prot_C-australica_Contig_1002.2.4 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1002.2.4
Unique Nameprot_C-australica_Contig_1002.2.4
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length283
Homology
BLAST of mRNA_C-australica_Contig_1002.2.4 vs. uniprot
Match: D8LEW1_ECTSI (D27-like_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW1_ECTSI)

HSP 1 Score: 311 bits (796), Expect = 1.320e-102
Identity = 157/243 (64.61%), Postives = 186/243 (76.54%), Query Frame = 0
Query:   46 RPPLTVL-GRAGPTDAPPSYDAADSNPFNAALLGYFRSKLADECGGQSPT--EGYDGLMEMILALNSKFMSQVETQQASRRTLQALFPSWLPGAFAVMFSKPFPGFSNRLNAWVTWWASQWLMGPSELNNVEETNDGSSGKGQGLLVTRPPFDSCRFLEHSGCASVCLNNCKIPTEEFFAKDMGLLLEMKPDYEDFSCQFSFGKAPEPRESDQVFNVACFEQCPSQGSLRK-------KCHQI 278
            +PPL V+ GRAGPTDA P+YD  D+ P +  LLG FRSKLA+E GG       GYDGLM+MI  LN KF S+ +TQ+ASRR L++LFPSWLP +FAVMFSKPFP FS+RLNAWVT  ASQWLMGPS+LN++E  +DG+ G G GLLV R     CRFLE +GCASVC+N CK+PTEEFFAKDMGL LEM P+YEDFSCQFSF K P  R+ D+ F VACFEQCPS+G+LR+       +CHQI
Sbjct:   76 KPPLKVIRGRAGPTDATPTYD--DTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIE-IDDGTVGVGHGLLVER-----CRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQPNQPAVARCHQI 310          
BLAST of mRNA_C-australica_Contig_1002.2.4 vs. uniprot
Match: A0A835ZDY9_9STRA (D27-like_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDY9_9STRA)

HSP 1 Score: 254 bits (649), Expect = 7.060e-82
Identity = 126/205 (61.46%), Postives = 152/205 (74.15%), Query Frame = 0
Query:   76 LLGYFRSKLADECGGQSPTEGYDGLMEMILALNSK--FMSQVETQQASRRTLQALFPSWLPGAFAVMFSKPFPGFSNRLNAWVTWWASQWLMGPSELNNVEETNDGSSGKGQGLLVTRPPFDSCRFLEHSGCASVCLNNCKIPTEEFFAKDMGLLLEMKPDYEDFSCQFSFGKAPEPRESDQVFNVACFEQCPSQGSLRKKCHQI 278
            LLG FR KLA E        GY GL+EMI +LN    + +  +TQQA+R+ LQ+LFP WLPGAFAVMFSKPFP FS R+NAWVT  ASQWLMGPS++N+VE  + G  G G GLLV R     CR+LE +GCASVC+N CKIPT+EFF KDMGL L+M PDY+DFSCQFSFGK P   E D+VF VACFEQCP++ S ++ CH++
Sbjct:    2 LLGLFRKKLAAELQYDGSDPGYAGLIEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVE-IDGGQMGVGHGLLVKR-----CRYLEEAGCASVCVNTCKIPTQEFFMKDMGLPLQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNKASTKRLCHKV 200          
BLAST of mRNA_C-australica_Contig_1002.2.4 vs. uniprot
Match: A8IC34_CHLRE (Predicted protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IC34_CHLRE)

HSP 1 Score: 252 bits (643), Expect = 5.690e-80
Identity = 126/252 (50.00%), Postives = 159/252 (63.10%), Query Frame = 0
Query:   28 SAPRQARTRVVMSAEQ-PRRPPLTVLGRAGPTDAPPSYDAADSNPFNAALLGYFRSKLADECGGQSPTEGYDGLMEMILALNSKFMSQVETQQASRRTLQALFPSWLPGAFAVMFSKPFPGFSNRLNAWVTWWASQWLMGPSELNNVEETNDGSSGKGQGLLVTRPPFDSCRFLEHSGCASVCLNNCKIPTEEFFAKDMGLLLEMKPDYEDFSCQFSFGKAPEPRESDQVFNVACFEQCPSQGSLRKKCHQI 278
            SAP  +R+ +V      P  P    L +AGP DA P Y   DS P N  ++  FR K+ +  G  S   GYD ++++   LN+KF +  ETQ+A+R  L ALFPSWLPGAF VMFS+P P FS RLNA  T    QWLMGP ++N+VE  + G  G G G+LV R     CR+LE +GCASVC+N+CK+PT+ FF KDMGL L M P+Y+DFSCQFSFGK P+P + D  F   CF QCPS+ S    C  I
Sbjct:   23 SAPCSSRSTIVTRVSSAPGAPSPANLRQAGPVDAAPDYKPIDSQPLNIIVMALFRRKMVEALGSDSKLSGYDAIIDLTRKLNTKFRTAAETQEATRGILNALFPSWLPGAFKVMFSRPLPEFSCRLNALATAMTCQWLMGPCKVNDVE-IDGGKVGTGHGVLVER-----CRYLEQAGCASVCINSCKVPTQSFFEKDMGLPLTMTPNYDDFSCQFSFGKTPDPVDRDPAFATPCFTQCPSKRSRTPVCGGI 268          
BLAST of mRNA_C-australica_Contig_1002.2.4 vs. uniprot
Match: A0A8J4BT63_9CHLO (D27-like_C domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BT63_9CHLO)

HSP 1 Score: 247 bits (631), Expect = 2.450e-78
Identity = 121/214 (56.54%), Postives = 146/214 (68.22%), Query Frame = 0
Query:   55 AGPTDAPPSYDAADSNPFNAALLGYFRSKLADECGGQSPTEGYDGLMEMILALNSKFMSQVETQQASRRTLQALFPSWLPGAFAVMFSKPFPGFSNRLNAWVTWWASQWLMGPSELNNVEETNDGSSGKGQGLLVTRPPFDSCRFLEHSGCASVCLNNCKIPTEEFFAKDMGLLLEMKPDYEDFSCQFSFGKAPEPRESDQVFNVACFEQCPSQ 268
            AGPTD  PSY   DS P N  ++  FR K+    G  S   GYD ++++   LNSKF +  ETQ+A+R  L ALFPSWLPGAF VMFSKPFP FS RLNA  T    QWLMGP ++N+VE  + G  GKG G+LV R     CR+LE +GCASVC+N+CKIPT+ FF+KDMGL L M P+YEDFSCQF+FGK P   E D+ F   CF QCPS+
Sbjct:   42 AGPTDPAPSYRDIDSQPVNVVVMALFRRKMVAALGSDSELYGYDAIIDLTRRLNSKFRTGAETQEATRAILNALFPSWLPGAFKVMFSKPFPEFSCRLNALATALTCQWLMGPCKVNDVE-IDGGIVGKGHGVLVER-----CRYLEQAGCASVCINSCKIPTQTFFSKDMGLQLTMTPNYEDFSCQFAFGKTPMLAEMDEAFTTPCFRQCPSK 249          
BLAST of mRNA_C-australica_Contig_1002.2.4 vs. uniprot
Match: A0A7J7QQS2_9CHLO (D27-like_C domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QQS2_9CHLO)

HSP 1 Score: 243 bits (620), Expect = 4.410e-77
Identity = 112/222 (50.45%), Postives = 152/222 (68.47%), Query Frame = 0
Query:   54 RAGPTDAPPSYDAADSNPFNAALLGYFRSKLADECGGQSPTEGYDGLMEMILALNSKFMSQVETQQASRRTLQALFPSWLPGAFAVMFSKPFPGFSNRLNAWVTWWASQWLMGPSELNNVEETNDGSSGKGQGLLVTRPPFDSCRFLEHSGCASVCLNNCKIPTEEFFAKDMGLLLEMKPDYEDFSCQFSFGKAPEPRESDQVFNVACFEQCPSQGSLRKKC 275
            +AGP +  P Y A DS P N  ++  FR K+    G  S   GY+ ++++   LN+ +    + Q  +R+ L++LFPSWLPGAFAVMFSKP P FS +LNA  T    QWLMGP ++N+VE  +DGS G+G G+LV R     CR+LE +GCAS+C+N+CK+PT+EFF KDMGL L M P+YEDFSCQF+FGKAP P++ D+ F+  CF+QCPS+ +    C
Sbjct:    1 QAGPVEPVPDYTAIDSQPLNQVVMALFRRKMVAAIGSDSQLSGYEAIIDLTRRLNASYSEARQVQLTTRKILKSLFPSWLPGAFAVMFSKPLPEFSCKLNALATALTCQWLMGPCKVNDVE-LDDGSVGQGMGVLVER-----CRYLEQAGCASICINSCKVPTQEFFEKDMGLPLTMTPNYEDFSCQFTFGKAPLPQQLDEAFSTPCFQQCPSRAARYSDC 216          
BLAST of mRNA_C-australica_Contig_1002.2.4 vs. uniprot
Match: I0YX40_COCSC (D27-like_C domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YX40_COCSC)

HSP 1 Score: 243 bits (619), Expect = 5.490e-77
Identity = 118/217 (54.38%), Postives = 147/217 (67.74%), Query Frame = 0
Query:   52 LGRAGPTDAPPSYDAADSNPFNAALLGYFRSKLADECGGQSPTEGYDGLMEMILALNSKFMSQVETQQASRRTLQALFPSWLPGAFAVMFSKPFPGFSNRLNAWVTWWASQWLMGPSELNNVEETNDGSSGKGQGLLVTRPPFDSCRFLEHSGCASVCLNNCKIPTEEFFAKDMGLLLEMKPDYEDFSCQFSFGKAPEPRESDQVFNVACFEQCPSQ 268
              +AGP    PSY++ DS P N A++  FR K+    G  S  EGYD ++++   LNSK  +  +TQ  +R+ L +LFPSWLP AF VMFSKP P  S +LNAWVT    QWLMGP ++N+VE  + G  G GQG+LV R     CR+LE +GCASVCLN+CKIPT+EFFAKDMGL L M P+YEDFSCQFSFG  P+P   D+ F   CF QCPS+
Sbjct:    5 FSKAGPETPAPSYESIDSQPLNRAIMSLFRQKMVAAIGKNSDKEGYDAIVDLTRLLNSKSSNPRDTQVKTRQILLSLFPSWLPPAFKVMFSKPMPEVSCQLNAWVTMLTCQWLMGPCKVNDVE-LDGGRIGSGQGVLVER-----CRYLEETGCASVCLNSCKIPTQEFFAKDMGLPLTMTPNYEDFSCQFSFGLTPKPAAIDEAFATPCFSQCPSK 215          
BLAST of mRNA_C-australica_Contig_1002.2.4 vs. uniprot
Match: A0A0D2MYG1_9CHLO (D27-like_C domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MYG1_9CHLO)

HSP 1 Score: 241 bits (616), Expect = 1.030e-75
Identity = 120/255 (47.06%), Postives = 156/255 (61.18%), Query Frame = 0
Query:   28 SAPRQARTRVVMSAEQPRRPPLTVLGRAGPTDAP--------------PSYDAADSNPFNAALLGYFRSKLADECGGQSPTEGYDGLMEMILALNSKFMSQVETQQASRRTLQALFPSWLPGAFAVMFSKPFPGFSNRLNAWVTWWASQWLMGPSELNNVEETNDGSSGKGQGLLVTRPPFDSCRFLEHSGCASVCLNNCKIPTEEFFAKDMGLLLEMKPDYEDFSCQFSFGKAPEPRESDQVFNVACFEQCPSQ 268
            SAPR+           PRRP LT+   AGP D                PSY   D+ P N  ++  FR K+ +  G  S  +GY  ++++   LN ++ +  +TQ A+RR L +LFPSWLPGAF VMFS P P FS RLNA  T    QWLMGP ++N+VE  + G  G G G+LV R     CR+LE +GCAS+C+N+CK+PT+EFF KDMGL L M P+YEDFSCQF+FGK P P+  D+ F+  CF QCPS+
Sbjct:   24 SAPRRGAASSRPCPRAPRRPRLTLARAAGPLDGAAATQLRQAGPGTPAPSYAEIDAQPLNRVVMALFRRKMVESIGSDSQLQGYPAIIDLTRRLNRQYQTARDTQLATRRILNSLFPSWLPGAFKVMFSAPLPAFSCRLNALATALTCQWLMGPCKVNDVE-LDSGEVGSGMGVLVER-----CRYLEEAGCASICINSCKVPTQEFFEKDMGLPLTMTPNYEDFSCQFAFGKTPLPQSQDEAFSTPCFTQCPSK 272          
BLAST of mRNA_C-australica_Contig_1002.2.4 vs. uniprot
Match: A0A835YAW5_9CHLO (D27-like_C domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YAW5_9CHLO)

HSP 1 Score: 236 bits (601), Expect = 1.230e-73
Identity = 121/245 (49.39%), Postives = 162/245 (66.12%), Query Frame = 0
Query:   38 VMSAEQPRRPPLTVLGRAGPTDAP-PSYDAADSNPFNAALLGYFRSKLADECGGQSPTEGYDGLMEMILALNSKFMSQVETQQASRRTLQALFPSWLPGAFAVMFSKPFPGFSNRLNAWVTWWASQWLMGPSELNNVEETNDGSSGKGQGLLVTRPPFDSCRFLEHSGCASVCLNNCKIPTEEFFAKDMGLLLEMKPDYEDFSCQFSFGKAPEPRESDQVFNVACFEQCPSQ---GSLRKKCHQI 278
            + S E P  PP T   +AGP D P PSY+  D    N  ++  FR K+ D  G  S  +GY G++++   LN+K+ + V+TQ+A+R  L+ALFPSWL  AF ++F+KP P FS RLNA  T    QWLMGP ++N+VE  +DG+ GKGQG+ V R     CR+LE +GCASVC+N+CK+PT+ FFA+DMG+ L M P+Y+DFSCQFSFGKAP   + D  F  ACF QCPS+   G++   C  I
Sbjct:   37 ISSVEAPT-PPATR--QAGPADVPAPSYEEIDRKAMNVLVMSLFRRKMVDALGVDSQQQGYAGIVDLTRKLNNKYRNPVDTQEATRAILKALFPSWLLPAFRMLFAKPMPDFSCRLNAVATALTCQWLMGPCKVNDVE-FDDGTVGKGQGVFVER-----CRYLEETGCASVCINSCKVPTQTFFARDMGIPLTMTPNYDDFSCQFSFGKAPPSVKLDGAFTTACFNQCPSKKARGAVATACGGI 272          
BLAST of mRNA_C-australica_Contig_1002.2.4 vs. uniprot
Match: A0A2J8AIV6_9CHLO (D27-like_C domain-containing protein n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AIV6_9CHLO)

HSP 1 Score: 238 bits (608), Expect = 2.910e-73
Identity = 112/217 (51.61%), Postives = 151/217 (69.59%), Query Frame = 0
Query:   59 DAP-PSYDAADSNPFNAALLGYFRSKLADECGGQSPTEGYDGLMEMILALNSKFMSQVETQQASRRTLQALFPSWLPGAFAVMFSKPFPGFSNRLNAWVTWWASQWLMGPSELNNVEETNDGSSGKGQGLLVTRPPFDSCRFLEHSGCASVCLNNCKIPTEEFFAKDMGLLLEMKPDYEDFSCQFSFGKAPEPRESDQVFNVACFEQCPSQGSLRKK 274
            D+P PSY A D  P N  ++  FR K+    G  SP  GYD ++++   LN+KF +  ETQ+A+R  L ALFPSWLPGAF VMF++P P  S R+NA  T    QWLMGP ++N+VE T+DG+ G+G G+LV R     CR+LE +GCA+VC+N+CK+PT+ FFAKDMGL L M P+Y+DFSCQF+FGK P P  +D+ +  +CF QCPS+ + R +
Sbjct:  168 DSPTPSYAAIDVQPLNKIVMALFRRKMVAAVGSDSPLSGYDAIIDLTRRLNNKFRTAAETQEATRSILIALFPSWLPGAFKVMFARPLPELSCRMNALATALTCQWLMGPCKVNDVE-TDDGTVGEGHGVLVER-----CRYLEQAGCAAVCINSCKVPTQSFFAKDMGLALTMTPNYDDFSCQFAFGKTPLPVSADEAYTTSCFAQCPSKKARRNQ 378          
BLAST of mRNA_C-australica_Contig_1002.2.4 vs. uniprot
Match: A0A4D9DA54_9STRA (D27-like_C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA54_9STRA)

HSP 1 Score: 233 bits (595), Expect = 1.090e-72
Identity = 122/236 (51.69%), Postives = 156/236 (66.10%), Query Frame = 0
Query:   50 TVLGRAGPTDAPPSYDAADSNPFNAALLGYFRSKLADECGGQ-SPTEGYDGLMEMILALNSKFMS--QVETQQASRRTLQALFPSWLPGAFAVMFSKPFPGFSNRLNAWVTWWASQWLMGPSELNNVEETNDGSSGKGQGLLVTRPPFDSCRFLEHSGCASVCLNNCKIPTEEFFAKDMGLLLEMKPDYEDFSCQFSFGKAPEPRESDQVFNVACFEQCPSQ----GSLRKKCHQI 278
            T L R GP DAPP Y      PF+  L  +FR+KL  + GG  + ++ + GL+E+I  LN+ F +  +V TQ+A++  L++LFPSWLP AFAVMFSKPFP FS R+NA +T   + WLMG SE+ +V+ T  GS G GQGLLV R     CR+LE +GCAS+C+N CKIPT+ FF +DMGL L M PDY+DFSC F+FG  P P   D+   VACF QCP+     G L   CHQI
Sbjct:   53 TRLQRRGPIDAPPEY-GMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVTG-GSVGVGQGLLVKR-----CRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPEVDDEAMRVACFSQCPTAKAPTGEL-SNCHQI 280          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1002.2.4 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEW1_ECTSI1.320e-10264.61D27-like_C domain-containing protein n=1 Tax=Ectoc... [more]
A0A835ZDY9_9STRA7.060e-8261.46D27-like_C domain-containing protein n=1 Tax=Tribo... [more]
A8IC34_CHLRE5.690e-8050.00Predicted protein n=2 Tax=Chlamydomonas reinhardti... [more]
A0A8J4BT63_9CHLO2.450e-7856.54D27-like_C domain-containing protein n=2 Tax=Volvo... [more]
A0A7J7QQS2_9CHLO4.410e-7750.45D27-like_C domain-containing protein n=1 Tax=Scene... [more]
I0YX40_COCSC5.490e-7754.38D27-like_C domain-containing protein n=1 Tax=Cocco... [more]
A0A0D2MYG1_9CHLO1.030e-7547.06D27-like_C domain-containing protein n=1 Tax=Monor... [more]
A0A835YAW5_9CHLO1.230e-7349.39D27-like_C domain-containing protein n=1 Tax=Edaph... [more]
A0A2J8AIV6_9CHLO2.910e-7351.61D27-like_C domain-containing protein n=1 Tax=Tetra... [more]
A0A4D9DA54_9STRA1.090e-7251.69D27-like_C domain-containing protein n=1 Tax=Nanno... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025114Beta-carotene isomerase D27-like, C-terminalPFAMPF13225D27-like_Ccoord: 163..252
e-value: 8.4E-29
score: 99.4
NoneNo IPR availablePANTHERPTHR33591:SF2BETA-CAROTENE ISOMERASE D27coord: 67..275
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..16
score: 5.0
IPR038938Beta-carotene isomerase D27-likePANTHERPTHR33591BETA-CAROTENE ISOMERASE D27coord: 67..275

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1002contigC-australica_Contig_1002:2620..4286 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1002.2.4mRNA_C-australica_Contig_1002.2.4Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1002 2176..4360 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1002.2.4 ID=prot_C-australica_Contig_1002.2.4|Name=mRNA_C-australica_Contig_1002.2.4|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=283bp
MKVAALVGCAMFMQSCSAWVGLPGPHLSAPRQARTRVVMSAEQPRRPPLT
VLGRAGPTDAPPSYDAADSNPFNAALLGYFRSKLADECGGQSPTEGYDGL
MEMILALNSKFMSQVETQQASRRTLQALFPSWLPGAFAVMFSKPFPGFSN
RLNAWVTWWASQWLMGPSELNNVEETNDGSSGKGQGLLVTRPPFDSCRFL
EHSGCASVCLNNCKIPTEEFFAKDMGLLLEMKPDYEDFSCQFSFGKAPEP
RESDQVFNVACFEQCPSQGSLRKKCHQIVASK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR025114D27-like_C
IPR038938D27-like