prot_C-australica_Contig_98.2.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_98.2.1
Unique Nameprot_C-australica_Contig_98.2.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length186
Homology
[Close]
BLAST of mRNA_C-australica_Contig_98.2.1 vs. uniprot
Match: A0A835YXZ0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXZ0_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.070e-5
Identity = 29/83 (34.94%), Postives = 45/83 (54.22%), Query Frame = 0 
Query:    5 SDRVLHEAVYALEDAARVCIQPELQRLTHF-HSMRVHEHAAPDGCRVIRIALLLRSRANIDSVLRSIGTGCFLCEILSDVHMD 86
            S++ L  A  +L+    V + PELQRL HF H+          G R +RI  +    A++D VLR +G GC L +I+ ++ +D
Sbjct:   37 SEQALQTATDSLDKVLTVFLVPELQRLPHFQHTEVTLSPPGAGGIRTVRIRAIFNKNAHLDDVLRRLGIGCRLADIIPELSID 119
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_98.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835YXZ0_9STRA1.070e-534.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_98contigC-australica_Contig_98:9982..11855 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_98.2.1mRNA_C-australica_Contig_98.2.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_98 9968..11855 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_98.2.1 ID=prot_C-australica_Contig_98.2.1|Name=mRNA_C-australica_Contig_98.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=186bp
MNETSDRVLHEAVYALEDAARVCIQPELQRLTHFHSMRVHEHAAPDGCRV
IRIALLLRSRANIDSVLRSIGTGCFLCEILSDVHMDFFCPLPLSDIFELR
KCVLDRKMSCSFEITVSYARDIIVKLLEEWVTLLEHSAYQPQVDSEEHNE
EREFHQHRTTDADILPGLQHPLKPPKYLQEFPYHR*
back to top