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Homology
BLAST of mRNA_C-australica_Contig_982.5.1 vs. uniprot
Match: A0A6S9I198_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9I198_HETAK) HSP 1 Score: 90.9 bits (224), Expect = 1.070e-16 Identity = 70/275 (25.45%), Postives = 126/275 (45.82%), Query Frame = 1 Query: 37 FWMTYEDFCSCFTRVWTCFTEPASPSSTTPCLEALSHKDYHGSWMPGHPTAGAGGGPRHSTFLTNPHYPINVEHNDTYMRVSLDRVDRMWGHNPSSVYIPA-GFILVRLKGIKPRLTRYHPSKVAATSGCLMNGPHLTAEMVLASGRYAIVPFTRE-----------PLQRPESFKLSVAARGVVEWEQVDEDDEDILMSDDE----------GKWEEKELPLLH--ERLALEDDS-------RLIDTVHKQVAELAQLVEMMRSEVKLKDAAVA 768
FW+ +E+FC + +V+ C P S Y G W+PG +GAGG P+++TF TNP Y +VE T + + + D W + Y A G++L++L G R+ ++ P ++A S + + L GRYA++P T + + + L V + + ++E++E+ L ++ + G+ + LP H E L E+D ++++ +QVA+LA LV ++ ++K + VA
Sbjct: 336 FWIEWEEFCREYNQVFVCVDFPEGGSGVR----------YRGQWVPGDGKSGAGGSPKYATFPTNPQYTFSVEEAGTKVVGMVSQKDLRWQVAATEKYTTAIGYVLMKLSGNTSRVKKFTPKQMAGMSRTYSPSRSIAGQATLLPGRYAMIPTTFDNNASAAIDYIMEIYTDKPITLEQEGDAVADLDDLEEEEEEELAAEGKAADAVSEEKAGEGDRAALPPGHMAEDLEAEEDDDDESPDHMALESLQRQVADLAGLVVALQGDIKGLEGTVA 600
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Seed ortholog | 2880.D7FSU2 |
| PFAMs | Calpain_III,EF-hand_5,EF-hand_7,EF-hand_8,Peptidase_C2,WW |
| Model size | 913 |
| Max annot lvl | 2759|Eukaryota |
| KEGG ko | ko:K08574,ko:K08579 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Evalue | 4.08e-35 |
| EggNOG OGs | KOG0045@1|root,KOG0045@2759|Eukaryota |
| Description | calcium-dependent cysteine-type endopeptidase activity |
| Cds size | 777 |
| COG category | O |
| BRITE | ko00000,ko01000,ko01002 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682588849.5608876-UTR-C-australica_Contig_982:8386..8480 | 1682588849.5608876-UTR-C-australica_Contig_982:8386..8480 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_982 8387..8480 - |
| 1682588849.6533194-UTR-C-australica_Contig_982:10126..10136 | 1682588849.6533194-UTR-C-australica_Contig_982:10126..10136 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_982 10127..10136 - |
| 1682588849.6656559-UTR-C-australica_Contig_982:10321..10353 | 1682588849.6656559-UTR-C-australica_Contig_982:10321..10353 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_982 10322..10353 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682588849.5733445-CDS-C-australica_Contig_982:8480..8705 | 1682588849.5733445-CDS-C-australica_Contig_982:8480..8705 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_982 8481..8705 - |
| 1682588849.583407-CDS-C-australica_Contig_982:8845..8927 | 1682588849.583407-CDS-C-australica_Contig_982:8845..8927 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_982 8846..8927 - |
| 1682588849.593209-CDS-C-australica_Contig_982:9017..9073 | 1682588849.593209-CDS-C-australica_Contig_982:9017..9073 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_982 9018..9073 - |
| 1682588849.6031764-CDS-C-australica_Contig_982:9379..9470 | 1682588849.6031764-CDS-C-australica_Contig_982:9379..9470 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_982 9380..9470 - |
| 1682588849.613362-CDS-C-australica_Contig_982:9599..9641 | 1682588849.613362-CDS-C-australica_Contig_982:9599..9641 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_982 9600..9641 - |
| 1682588849.6237388-CDS-C-australica_Contig_982:9715..9848 | 1682588849.6237388-CDS-C-australica_Contig_982:9715..9848 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_982 9716..9848 - |
| 1682588849.6348119-CDS-C-australica_Contig_982:9978..10126 | 1682588849.6348119-CDS-C-australica_Contig_982:9978..10126 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_982 9979..10126 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_982.5.1 >prot_C-australica_Contig_982.5.1 ID=prot_C-australica_Contig_982.5.1|Name=mRNA_C-australica_Contig_982.5.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=259bp
MTYEDFCSCFTRVWTCFTEPASPSSTTPCLEALSHKDYHGSWMPGHPTAG
AGGGPRHSTFLTNPHYPINVEHNDTYMRVSLDRVDRMWGHNPSSVYIPAG
FILVRLKGIKPRLTRYHPSKVAATSGCLMNGPHLTAEMVLASGRYAIVPF
TREPLQRPESFKLSVAARGVVEWEQVDEDDEDILMSDDEGKWEEKELPLL
HERLALEDDSRLIDTVHKQVAELAQLVEMMRSEVKLKDAAVAAQTGEGVK
YSFRCKDI* back to topmRNA from alignment at C-australica_Contig_982:8387..10353- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_982.5.1 ID=mRNA_C-australica_Contig_982.5.1|Name=mRNA_C-australica_Contig_982.5.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1967bp|location=Sequence derived from alignment at C-australica_Contig_982:8387..10353- (Chrysoparadoxa australica CS_1217)
GTGAAGGCCAAGCGCCAGGCTCAACCAGAGAGGTATGAGCAGGGCAGCCT
AGGTGCTAAGGCCAAAGGTCACTCTTGGTGCAAGCAGATGGAATGAGATG
GGTTGGCACTAGCATAAGCCTTATCCCTTTGGGGCCAGGTGTGTTATTAC
ACCTTGTCGGCCTTCTGAAGCTCACAGCCTGTTTCCTGTCCCCTTGTCCC
CCTTTGTATTGCCAGAGGACCTTCTGGATGACCTATGAAGACTTCTGCAG
CTGCTTCACGCGCGTGTGGACTTGCTTCACTGAGCCTGCTAGCCCCTCCA
GCACGACTCCATGCCTTGAAGCTCTCAGTCACAAAGATTATCATGGAAGC
TGGATGCCTGGCCACCCAACTGCCGGTGAGAAGACGAGAGCTGCATCGAT
AGCGATAGCGATAGCATGGACCTCCGATTCAGATTCAGCAGTGCAGTTGC
CTTTTGCCCTCATTCATTGCCTCACCACTGCTCATGACATCCTTCACTGT
CACAGGAGCCGGAGGTGGCCCTCGCCACAGTACCTTCCTCACCAACCCGC
ACTACCCAATCAATGTTGAGCACAATGATACGTACATGAGGGTATCGCTT
GATAGGGTCGATAGGATGTGGGGTCACAATCCCTCCAGGTACGATTAAAA
AAACTAAGACCAGACTTACTGTGCTGTCGAATATGTCTAAATGTTTTCGA
TCCCAACCACAGCGTGTACATTCCTGCGGGCTTTATACTTGTGAGATTGA
AGGGGTGCGTAATGCTAGCTCATCTACTCCTCTACCTTTCCTCTCCTCCG
AGACTGAGACTTCCTTAGGTCACGATGGCACTGCTAGATGACGAAGATCC
ACAATTTATCTTACGTGCCACTCCTCTCTACAGGATTAAACCACGCTTGA
CTCGATACCACCCCAGTAAAGTGGCTGCTACAAGTGGTTGCCTCATGAAC
GGTCCTCACCTCACTGCTGAGATGGTGGGTCAACCAGATCACTGCCAGAT
CACTGCCAGATCAGTCCATAACACCAAGCTGATCACCGCCCTCATGCGTT
TGTACTAAGCCTAACCTCTGCCTTTGACTAGCCCTGATGACCTTGGCTTG
CTAACTCCAGACTTGCTCCACTTGTTATACCTGTATCCATCCTCCAATAT
ATGACATAGCCTGTGAACTCTTTCGTAAGCCTTCATTTAATCATTGCTTA
ACTAATGATGCCCCCTTCTGCCCCCTTACATTCAGCTGCTCAAACTTACC
CCTTAATCTTCTCTTCTCCCCCCAACCCAGGTCCTGGCAAGCGGCCGATA
TGCAATAGTGCCCTTTACCAGGGAGCCACTCCAAAGGTATTATGCCTACC
AGCTTGACACGTATCCACACTGCTGCTGCAATAAGTGAGTGATGCAATGG
ACCCCATGCTCCCCGCCATTATCCAGACCGGAGAGCTTCAAATTGAGCGT
TGCAGCAAGAGGCGTTGTTGAATGGGAGCAGGTTGATGAAGATGATGAGG
ACATACTGGTACATCTTCACCTCGTGTCAACAAATGCTTTGACTTGCTAC
CTCCTCCTTCATCCTTCTTTTCTTACTTGTACTAACTAGAAGTCCTGCCA
CCTTCAGCTCTCCCTCCCTAATCACATGCCTGCTCCCTTGTCCTCCAGAT
GAGTGATGATGAGGGTAAATGGGAGGAGAAAGAGCTGCCACTGCTGCACG
AGAGGCTAGCGCTGGAGGACGACAGCCGTCTGATAGATACCGTTCACAAG
CAAGTGGCAGAGCTGGCACAGCTTGTGGAGATGATGCGGAGTGAGGTGAA
GCTCAAGGATGCAGCTGTTGCTGCTCAAACAGGGGAGGGGGTTAAGTACT
CATTCAGGTGTAAAGATATATAACCTCCCTGAGATTTTTTCCTAGTGAGA
CAAGAGGACTCGCTGTAACTAAGCAGAGCAGGTGCATGCAGCAATGAAAC
ACTGCCTCTTGTGATGA back to topCoding sequence (CDS) from alignment at C-australica_Contig_982:8387..10353- >mRNA_C-australica_Contig_982.5.1 ID=mRNA_C-australica_Contig_982.5.1|Name=mRNA_C-australica_Contig_982.5.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=777bp|location=Sequence derived from alignment at C-australica_Contig_982:8387..10353- (Chrysoparadoxa australica CS_1217)
ATGACCTATGAAGACTTCTGCAGCTGCTTCACGCGCGTGTGGACTTGCTT
CACTGAGCCTGCTAGCCCCTCCAGCACGACTCCATGCCTTGAAGCTCTCA
GTCACAAAGATTATCATGGAAGCTGGATGCCTGGCCACCCAACTGCCGGA
GCCGGAGGTGGCCCTCGCCACAGTACCTTCCTCACCAACCCGCACTACCC
AATCAATGTTGAGCACAATGATACGTACATGAGGGTATCGCTTGATAGGG
TCGATAGGATGTGGGGTCACAATCCCTCCAGCGTGTACATTCCTGCGGGC
TTTATACTTGTGAGATTGAAGGGGATTAAACCACGCTTGACTCGATACCA
CCCCAGTAAAGTGGCTGCTACAAGTGGTTGCCTCATGAACGGTCCTCACC
TCACTGCTGAGATGGTCCTGGCAAGCGGCCGATATGCAATAGTGCCCTTT
ACCAGGGAGCCACTCCAAAGACCGGAGAGCTTCAAATTGAGCGTTGCAGC
AAGAGGCGTTGTTGAATGGGAGCAGGTTGATGAAGATGATGAGGACATAC
TGATGAGTGATGATGAGGGTAAATGGGAGGAGAAAGAGCTGCCACTGCTG
CACGAGAGGCTAGCGCTGGAGGACGACAGCCGTCTGATAGATACCGTTCA
CAAGCAAGTGGCAGAGCTGGCACAGCTTGTGGAGATGATGCGGAGTGAGG
TGAAGCTCAAGGATGCAGCTGTTGCTGCTCAAACAGGGGAGGGGGTTAAG
TACTCATTCAGGTGTAAAGATATATAA back to top
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