prot_C-australica_Contig_985.3.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_985.3.1
Unique Nameprot_C-australica_Contig_985.3.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length214
Homology
BLAST of mRNA_C-australica_Contig_985.3.1 vs. uniprot
Match: D7FQA0_ECTSI (PPM-type phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQA0_ECTSI)

HSP 1 Score: 112 bits (281), Expect = 2.950e-26
Identity = 67/161 (41.61%), Postives = 91/161 (56.52%), Query Frame = 0
Query:    4 PGYRTIRHGEASIASKILGPEHPTNEDSFASVLDISEELLGEGSPADSIAPLSSFFVVSDGHAGNGVSRMVRDELPKAFALSESFNSLDMPVADSLAGALVGGLKELETKIWDQAARGDPDSSGACLVAVALRGSHLCVANLGDCQALLLPPNGAPVELTK 164
            PGY  +R    S AS  L PEHPTNED  A V D    +L + +P  +  PL+  F V DGH G+G S+ V + L      S  + S+D P  ++LA A+  G+  +E    D + R   D+SG C   VA+RGS LC AN+GDCQA+L+   GA V L++
Sbjct:   53 PGYPCVRSSTFSSASPFLCPEHPTNEDR-ALVFDDMVSVL-KLAPTGTRGPLACLFGVFDGHGGDGASKFVANHLHHLIGRSAFYESIDYPADEALASAVEEGVASVEQAYTDWSKRSG-DTSGCCACVVAIRGSVLCAANVGDCQAILITDKGAIVSLSR 210          
BLAST of mRNA_C-australica_Contig_985.3.1 vs. uniprot
Match: A0A836CMW2_9STRA (Phosphatase 2C-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW2_9STRA)

HSP 1 Score: 67.8 bits (164), Expect = 4.450e-10
Identity = 42/108 (38.89%), Postives = 60/108 (55.56%), Query Frame = 0
Query:   57 SFFVVSDGHAGNGVSRMVRDELPKAFALSESFNSLDMPVADSLAGALVGGLKELETKIWDQAARGDPDSSGACLVAVALRGSHLCVANLGDCQALL-LPPNGAPVELT 163
            S F V DGH G+  S+ + D L +    ++S+    + +   L GALV  LK  E K  D A + + D SGAC+V       H+CVAN+GDC A+L LP   + V+L+
Sbjct:    7 SCFAVFDGHGGSRCSQWLADNLEEDLRCADSWRQEGLTLPKRLKGALVQALKRAEYKYLDLAFK-ESDHSGACVVVGLYCEGHVCVANVGDCLAVLYLPGADSHVDLS 113          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_985.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FQA0_ECTSI2.950e-2641.61PPM-type phosphatase domain-containing protein n=2... [more]
A0A836CMW2_9STRA4.450e-1038.89Phosphatase 2C-like domain-containing protein n=1 ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001932PPM-type phosphatase domainPFAMPF00481PP2Ccoord: 53..164
e-value: 2.6E-12
score: 46.9
IPR001932PPM-type phosphatase domainPROSITEPS51746PPM_2coord: 13..213
score: 16.117527
IPR036457PPM-type phosphatase domain superfamilyGENE3D3.60.40.10coord: 8..172
e-value: 1.3E-22
score: 82.4
IPR036457PPM-type phosphatase domain superfamilySUPERFAMILY81606PP2C-likecoord: 20..164

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_985contigC-australica_Contig_985:7084..7784 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_985.3.1mRNA_C-australica_Contig_985.3.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_985 7083..7914 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_985.3.1 ID=prot_C-australica_Contig_985.3.1|Name=mRNA_C-australica_Contig_985.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=214bp
MKAPGYRTIRHGEASIASKILGPEHPTNEDSFASVLDISEELLGEGSPAD
SIAPLSSFFVVSDGHAGNGVSRMVRDELPKAFALSESFNSLDMPVADSLA
GALVGGLKELETKIWDQAARGDPDSSGACLVAVALRGSHLCVANLGDCQA
LLLPPNGAPVELTKVGEAQHISTSPSLSFPSHFRVFFPLALCLRYTGPMP
GRRRQEYARQAPR*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001932PPM-type_phosphatase_dom
IPR036457PPM-type_dom_sf