prot_C-australica_Contig_982.5.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_982.5.1
Unique Nameprot_C-australica_Contig_982.5.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length259
Homology
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BLAST of mRNA_C-australica_Contig_982.5.1 vs. uniprot
Match: A0A6S9I198_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9I198_HETAK)

HSP 1 Score: 84.7 bits (208), Expect = 5.320e-15
Identity = 68/271 (25.09%), Postives = 123/271 (45.39%), Query Frame = 0 
Query:    3 YEDFCSCFTRVWTCFTEPASPSSTTPCLEALSHKDYHGSWMPGHPTAGAGGGPRHSTFLTNPHYPINVEHNDTYMRVSLDRVDRMWGHNPSSVYIPA-GFILVRLKGIKPRLTRYHPSKVAATSGCLMNGPHLTAEMVLASGRYAIVPFTRE-----------PLQRPESFKLSVAARGVVEWEQVDEDDEDILMSDDE----------GKWEEKELPLLH--ERLALEDDS-------RLIDTVHKQVAELAQLVEMMRSEVKLKDAAVA 242
            +E+FC  + +V+ C   P   S             Y G W+PG   +GAGG P+++TF TNP Y  +VE   T +   + + D  W    +  Y  A G++L++L G   R+ ++ P ++A  S        +  +  L  GRYA++P T +            +   +   L      V + + ++E++E+ L ++ +          G+ +   LP  H  E L  E+D          ++++ +QVA+LA LV  ++ ++K  +  VA
Sbjct:  340 WEEFCREYNQVFVCVDFPEGGSGVR----------YRGQWVPGDGKSGAGGSPKYATFPTNPQYTFSVEEAGTKVVGMVSQKDLRWQVAATEKYTTAIGYVLMKLSGNTSRVKKFTPKQMAGMSRTYSPSRSIAGQATLLPGRYAMIPTTFDNNASAAIDYIMEIYTDKPITLEQEGDAVADLDDLEEEEEEELAAEGKAADAVSEEKAGEGDRAALPPGHMAEDLEAEEDDDDESPDHMALESLQRQVADLAGLVVALQGDIKGLEGTVA 600
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_982.5.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6S9I198_HETAK5.320e-1525.09Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.120.380coord: 34..177
e-value: 2.9E-14
score: 55.3
IPR022682Peptidase C2, calpain, large subunit, domain IIIPFAMPF01067Calpain_IIIcoord: 38..157
e-value: 1.0E-8
score: 35.6
IPR036213Calpain large subunit, domain III superfamilySUPERFAMILY49758Calpain large subunit, middle domain (domain III)coord: 37..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_982contigC-australica_Contig_982:8481..10126 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_982.5.1mRNA_C-australica_Contig_982.5.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_982 8387..10353 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_982.5.1 ID=prot_C-australica_Contig_982.5.1|Name=mRNA_C-australica_Contig_982.5.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=259bp
MTYEDFCSCFTRVWTCFTEPASPSSTTPCLEALSHKDYHGSWMPGHPTAG
AGGGPRHSTFLTNPHYPINVEHNDTYMRVSLDRVDRMWGHNPSSVYIPAG
FILVRLKGIKPRLTRYHPSKVAATSGCLMNGPHLTAEMVLASGRYAIVPF
TREPLQRPESFKLSVAARGVVEWEQVDEDDEDILMSDDEGKWEEKELPLL
HERLALEDDSRLIDTVHKQVAELAQLVEMMRSEVKLKDAAVAAQTGEGVK
YSFRCKDI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022682Calpain_domain_III
IPR036213Calpain_III_sf