prot_C-australica_Contig_982.2.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_982.2.1
Unique Nameprot_C-australica_Contig_982.2.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length211
Homology
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match: D7FZR3_ECTSI (Pentapeptide repeat n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR3_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 1.440e-21
Identity = 94/160 (58.75%), Postives = 104/160 (65.00%), Query Frame = 0
Query:   50 TLAGVLLSFAPLCTPPPTALAISGGGLDYAGLNLKEKDFSKGSYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFEGVGDISGVDFTTALMQPRTQRALCQRPDAKGTNPATGVDTRESLMC 209
            TLA VL++  PL   P  A+AISGGGLDYAGLNL  +D SKG YK         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                      +   VGDISG DFT AL++    + LC RPDAKGTNP TG DTR+SL+C
Sbjct:   76 TLAAVLVAGVPLLVNPSPAVAISGGGLDYAGLNLTGQDLSKGKYKSKDFSGSIAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEEADLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLC 235          
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match: A0A6H5KFC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KFC5_9PHAE)

HSP 1 Score: 94.7 bits (234), Expect = 8.380e-21
Identity = 102/160 (63.75%), Postives = 111/160 (69.38%), Query Frame = 0
Query:   50 TLAGVLLSFAPLCTPPPTALAISGGGLDYAGLNLKEKDFSKGSYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFEGVGDISGVDFTTALMQPRTQRALCQRPDAKGTNPATGVDTRESLMC 209
            TLA VL++  PL   P    AISGGGLDYAGLNL  +D S G YK  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                   +   VGDISG DFT AL++    + LC RPDAKGTNP TG DTR+SL+C
Sbjct:   19 TLAAVLMAGVPLLVDPSPVAAISGGGLDYAGLNLTGQDLSNGKYKSKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLEGTIMTNAVATGSYFGNNMNNVGDISGADFTDALIRKDVAKILCARPDAKGTNPTTGTDTRDSLLC 178          
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match: A0A7S0UFP4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UFP4_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.010e-11
Identity = 95/162 (58.64%), Postives = 106/162 (65.43%), Query Frame = 0
Query:   48 AATLAGVLLSFAPLCTPPPTALAISGGGLDYAGLNLKEKDFSKGSYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFEGVGDISGVDFTTALMQPRTQRALCQRPDAKGTNPATGVDTRESLMC 209
            A T A +LL+ +   T    A A+SGGGLD+AGL++  +DFSKG YK                   XXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXX         G DFT A   P+T   +C RPD KGTNP TGVDTR+S MC
Sbjct:  111 ATTAAALLLASS---TFVQAAFAVSGGGLDFAGLDISNQDFSKGDYKGKDFTQVLARNTNFAGSNLXXXXXXXXXXXXXXXXXXXXXXXXXEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGADFTDAQFPPKTLALMCDRPDMKGTNPTTGVDTRDSAMC 269          
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match: A0A7S2SQY3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQY3_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.720e-10
Identity = 28/49 (57.14%), Postives = 37/49 (75.51%), Query Frame = 0
Query:  161 SFEGVGDISGVDFTTALMQPRTQRALCQRPDAKGTNPATGVDTRESLMC 209
            + +  G+I G DFT ++M+   Q+ LC+RPDAKGTNP TGVDTR+SL C
Sbjct:  189 TLDQAGNIEGADFTDSIMRETMQKKLCERPDAKGTNPKTGVDTRDSLFC 237          
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match: A0A7R9WPJ1_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WPJ1_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 3.290e-10
Identity = 30/49 (61.22%), Postives = 35/49 (71.43%), Query Frame = 0
Query:  162 FEGVGDISGVDFTTALMQPRTQRALCQRPDAKGTNPATGVDTRESLMCK 210
            FEG+ DI G D+T   ++   Q+ LC  P AKGTNP TGVDTRESLMCK
Sbjct:  254 FEGIKDIEGSDWTDTYLRKDQQKYLCNHPTAKGTNPVTGVDTRESLMCK 302          
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match: A0A7S0L2L6_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L2L6_9EUKA)

HSP 1 Score: 65.9 bits (159), Expect = 1.260e-9
Identity = 30/48 (62.50%), Postives = 36/48 (75.00%), Query Frame = 0
Query:  165 VGD---ISGVDFTTALMQPRTQRALCQRPDAKGTNPATGVDTRESLMC 209
            +GD   I G DF+ A+M   TQR+LC RPDA GTNP TG++TRESLMC
Sbjct:  170 IGDAKSIRGADFSDAVMPTYTQRSLCDRPDATGTNPKTGIETRESLMC 217          
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match: A0A7R9W9U9_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W9U9_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 1.550e-9
Identity = 29/48 (60.42%), Postives = 35/48 (72.92%), Query Frame = 0
Query:  162 FEGVGDISGVDFTTALMQPRTQRALCQRPDAKGTNPATGVDTRESLMC 209
            F GV DI G D+T  +++   Q+ LC  P AKGTNP+TGVDTRESLMC
Sbjct:  213 FTGVKDIEGSDWTDTMLRKDQQKYLCNHPTAKGTNPSTGVDTRESLMC 260          
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match: A0A7S1U9V5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9V5_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 2.220e-9
Identity = 28/49 (57.14%), Postives = 33/49 (67.35%), Query Frame = 0
Query:  161 SFEGVGDISGVDFTTALMQPRTQRALCQRPDAKGTNPATGVDTRESLMC 209
            + E    I G DFT A+M  R  +ALC+R DA GTNP TGVDTR+SL C
Sbjct:  142 TIEDAASIKGADFTDAVMPERAMKALCERKDATGTNPKTGVDTRDSLFC 190          
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match: A0A448ZI41_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZI41_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.000e-9
Identity = 28/49 (57.14%), Postives = 35/49 (71.43%), Query Frame = 0
Query:  162 FEGVGDISGVDFTTALMQPRTQRALCQRPDAKGTNPATGVDTRESLMCK 210
            FEGV  I G D++   ++   Q+ LC+ P AKGTNP TGVDTRESLMC+
Sbjct:  186 FEGVKSIEGSDWSETFLRKDQQKYLCEHPTAKGTNPVTGVDTRESLMCR 234          
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Match: M1VAK2_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1VAK2_CYAM1)

HSP 1 Score: 65.5 bits (158), Expect = 3.120e-9
Identity = 112/170 (65.88%), Postives = 123/170 (72.35%), Query Frame = 0
Query:   40 GSAAQRAAAATLAGVLLSFAPLCTPPPTALAISGGGLDYAGLNLKEKDFSKGSYKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFEGVGDISGVDFTTALMQPRTQRALCQRPDAKGTNPATGVDTRESLMC 209
            G + +RA AA   G+ L    +C  P  A+AISGGGLDYAG  L E+D S     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    S   + +I   D+T AL++P  Q  LC R DAKG N  T  DTRESLMC
Sbjct:  102 GESQKRALAALFVGLCL----MCGLPKDAVAISGGGLDYAGQQLSEQDLSHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYWTESVLTIANIENTDWTDALLEPTWQMKLCSRSDAKGMNTLTNTDTRESLMC 267          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_982.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZR3_ECTSI1.440e-2158.75Pentapeptide repeat n=1 Tax=Ectocarpus siliculosus... [more]
A0A6H5KFC5_9PHAE8.380e-2163.75Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S0UFP4_9STRA1.010e-1158.64Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A7S2SQY3_9STRA1.720e-1057.14Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9WPJ1_9STRA3.290e-1061.22Hypothetical protein n=1 Tax=Craspedostauros austr... [more]
A0A7S0L2L6_9EUKA1.260e-962.50Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7R9W9U9_9STRA1.550e-960.42Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S1U9V5_9STRA2.220e-957.14Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A448ZI41_9STRA3.000e-957.14Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
M1VAK2_CYAM13.120e-965.88Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.160.20.80coord: 74..210
e-value: 7.2E-28
score: 98.5
NoneNo IPR availableSUPERFAMILY141571Pentapeptide repeat-likecoord: 76..176
IPR001646Pentapeptide repeatPFAMPF00805Pentapeptidecoord: 121..160
e-value: 4.9E-9
score: 35.6
IPR044213Thylakoid lumenal 15kDa protein 1-likePANTHERPTHR47200THYLAKOID LUMENAL 15 KDA PROTEIN 1, CHLOROPLASTICcoord: 33..210

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_982contigC-australica_Contig_982:2478..3745 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_982.2.1mRNA_C-australica_Contig_982.2.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_982 2468..5649 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_982.2.1 ID=prot_C-australica_Contig_982.2.1|Name=mRNA_C-australica_Contig_982.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=211bp
MKGAFAFSLLLAWGVESFFTGPSHLHAGPGVATNLSMAGGSAAQRAAAAT
LAGVLLSFAPLCTPPPTALAISGGGLDYAGLNLKEKDFSKGSYKGKDFSG
VIAKAVHFNGSDLRGSRFFKADLEKADFTGANLSTASLEQANLEGTVLTD
AILEDAYLSDSFEGVGDISGVDFTTALMQPRTQRALCQRPDAKGTNPATG
VDTRESLMCK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0016465peptide_repeat
IPR044213At2g44920-like