTDATRDIGLVVCRGTQVSLIAPVDGTEEIANPFLQEEE 102
            +++A A K+E++LDL KY+D+GVRVKFQGGRE+ G+LKGYDQLVNLVLDECVEY+RDP DPY++TD TR +G+VVCRGTQVSLI+P+DGTEEIANPF+  EE
Sbjct:   20 VAMAQASKKESILDLNKYVDQGVRVKFQGGREVQGILKGYDQLVNLVLDECVEYLRDPDDPYRITDDTRTLGMVVCRGTQVSLISPMDGTEEIANPFVAAEE 121          
BLAST of mRNA_C-australica_Contig_989.4.1 vs. uniprot
Match: A0A7S2ST35_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2ST35_9STRA)

HSP 1 Score: 162 bits (409), Expect = 7.130e-50
Identity = 73/95 (76.84%), Postives = 89/95 (93.68%), Query Frame = 0
Query:    8 KRENVLDLAKYLDRGVRVKFQGGREIHGLLKGYDQLVNLVLDECVEYIRDPADPYKLTDATRDIGLVVCRGTQVSLIAPVDGTEEIANPFLQEEE 102
            ++E++LDL KY+D+GVRVKFQGGRE+HG+LKGYDQLVNLVLDE VEY+RDP DPY++T+ TR +G+VVCRGTQVSLI+P+DGTEEIANPFLQ EE
Sbjct:    5 RKESILDLGKYIDQGVRVKFQGGREVHGVLKGYDQLVNLVLDEAVEYLRDPEDPYRITEQTRTLGMVVCRGTQVSLISPMDGTEEIANPFLQVEE 99          
BLAST of mRNA_C-australica_Contig_989.4.1 vs. uniprot
Match: A0A836C8L6_9STRA (Sm-like protein LSm7 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8L6_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.010e-49
Identity = 75/95 (78.95%), Postives = 88/95 (92.63%), Query Frame = 0
Query:    7 KKRENVLDLAKYLDRGVRVKFQGGREIHGLLKGYDQLVNLVLDECVEYIRDPADPYKLTDATRDIGLVVCRGTQVSLIAPVDGTEEIANPFLQEE 101
            +K+ENVLDL KYLD+GVRVKFQGGRE+ G+LKGYDQLVNLVLD+CVE+IRDP+DPY++TD TR +GLVVCRGTQVSLI+P+DG EEIANPFL  E
Sbjct:    4 RKKENVLDLTKYLDQGVRVKFQGGREVSGVLKGYDQLVNLVLDDCVEFIRDPSDPYRVTDETRTLGLVVCRGTQVSLISPMDGMEEIANPFLAAE 98          
BLAST of mRNA_C-australica_Contig_989.4.1 vs. uniprot
Match: A0A7S2XWT1_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWT1_9STRA)

HSP 1 Score: 159 bits (402), Expect = 9.420e-49
Identity = 76/100 (76.00%), Postives = 89/100 (89.00%), Query Frame = 0
Query:    3 VADAKKRENVLDLAKYLDRGVRVKFQGGREIHGLLKGYDQLVNLVLDECVEYIRDPADPYKLTDATRDIGLVVCRGTQVSLIAPVDGTEEIANPFLQEEE 102
            +A   KRENVLDL KY+D+GVRVKFQGGRE+HG+LKG+DQLVNLVLDE VE++RDP DPY++T+ TR +GLVVCRG QVSLI+PVDG EEIANPFLQ EE
Sbjct:    1 MATGGKRENVLDLNKYVDQGVRVKFQGGREVHGILKGFDQLVNLVLDETVEFLRDPDDPYRITNETRTLGLVVCRGPQVSLISPVDGMEEIANPFLQMEE 100          
BLAST of mRNA_C-australica_Contig_989.4.1 vs. uniprot
Match: D8LPU6_ECTSI (Sm-like protein LSm7 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPU6_ECTSI)

HSP 1 Score: 154 bits (390), Expect = 6.170e-47
Identity = 72/101 (71.29%), Postives = 86/101 (85.15%), Query Frame = 0
Query:    1 MSVADAKKRENVLDLAKYLDRGVRVKFQGGREIHGLLKGYDQLVNLVLDECVEYIRDPADPYKLTDATRDIGLVVCRGTQVSLIAPVDGTEEIANPFLQEE 101
            M+    K+RE VLDL KYLD+GVRVK QGGRE+HG+LKG+D LVN+VLDEC+E+IRDP DPYKLT+ TR++GLVVCRGTQVSLI+P DG EEI NPF+  E
Sbjct:    1 MAEVKKKERETVLDLQKYLDQGVRVKLQGGREVHGVLKGFDPLVNVVLDECIEFIRDPTDPYKLTEETRELGLVVCRGTQVSLISPRDGMEEIENPFMAPE 101          
BLAST of mRNA_C-australica_Contig_989.4.1 vs. uniprot
Match: K3WSH5_GLOUD (Sm domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSH5_GLOUD)

HSP 1 Score: 152 bits (384), Expect = 6.480e-46
Identity = 69/99 (69.70%), Postives = 86/99 (86.87%), Query Frame = 0
Query:    4 ADAKKRENVLDLAKYLDRGVRVKFQGGREIHGLLKGYDQLVNLVLDECVEYIRDPADPYKLTDATRDIGLVVCRGTQVSLIAPVDGTEEIANPFLQEEE 102
            + A +++ +LDL KY+D+ VRVKF GGRE+HG LKGYDQLVNLVLD+CVE++RDP D Y+LT+ TR++GLVVCRGT V LI+PVDGTEEI NPFLQ+EE
Sbjct:   12 SSAPRKDPILDLGKYIDQPVRVKFHGGREVHGFLKGYDQLVNLVLDDCVEFLRDPNDEYRLTEETRNVGLVVCRGTSVMLISPVDGTEEIPNPFLQQEE 110          
BLAST of mRNA_C-australica_Contig_989.4.1 vs. uniprot
Match: A0A7S2BSU7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BSU7_9STRA)

HSP 1 Score: 150 bits (380), Expect = 2.890e-45
Identity = 66/95 (69.47%), Postives = 86/95 (90.53%), Query Frame = 0
Query:    8 KRENVLDLAKYLDRGVRVKFQGGREIHGLLKGYDQLVNLVLDECVEYIRDPADPYKLTDATRDIGLVVCRGTQVSLIAPVDGTEEIANPFLQEEE 102
            K+E++LD+ KY+D+GVRVKFQGGRE+ G LKG+DQLVNLVLD+C E++RDP DPY++TD +R +G+VVCRGTQVSLI+PVDGTEEI+NPF+ + E
Sbjct:   17 KKESILDINKYIDQGVRVKFQGGREVTGTLKGFDQLVNLVLDDCTEFLRDPEDPYRITDESRTLGMVVCRGTQVSLISPVDGTEEISNPFIAQTE 111          
BLAST of mRNA_C-australica_Contig_989.4.1 vs. uniprot
Match: A0A8K1CTC3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTC3_PYTOL)

HSP 1 Score: 150 bits (380), Expect = 4.460e-45
Identity = 69/95 (72.63%), Postives = 84/95 (88.42%), Query Frame = 0
Query:    8 KRENVLDLAKYLDRGVRVKFQGGREIHGLLKGYDQLVNLVLDECVEYIRDPADPYKLTDATRDIGLVVCRGTQVSLIAPVDGTEEIANPFLQEEE 102
            +R+ +LDLAKY+D+ VRVKF GGRE+HG LKGYDQLVNLVLD+CVEY+RDP+D  ++TD TR +GLVVCRGT V+LI+PVDGTEEI NPFL +EE
Sbjct:   33 RRDQILDLAKYIDQPVRVKFFGGREVHGFLKGYDQLVNLVLDDCVEYLRDPSDASRVTDETRKVGLVVCRGTSVTLISPVDGTEEIPNPFLPQEE 127          
BLAST of mRNA_C-australica_Contig_989.4.1 vs. uniprot
Match: A0A4D9CX90_9STRA (Sm domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CX90_9STRA)

HSP 1 Score: 147 bits (371), Expect = 5.320e-44
Identity = 68/100 (68.00%), Postives = 86/100 (86.00%), Query Frame = 0
Query:    3 VADAKKRENVLDLAKYLDRGVRVKFQGGREIHGLLKGYDQLVNLVLDECVEYIRDPADPYKLTDATRDIGLVVCRGTQVSLIAPVDGTEEIANPFLQEEE 102
            V  A K++ VLDL KYLD+ V V+FQGGRE+ G+L+G+DQL+NLVLDE  E +RDP DPY+LTD TR++GLV+CRGTQVSLI+PV+GTEEIANPF+Q E+
Sbjct:    4 VVQATKKDTVLDLNKYLDKAVCVRFQGGREVTGILRGFDQLINLVLDESKETLRDPLDPYRLTDETRELGLVICRGTQVSLISPVEGTEEIANPFIQAED 103          
BLAST of mRNA_C-australica_Contig_989.4.1 vs. uniprot
Match: F0WMT1_9STRA (U6 snRNAassociated Smlike protein putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WMT1_9STRA)

HSP 1 Score: 147 bits (372), Expect = 5.760e-44
Identity = 67/95 (70.53%), Postives = 83/95 (87.37%), Query Frame = 0
Query:    8 KRENVLDLAKYLDRGVRVKFQGGREIHGLLKGYDQLVNLVLDECVEYIRDPADPYKLTDATRDIGLVVCRGTQVSLIAPVDGTEEIANPFLQEEE 102
            ++EN+LDL KY+D  V VKF+GGR++HG LKGYDQLVNLVLDEC+E++R+  D Y+L+D TR IGLVVCRGT V LI+PVDGTEEIANPF+Q+EE
Sbjct:   25 RKENILDLDKYIDHSVCVKFRGGRQVHGTLKGYDQLVNLVLDECIEFLREDNDSYRLSDKTRSIGLVVCRGTTVMLISPVDGTEEIANPFIQQEE 119          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_989.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2CML5_9STRA1.720e-5073.53Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2ST35_9STRA7.130e-5076.84Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A836C8L6_9STRA1.010e-4978.95Sm-like protein LSm7 n=1 Tax=Tribonema minus TaxID... [more]
A0A7S2XWT1_9STRA9.420e-4976.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D8LPU6_ECTSI6.170e-4771.29Sm-like protein LSm7 n=2 Tax=Ectocarpus TaxID=2879... [more]
K3WSH5_GLOUD6.480e-4669.70Sm domain-containing protein n=1 Tax=Globisporangi... [more]
A0A7S2BSU7_9STRA2.890e-4569.47Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8K1CTC3_PYTOL4.460e-4572.63Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A4D9CX90_9STRA5.320e-4468.00Sm domain-containing protein n=1 Tax=Nannochlorops... [more]
F0WMT1_9STRA5.760e-4470.53U6 snRNAassociated Smlike protein putative n=1 Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001163LSM domain, eukaryotic/archaea-typeSMARTSM00651Sm3coord: 13..86
e-value: 2.7E-20
score: 83.4
IPR001163LSM domain, eukaryotic/archaea-typePFAMPF01423LSMcoord: 14..85
e-value: 1.3E-19
score: 69.7
NoneNo IPR availableGENE3D2.30.30.100coord: 2..96
e-value: 5.1E-32
score: 111.9
NoneNo IPR availablePIRSFPIRSF037188Lsm7coord: 2..102
e-value: 2.5E-45
score: 151.0
NoneNo IPR availablePANTHERPTHR10553:SF30BNAA06G33630D PROTEINcoord: 9..101
IPR044641Sm-like protein Lsm7/SmGPANTHERPTHR10553SMALL NUCLEAR RIBONUCLEOPROTEINcoord: 9..101
IPR017132Sm-like protein Lsm7CDDcd01729LSm7coord: 9..97
e-value: 3.65263E-57
score: 169.304
IPR010920LSM domain superfamilySUPERFAMILY50182Sm-like ribonucleoproteinscoord: 15..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_989contigC-australica_Contig_989:9644..10382 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_989.4.1mRNA_C-australica_Contig_989.4.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_989 9375..10593 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_989.4.1 ID=prot_C-australica_Contig_989.4.1|Name=mRNA_C-australica_Contig_989.4.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=105bp
MSVADAKKRENVLDLAKYLDRGVRVKFQGGREIHGLLKGYDQLVNLVLDE
CVEYIRDPADPYKLTDATRDIGLVVCRGTQVSLIAPVDGTEEIANPFLQE
EEGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001163LSM_dom_euk/arc
IPR044641Lsm7/SmG-like
IPR017132Lsm7
IPR010920LSM_dom_sf