Homology
BLAST of mRNA_C-australica_Contig_9853.1.1 vs. uniprot
Match:
A0A222E4E5_9RHOB (Anaphase-promoting complex subunit 4 WD40 domain protein n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E4E5_9RHOB)
HSP 1 Score: 441 bits (1135), Expect = 8.740e-145
Identity = 227/246 (92.28%), Postives = 233/246 (94.72%), Query Frame = 0
Query: 1 FTLPELRPLNSISLDTKGPVRALAFSSDSTWLAVAQAGQAPGVSVLQVDTGAQKWRRATDEPVSALRYSPDGGTLAFAMSGSVAMHAADTGVFLREMDLADEEFVEISGLAFTRDGGGLIVGATNTPGLRWHVDTGALAERIGPALGGRLLGLTGAGDAAVFVAKSGTAIQVFDLEGGNLLRNIDKYRFADVALTPDGTRRIGHVGGAAPGLILVDPDSEATRVILQRDGDFVTGLAFSPDSTRLA 246
FTLP LRPL+SISLDTKGPVRALAFSSDSTWLAVAQAGQA GVSVLQVDTGAQKWRR+TDEPVSALRYSPDGGTLAFAMSGSVAMH A+TGVFLREMD ADEE VEISGLAFTRDGGGLI GA NT GLRWHVDTGALAERIGPALGG+LLGLT AGDAAVFVAKSGTAIQVFDLEGGNLLRN+DKYRFADVALTPDGTR IGHVGGAAPGLILVDPDSEATR LQR GDFV+GLAFSPDSTRLA
Sbjct: 454 FTLPALRPLSSISLDTKGPVRALAFSSDSTWLAVAQAGQASGVSVLQVDTGAQKWRRSTDEPVSALRYSPDGGTLAFAMSGSVAMHVAETGVFLREMDFADEELVEISGLAFTRDGGGLIAGAKNTSGLRWHVDTGALAERIGPALGGQLLGLTAAGDAAVFVAKSGTAIQVFDLEGGNLLRNMDKYRFADVALTPDGTRLIGHVGGAAPGLILVDPDSEATRATLQRAGDFVSGLAFSPDSTRLA 699
BLAST of mRNA_C-australica_Contig_9853.1.1 vs. uniprot
Match:
A0A239H9N3_9RHOB (WD40 repeat n=1 Tax=Antarctobacter heliothermus TaxID=74033 RepID=A0A239H9N3_9RHOB)
HSP 1 Score: 265 bits (678), Expect = 1.650e-78
Identity = 140/246 (56.91%), Postives = 171/246 (69.51%), Query Frame = 0
Query: 1 FTLPELRPLNSISLDTKGPVRALAFSSDSTWLAVAQAGQAPGVSVLQVDTGAQKWRRATDEPVSALRYSPDGGTLAFAMSGSVAMHAADTGVFLREMDLADEEFVEISGLAFTRDGGGLIVGATNTPGLRWHVDTGALAERIGPALGGRLLGLTGAGDAAVFVAKSGTAIQVFDLEGGNLLRNIDKYRFADVALTPDGTRRIGHVGGAAPGLILVDPDSEATRVILQRDGDFVTGLAFSPDSTRLA 246
FTLP L PL S++L+ GP ALAFS D TWLAVAQ+G+ VS L+ +TG ++WR ATDE VA+H A+TG +LR M+ A + ISGLAFTRDG GLI GA +T GL W +D+G L RIGPA+GGRLLG++ AGDAAVFV+KSG +QVFDL+GG L R +D + F DVALTPDG R +G VGGAAPGLIL DP + +L+RDG+FV+ LAFSPDSTRLA
Sbjct: 454 FTLPTLGPLFSVALNEDGPASALAFSPDGTWLAVAQSGKVSAVSGLRGETGERQWRMATDEXXXXXXXXXXXXXXXXXXXXXVAVHVAETGAYLRGMEPAGDAPAAISGLAFTRDGSGLIAGAADTFGLHWQLDSGTLTGRIGPAMGGRLLGVSAAGDAAVFVSKSGGGVQVFDLDGGGLRRGLDAHEFTDVALTPDGIRLMGLVGGAAPGLILADPVNGVAHSVLKRDGEFVSALAFSPDSTRLA 699
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_9853.1.1 vs. uniprot
Analysis Date: 2022-09-16 (
Diamond blastp: OGS1.0 vs UniRef90 )
Total hits: 2
F T L P E L R P L N S I S L D T K G P V R A L A F S S D S T W L A V A Q A G Q A P G V S V L Q V D T G A Q K W R R A T D E P V S A L R Y S P D G G T L A F A M S G S V A M H A A D T G V F L R E M D L A D E E F V E I S G L A F T R D G G G L I V G A T N T P G L R W H V D T G A L A E R I G P A L G G R L L G L T G A G D A A V F V A K S G T A I Q V F D L E G G N L L R N I D K Y R F A D V A L T P D G T R R I G H V G G A A P G L I L V D P D S E A T R V I L Q R D G D F V T G L A F S P D S T R L A 20 40 60 80 100 120 140 160 180 200 220 240 Expect = 8.74e-145 / Id = 92.28 Expect = 1.65e-78 / Id = 56.91 Sequence A0A222E4E5_9RHOB A0A239H9N3_9RHOB back to top
InterPro
Analysis Name:
InterProScan on OGS1.0
Date Performed: 2022-09-29
F T L P E L R P L N S I S L D T K G P V R A L A F S S D S T W L A V A Q A G Q A P G V S V L Q V D T G A Q K W R R A T D E P V S A L R Y S P D G G T L A F A M S G S V A M H A A D T G V F L R E M D L A D E E F V E I S G L A F T R D G G G L I V G A T N T P G L R W H V D T G A L A E R I G P A L G G R L L G L T G A G D A A V F V A K S G T A I Q V F D L E G G N L L R N I D K Y R F A D V A L T P D G T R R I G H V G G A A P G L I L V D P D S E A T R V I L Q R D G D F V T G L A F S P D S T R L A 20 40 60 80 100 120 140 160 180 200 220 240 Expect = 1.4E-11 / Score = 45.9 Expect = 1.8E-6 / Score = 29.0 Score = Sequence G3DSA:2.130.10.10 G3DSA:2.130.10.10 SSF82171
IPR Term IPR Description Source Source Term Source Description Alignment
IPR015943 WD40/YVTN repeat-like-containing domain superfamily GENE3D 2.130.10.10 coord: 6..137 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GENE3D 2.130.10.10 coord: 152..246 None No IPR available SUPERFAMILY 82171 DPP6 N-terminal domain-like coord: 15..244
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence
>prot_C-australica_Contig_9853.1.1 ID=prot_C-australica_Contig_9853.1.1|Name=mRNA_C-australica_Contig_9853.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=246bp back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
Term Definition
IPR015943 WD40/YVTN_repeat-like_dom_sf