prot_C-australica_Contig_995.1.3 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_995.1.3
Unique Nameprot_C-australica_Contig_995.1.3
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length462
Homology
BLAST of mRNA_C-australica_Contig_995.1.3 vs. uniprot
Match: A0A835ZAQ3_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ3_9STRA)

HSP 1 Score: 253 bits (647), Expect = 5.000e-75
Identity = 171/444 (38.51%), Postives = 245/444 (55.18%), Query Frame = 0
Query:    1 MFGDEAASGGVLEDEGVAVMEVDSSISMAGDKALSMGAKDVVVSCASSDVIVFNVLQQDLHRA--GALSELMPALEEALALSEDALEEGPKKKELIIVVRDFDGDSSEEAALAGSALATLEGMWESAARPEAATGAKLADYFTVQMEYLPHHTLASSAFSXXXXXXXXXXXXXSPQA-AAGVLERLQKMSALA-GPDVSAPSAKEMKAAAVGGKAVEQCFASYTNLVLGLSKAFP-GLDEEFGEHQDDIAEDVMAEFKDLCSGVGGS-----VVGKKRKELMSAMARDASARYAEQLALLKAAATGKFRQELANVRVGPGLGKEMSNALEVADKYFRSTAPALKCKLVQDSSQSERKALITDLREFADERLQLAKLQGATQSSNRLFSRPVALNFHWLLPKPFGTDARQSILSVDDKAAFASTNVRADAMFFEFAPTGEEIEGP 434
            MFG       ++ D+G+ ++E +SS S+A     +   +D   + A++DV V+NV  QDL R+    L+EL  ALE  LA S    E GPK   L+  VRDFDG+ + +  +  +    L+ MW+ A RP       L D   V   +LP H+LA+  ++             +  A AA VL+ LQ   A A G  V + S  E+ AA V   A  Q  A++ N V  LS +   GLD EFG H D I ++ + ++    +          V+GKKR EL +AM R+A   YA Q  LL+AAA  KFR+  A +R+ P LGK+M  A++ +D Y   +A  LK K +     +ER+ L +DLR  A ERLQLAKLQG + + +R   RPV +  HWLLP+PFGTDA +S+L   D+ AF+S  ++AD+++FEFAP  +E+ GP
Sbjct:   61 MFGPAVEQETLIADDGLVLLEAESSCSLASR---AKAVRDAAAALAAADVAVYNVFMQDLQRSVDATLTELQMALEPFLAASAGQPEGGPKP--LVFAVRDFDGEEASQEQVEAAMTEALQRMWQRAVRPGDFAKKSLEDVLDVSFSFLPSHSLAAGEYAHAAAALRTRLAEGAKSATAADVLKTLQAAPAQATGAPVESTSPAELAAALVAKTAAAQALATFKNRVSALSASLADGLDPEFGAHVDIIVDEALDQYSQGVAAXXXXXXXXXVIGKKRGELRAAMLREAHGLYAAQFRLLRAAAADKFRRSPATLRISPTLGKDMDAAMKESDSYMAESAKGLKSKYLPALLDAERRELGSDLRAVAAERLQLAKLQGMSAAKSR---RPVGIALHWLLPEPFGTDASRSVLGAGDEPAFSSERLKADSLWFEFAPL-DEVPGP 495          
BLAST of mRNA_C-australica_Contig_995.1.3 vs. uniprot
Match: D7FSH8_ECTSI (RHD3b, RHD3/Sey1 family GTPase involved in the ER-to-Golgi traffic n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSH8_ECTSI)

HSP 1 Score: 219 bits (559), Expect = 1.000e-61
Identity = 141/406 (34.73%), Postives = 218/406 (53.69%), Query Frame = 0
Query:   34 LSMGAKDVVVSCASSDVIVFNVLQQDLHRAGALSELMPALEEALALSEDALEEGPKKKELIIVVRDF-DGDSSEEAALAGSALATLEGMWESAARPEAATGAKLADYFTVQMEYLPHHTLASSAFSXXXXXXXXXXXXXSPQAAAGVLERL-QKMSALAGPDVSAPSAKEMKAAAVGGKAVEQCFASYTNLVLGLSKAFPGLDEEFGEHQDDIAEDVMAEFKDLCSGVGGS--VVGKKRKELMSAMARDASARYAEQLALLKAAATGKFRQELANVRVGPGLGKEMSNALEVADKYFRSTAPALKCKLVQDSSQSERKALITDLREFADERLQLAKLQGATQSSNRLFSRPVALNFHWLLPKPFGTDARQSILSVDDKAAFASTNVRADAMFFEF-APTGEEIEGP 434
            + +GA   +VS A SD  ++NVL  DL R  ALS++ PALEE L L ED + +  + K  ++ VRD  DGD +E     G     L+ +W +A +PE   G+ L+D   V++  LPHH+ AS  +              +    A  + RL Q++S+ AGP   +  +  + A+ +   A  +C AS+ +LV  +   F  L+ +FGE  D + + V+ E+ +   GV G+  V+ +K+ EL     R+   R+A+Q+ LL+ AA  KF + L+ +RV P +GK+M +A++ ADK+F  T   +  +     S S RK L  ++REFA ERLQL + QG      +   +PV + FHW LPKPFG  AR+S L + D   +     +A  MF E   P+ +E+  P
Sbjct:  106 VEVGAGQAMVSLAVSDATIYNVLVHDLRRPDALSDVQPALEELLTLYEDGVVDPEQPKTFVVAVRDCEDGDEAELEKRVGE---RLQAIWAAAVKPEGFAGSALSDVLDVKVFTLPHHSFASDEYLLGAGLLKNSVMDGAAGTPAVEVARLLQQVSSYAGPATESVGSNALTASFISSSAAVKCMASFKSLVGRMGAGFEELNTDFGELCDGVIDTVLQEYDEAVDGVSGASGVLSRKKAELKRHCLRELGLRHADQVDLLRTAARAKFDETLSGLRVSPDVGKQMMDAIQEADKFFAKTVRGMNSRHGSWPSNSVRKELRDEMREFASERLQLVQAQGGMVRMQK--RKPVGMAFHWFLPKPFGQQARESRLDLTDPMRYTYKANQASPMFMELLCPSAQEVSLP 506          
BLAST of mRNA_C-australica_Contig_995.1.3 vs. uniprot
Match: M2XGH2_GALSU (GTP-binding protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XGH2_GALSU)

HSP 1 Score: 114 bits (286), Expect = 9.050e-24
Identity = 115/407 (28.26%), Postives = 186/407 (45.70%), Query Frame = 0
Query:   37 GAKDVVVSCASSDVIVFNVLQQDLHR--AGALSELMPALEEALALSEDALEEGPKKKELIIVVRDFDGDSSEEAALAGSALATLEGMWESAARPEAATGAK-LADYFTVQMEYLPHHTLASSAF---------------SXXXXXXXXXXXXXSPQAAAG-----VLERLQKMSALAGPDVSAPSAKEMKAAAVGGKAVEQCFASYTNLVLGLS-KAFPG-LDEEFGEHQDDIAEDVMAEFKDLCSGVGGS-VVGKKRKELMSAMARDASARYAEQLALLKAAATGKFRQELANVRVGPGLGKEMSNALEVADKYFRSTAPALKCKLVQDSSQSERKALITDLREFADERLQLAKLQGATQSSNRLFSRPVALNFHWLLPKPFGTDARQSILSVD-DKAAFASTNVR 416
            G   V ++ A SDVIV +V  +D+ R  A  L     A+E+ + L    +     KK L++V RD + + +    L  + +     +    AR E +TG K ++D F ++    PH+     +F               S             +P          V ERL   S L    V+AP   EM A        EQ   +Y + V     K   G + + FG+   ++  +++A + D  +   G+    +KRK L+  +  D    Y++ L  LK  +   FR+ L+++++   + K+++ A++ ADKYF S A  LKCK       SERK L++ +RE A ERLQLA++QGA     R+   P++L+ ++L P PFG D+R      + +K  F   N R
Sbjct:  113 GESSVRLATAVSDVIVLHVHSRDVGRLEATGLPLFKNAIEDVMKLRSLGVLSSHSKKLLVVVFRDVESEETNREDLITAFIEDCNSLL--GAREEGSTGIKKISDLFDIEFALFPHYVFHRQSFERTATSLRERFREPTSDDYFFIEDRYSNPTPAMEISLHITQVWERLGIESYL----VTAPE-YEMNATFHCDNCFEQALTTYFSRVREWKRKTEEGRIIQNFGKESTELRNEILALYDDEAAQYKGTKAFERKRKSLLERVQLDLYTMYSKLLNKLKEVSFDIFRESLSHIQISDNVEKDVNKAIKAADKYFCSRAELLKCKGTSWQFDSERKELLSVMRENATERLQLARIQGAYVPPARM---PISLSLNYLHPNPFGKDSRYEDFQAEKEKVKFDPGNTR 509          
BLAST of mRNA_C-australica_Contig_995.1.3 vs. uniprot
Match: A0A7S2FW41_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FW41_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.100e-20
Identity = 104/351 (29.63%), Postives = 163/351 (46.44%), Query Frame = 0
Query:   66 LSELMPALEEALALSEDA-LEEGPKKKELIIVVRDFDGDSSEEAALAGSALATLEGMWESAARPEAATGAKLADYFTVQMEYLPHHTLASSAFSXXXXXXXXXXXXXSPQAAAGVLERLQKMSALAGPDVS-APSAKEMKAAAVGGKAVEQCFASYTNLVLGLSKAFPGLD-EEFGEHQDDIAEDVMAEFKDLCSGVGGSVV-GKKRKELMSAMARDASARYAEQLALLKAAATGKFRQELANVRVGPG-LGKEMSNALEVADKYFRSTAPALKCKLVQDSSQSERKALITDLREFADERLQLAKLQGATQSSNRLFSRPVALNFHWLLPKPFGT-DARQSILSVDDKAAF 410
            LS+L   +E  LA + D  LEEG  K  + +   D + +SSE  AL  S L     MW +A +P     A L+D+  V +  LP     + A +             S  A+AGV  RL  + A  G     AP+  +M++      A+E  F ++ + +  LS A   +D EEFG   DD  +  +  F    +   G+     K KEL+S +  +    Y  +LA L   A  + ++    + +  G L K+M   ++ AD +F + A  + C+    S+  ER+A+++ +R F  ERLQ+  L G      R   +PVA++ HWL+  P    DA Q  LS DD+  +
Sbjct:   76 LSDLQTKVEALLARTADGTLEEGATK--VFVACSDCEAESSEVEALVRSELVA---MWANAVKPAQYEAAPLSDFVDVDVRVLPDSRNPTCAAAVDGLK--------SALASAGVSNRLDGVVASGGGSGGGAPAQADMESLFACHGAMEGAFQTFVDQLPALSAALAEIDVEEFGAACDDALDAAVQHFNGASAAFDGTASKAAKGKELVSKVHGELRPLYLAKLAELNELANSRLKKSFRKLSITDGSLLKDMEAGVKDADAFFSANAKKMVCRGAGWSANQERRAMVSKMRAFVKERLQVLHLGGKYVPGMR--RKPVAVSLHWLVRHPLQLLDAIQDSLSFDDEMEY 411          
BLAST of mRNA_C-australica_Contig_995.1.3 vs. uniprot
Match: A0A8J5XDG1_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XDG1_DIALT)

HSP 1 Score: 101 bits (251), Expect = 2.820e-19
Identity = 137/441 (31.07%), Postives = 196/441 (44.44%), Query Frame = 0
Query:   13 EDEGVAVMEVDSSISMAGDKALSMGAKDVVVSCASSDVIVFNV-----LQQDLHRAGALSELMPALEEALALSEDALEEGPKKKELIIVVRDFDGDSSEEA-ALAGSALATLEGMWESAARPEAATGA---KLADYFTVQMEYLPHHTLASSAF----SXXXXXXXXXXXXXSPQAAAGVLERLQKMSALAGPDVSAP--SAKEMKAAAVGGKAVEQCFASYTNLVLGLSKAFPGLDEEFGEHQDDIAED-------VMAEFKDLCSGVGGSVV-GKKRKELMSAMARDASARYAEQLALLKAAATGKFRQELANVRVGPG-LGKEMSNALEVADKYFRSTAPALKCKLVQD--SSQSERKALITDLREFADERLQLAKLQGA-TQSSNRLFSRPVALNFHWLLPKPFGTDARQSILSVDDKAAF---ASTNVRADAMFFE 423
            EDE +AV+         GD      A D  V+ A S V+V        L +     G LSEL PA+E  L +S       P+K+ LI+V+R+++ D+S  A AL    +A LE MW  AA P A +G     LAD   VQ+  LP     S+AF    S   XXXXXXXXXX    AA +L  L   S LA   V     SA E+ AA    +A    F  + +    L       D+   E    +A++        +  + D      GS V  K+R  L SA+  D    +   L L +  A     +  AN+  G G L  ++  A++     FR  A  L  +      S   E K L  +L++ + E ++ A+LQG     + R+   P  ++ HWL P PFG D R   LS  D+ ++   A + +R + M F+
Sbjct:   81 EDEKLAVLNSAGFGERPGDAPAFDEAADTAVAVALSQVVVLTAFFREFLAEPADAVGRLSELRPAMELLLRMSRQPGASPPRKRSLILVLREYEPDASASAQALRERFVALLEEMW--AALPAARSGGGAPALADLLDVQVAPLPSPKADSAAFTAAASELRXXXXXXXXXXXXXPAAQLLFSLAAASKLASSSVGPGFVSADELAAALACARAASAAFDEFASATATLHARAASRDDPLREPPAALADECSKALGAALRAYDDATVAHAGSDVRAKRRATLRSAILADLRPVHTHALQLARIGAVIDLSKRAANLTAGEGNLHADLQAAVDDVTASFREKAAMLTMREAAGAWSCGLEEKMLQQELQQMSAEMVRRAQLQGLYAPPAGRV---PTGVSLHWLHPNPFGKDLRNDQLSATDRLSYSQKAKSLLRLEPMRFD 516          
BLAST of mRNA_C-australica_Contig_995.1.3 vs. uniprot
Match: A0A6H5JTE5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTE5_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.770e-10
Identity = 40/94 (42.55%), Postives = 52/94 (55.32%), Query Frame = 0
Query:  342 SQSERKALITDLREFADERLQLAKLQGATQSSNRLFSRPVALNFHWLLPKPFGTDARQSILSVDDKAAFASTNVRADAMFFEF-APTGEEIEGP 434
            S S RK L  ++REFA ERLQL + QG      +   +PV + FHW LPKPFG  AR+S L + D   +     +A  MF E   P  +E+E P
Sbjct:   10 SNSVRKELRDEMREFASERLQLVQAQGGMVRMQK--RKPVGMAFHWFLPKPFGQQARESRLDLTDPMRYTYKANQASPMFMELLCPPAQEVEFP 101          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_995.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A835ZAQ3_9STRA5.000e-7538.51Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
D7FSH8_ECTSI1.000e-6134.73RHD3b, RHD3/Sey1 family GTPase involved in the ER-... [more]
M2XGH2_GALSU9.050e-2428.26GTP-binding protein n=1 Tax=Galdieria sulphuraria ... [more]
A0A7S2FW41_9STRA1.100e-2029.63Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A8J5XDG1_DIALT2.820e-1931.07Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A6H5JTE5_9PHAE1.770e-1042.55Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008803RHD3/Sey1PFAMPF05879RHD3coord: 44..172
e-value: 2.2E-12
score: 46.0
IPR008803RHD3/Sey1PANTHERPTHR45923PROTEIN SEY1coord: 45..376
NoneNo IPR availablePANTHERPTHR45923:SF2PROTEIN SEY1coord: 45..376

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_995contigC-australica_Contig_995:75..2886 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_995.1.3mRNA_C-australica_Contig_995.1.3Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_995 35..3150 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_995.1.3 ID=prot_C-australica_Contig_995.1.3|Name=mRNA_C-australica_Contig_995.1.3|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=462bp
MFGDEAASGGVLEDEGVAVMEVDSSISMAGDKALSMGAKDVVVSCASSDV
IVFNVLQQDLHRAGALSELMPALEEALALSEDALEEGPKKKELIIVVRDF
DGDSSEEAALAGSALATLEGMWESAARPEAATGAKLADYFTVQMEYLPHH
TLASSAFSSAAAALKRRLLASSPQAAAGVLERLQKMSALAGPDVSAPSAK
EMKAAAVGGKAVEQCFASYTNLVLGLSKAFPGLDEEFGEHQDDIAEDVMA
EFKDLCSGVGGSVVGKKRKELMSAMARDASARYAEQLALLKAAATGKFRQ
ELANVRVGPGLGKEMSNALEVADKYFRSTAPALKCKLVQDSSQSERKALI
TDLREFADERLQLAKLQGATQSSNRLFSRPVALNFHWLLPKPFGTDARQS
ILSVDDKAAFASTNVRADAMFFEFAPTGEEIEGPPTVRGVYDSHEFSSIQ
VRKCPYESHDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008803RHD3/Sey1