prot_C-australica_Contig_98.12.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_C-australica_Contig_98.12.1
Unique Name	prot_C-australica_Contig_98.12.1
Type	polypeptide
Organism	Chrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length	179

Homology

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BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: A0A448ZSM7_9STRA (Cytochrome c domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSM7_9STRA)

HSP 1 Score: 229 bits (584), Expect = 1.100e-72
Identity = 107/154 (69.48%), Postives = 120/154 (77.92%), Query Frame = 0

Query:   26 DDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 179
            +D VH PHY W   G FSS D A++RRG+QVYREVCA+CHS+ YI FR LVGVTHT    K +A + DV DGPND+GEM+ERPGKP DVIP PY N EA RAAN GA PPDLSLM KAR  G DY+FALLTGYC+PP GK +MPGL YNPYFPG
Sbjct:   38 EDVVHAPHYPWRHQGYFSSFDHAALRRGYQVYREVCASCHSLHYIRFRELVGVTHTKEEVKQMAMDVDVLDGPNDQGEMFERPGKPYDVIPSPYPNKEAGRAANGGAYPPDLSLMVKARHNGADYVFALLTGYCDPPAGKEMMPGLHYNPYFPG 191

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BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: A0A1E7EUH1_9STRA (Cytochrom_C1-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUH1_9STRA)

HSP 1 Score: 228 bits (581), Expect = 3.530e-72
Identity = 107/154 (69.48%), Postives = 119/154 (77.27%), Query Frame = 0

Query:   26 DDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 179
            DD VHPPHY W   G FSS D A++RRGFQVYR+VCA+CHS+QYI FR LVGVTHT    K +A++ DV DGPND GEM+ERPGKP DV+P PY N E  RAAN GA PPDLSLM KAR  G DY+ ALLTGYCE P GK +MPGL YNPYFPG
Sbjct:   41 DDVVHPPHYPWRHQGYFSSFDHAALRRGFQVYRQVCASCHSLQYIRFRELVGVTHTTQEVKDMAQDVDVLDGPNDIGEMFERPGKPYDVMPSPYPNKETGRAANGGAYPPDLSLMVKARHNGADYVMALLTGYCEAPAGKEMMPGLYYNPYFPG 194

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BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: A0A024GLL4_9STRA (Cytochrome c domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GLL4_9STRA)

HSP 1 Score: 227 bits (578), Expect = 6.120e-72
Identity = 107/157 (68.15%), Postives = 127/157 (80.89%), Query Frame = 0

Query:   23 DCSDDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 179
            +C+DDA+  P YG+   GP SS D AS+RRG+QVYREVCA+CHS++ I FRNLVGVTHT    KA+A + DVEDGPND+GEM++RPGK  D +P PY NDEAA AANNGA+PPDLSLM KAR GGVDY+FALLTGY +PPEGK ++ GL YNPYF G
Sbjct:   30 ECNDDALSIPDYGFDHKGPLSSFDYASVRRGYQVYREVCASCHSLERISFRNLVGVTHTEEQVKALAADVDVEDGPNDQGEMFDRPGKLSDPLPKPYPNDEAAAAANNGAIPPDLSLMVKARPGGVDYLFALLTGYVDPPEGKELLSGLYYNPYFSG 186

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BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: A0A4D9D0D3_9STRA (Cytochrome c domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0D3_9STRA)

HSP 1 Score: 226 bits (576), Expect = 1.790e-71
Identity = 115/174 (66.09%), Postives = 131/174 (75.29%), Query Frame = 0

Query:    6 LGAATVGIAVATAPQPADCSDDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 179
            +GA   G AVA     A CS D V    YGW   G  +S D  ++RRGFQVYREVCA+CH++++ +FRNLVGVTHT    K IAE YDV DGPN EGEM+ERPGK  D IPGPY N EAARAANNGA PPDLSL+TKAR GGVDY+FALLTGY +PPEGKA++ GL YNPYFPG
Sbjct:   27 MGALVAGTAVAGGV--AVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHTEEEVKKIAESYDVVDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARPGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPG 198

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BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: B8LDW8_THAPS (Cytochrome c1 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LDW8_THAPS)

HSP 1 Score: 224 bits (571), Expect = 8.750e-71
Identity = 107/171 (62.57%), Postives = 127/171 (74.27%), Query Frame = 0

Query:   10 TVGIAVATA-PQPADCSDDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 179
            T  +A++T  P    C D+ +H P Y W   G  SS D A++RRGFQVYR+VCATCHSI+ IH+R LVGVTHT      +A E DV DGPNDEGEM+ERPGK  D +P PY+N+E  R AN GA+PPDLSLM KAR  G DY+F+LLTGYC+PPEGKA+MPGL YNPYFPG
Sbjct:   23 TAALALSTLYPATTKCDDEILHAPSYPWDHLGLVSSYDCAALRRGFQVYRQVCATCHSIERIHYRELVGVTHTTEELVEMASEVDVVDGPNDEGEMFERPGKLTDALPSPYQNEEQGRLANGGALPPDLSLMVKARHAGQDYLFSLLTGYCDPPEGKAMMPGLYYNPYFPG 193

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BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: B3RJF4_TRIAD (Cytochrome c domain-containing protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RJF4_TRIAD)

HSP 1 Score: 222 bits (565), Expect = 2.780e-70
Identity = 104/155 (67.10%), Postives = 121/155 (78.06%), Query Frame = 0

Query:   25 SDDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 179
            +DD +HPPHY W  DG  SS D ASIRRG+QVY+EVC+ CHS+  I FRNLVGV+HT   AKA+AE  ++EDGPN++GEM+ RPGK  D  P PY+NDE ARAANNGA+PPDLSLM KAR GG DYMF+LLTGYC+PP G  V  GL YNPYF G
Sbjct:    6 ADDQLHPPHYPWSHDGILSSLDHASIRRGYQVYKEVCSACHSLDQIAFRNLVGVSHTEEEAKALAESVNIEDGPNEDGEMFLRPGKLSDYFPPPYKNDEEARAANNGALPPDLSLMNKARHGGEDYMFSLLTGYCDPPAGITVREGLSYNPYFTG 160

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BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: A0A7S4QTN0_9STRA (Hypothetical protein n=5 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S4QTN0_9STRA)

HSP 1 Score: 222 bits (566), Expect = 4.420e-70
Identity = 103/155 (66.45%), Postives = 118/155 (76.13%), Query Frame = 0

Query:   25 SDDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 179
            SDD VHPP + W   GPFSS D   +RRGFQVYR+VCATCHS++ IH+R LVGVTHT      +A E D  DGPNDEGEM+ERPGK  D +P PY N+EA RAAN GA+PPDLSLM KAR  G DY+F+LLTGYC+ P GK +MPGL YNPYFPG
Sbjct:   35 SDDVVHPPAHPWSHTGPFSSYDCGGLRRGFQVYRQVCATCHSLKQIHYRELVGVTHTTEELIEMASEVDFVDGPNDEGEMFERPGKLTDKLPSPYPNEEAGRAANGGALPPDLSLMVKARHSGQDYLFSLLTGYCDAPAGKPMMPGLYYNPYFPG 189

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BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: A0A6G0WRS4_9STRA (Cytochrome c domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRS4_9STRA)

HSP 1 Score: 220 bits (560), Expect = 3.590e-69
Identity = 105/155 (67.74%), Postives = 124/155 (80.00%), Query Frame = 0

Query:   25 SDDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 179
            SDD++   HYG+   GPF+S D A++RRG+QVY+EVC+TCHSI  IHFR+LVGVTHT A AK +AE+ +V DGPNDEGEM+ERPGK  D +P PY NDEAA AANNGA+PPDLSL+ KAR  G DY+FALLTGY EPPEGK +  GL YNPYF G
Sbjct:   35 SDDSIPALHYGFEHQGPFTSFDYAAVRRGYQVYKEVCSTCHSIDKIHFRHLVGVTHTEAEAKKLAEDIEVVDGPNDEGEMFERPGKLSDPLPKPYANDEAAAAANNGAIPPDLSLIVKARHAGADYLFALLTGYYEPPEGKELGNGLHYNPYFGG 189

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BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: A0A1X2HN30_SYNRA (Cytochrome C1 family-domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HN30_SYNRA)

HSP 1 Score: 219 bits (558), Expect = 1.790e-68
Identity = 99/158 (62.66%), Postives = 125/158 (79.11%), Query Frame = 0

Query:   22 ADCSDDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 179
            A+ +D+ +HPPHY WP  GP S+ D ASIRRG+QVYREVC+ CHS+  I +RNL+GV+HT    KA+AEE++ +DGP++ G+M++RPGKP D +P PY N+EAARA N GA+PPDLSL+TKAR GG DY+FALLTGY +PP G  V  GL YNPYFPG
Sbjct:   63 ANMADEGLHPPHYPWPHSGPLSTYDHASIRRGYQVYREVCSACHSLDRIAWRNLIGVSHTEEEVKAMAEEFEYQDGPDENGDMFDRPGKPSDYMPKPYANEEAARAGNAGALPPDLSLITKARHGGEDYVFALLTGYMDPPGGVEVREGLNYNPYFPG 220

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BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: W4G561_9STRA (Cytochrome c domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=W4G561_9STRA)

HSP 1 Score: 218 bits (555), Expect = 2.050e-68
Identity = 104/155 (67.10%), Postives = 123/155 (79.35%), Query Frame = 0

Query:   25 SDDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 179
            SDD++   HYG+  DGP +S D A++RRG+QVY+EVCATCHS+  IHFR+LVGVTHT A AKA+A + DVEDGPND+GE +ERPGK  D +P PY NDEAA AANNGA+PPDLSL+ KAR  G DY+FALLTGY E PEGK +  GL YNPYF G
Sbjct:   35 SDDSIPALHYGFEHDGPLTSFDYAAVRRGYQVYKEVCATCHSVDKIHFRHLVGVTHTEAEAKALAADIDVEDGPNDQGESFERPGKLSDPLPKPYANDEAAAAANNGAIPPDLSLIVKARHAGADYLFALLTGYVEAPEGKELGNGLYYNPYFGG 189

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot

BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A448ZSM7_9STRA	1.100e-72	69.48	Cytochrome c domain-containing protein n=1 Tax=Pse...	[more]
A0A1E7EUH1_9STRA	3.530e-72	69.48	Cytochrom_C1-domain-containing protein n=1 Tax=Fra...	[more]
A0A024GLL4_9STRA	6.120e-72	68.15	Cytochrome c domain-containing protein n=2 Tax=Alb...	[more]
A0A4D9D0D3_9STRA	1.790e-71	66.09	Cytochrome c domain-containing protein n=2 Tax=Mon...	[more]
B8LDW8_THAPS	8.750e-71	62.57	Cytochrome c1 n=1 Tax=Thalassiosira pseudonana Tax...	[more]
B3RJF4_TRIAD	2.780e-70	67.10	Cytochrome c domain-containing protein n=2 Tax=Tri...	[more]
A0A7S4QTN0_9STRA	4.420e-70	66.45	Hypothetical protein n=5 Tax=Lithodesmiaceae TaxID...	[more]
A0A6G0WRS4_9STRA	3.590e-69	67.74	Cytochrome c domain-containing protein n=1 Tax=Aph...	[more]
A0A1X2HN30_SYNRA	1.790e-68	62.66	Cytochrome C1 family-domain-containing protein n=1...	[more]
W4G561_9STRA	2.050e-68	67.10	Cytochrome c domain-containing protein n=2 Tax=Aph...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002326	Cytochrome c1	PRINTS	PR00603	CYTOCHROMEC1	coord: 99..119 score: 49.32 coord: 170..179 score: 54.76 coord: 34..53 score: 45.36 coord: 54..73 score: 54.64 coord: 132..156 score: 58.29
IPR002326	Cytochrome c1	PFAM	PF02167	Cytochrom_C1	coord: 36..179 e-value: 5.8E-61 score: 206.0
IPR002326	Cytochrome c1	PANTHER	PTHR10266	CYTOCHROME C1	coord: 6..179
IPR036909	Cytochrome c-like domain superfamily	GENE3D	1.10.760.10		coord: 25..179 e-value: 3.3E-62 score: 212.1
IPR036909	Cytochrome c-like domain superfamily	SUPERFAMILY	46626	Cytochrome c	coord: 28..179
None	No IPR available	PANTHER	PTHR10266:SF3	CYTOCHROME C1, HEME PROTEIN, MITOCHONDRIAL	coord: 6..179
IPR009056	Cytochrome c-like domain	PROSITE	PS51007	CYTC	coord: 48..179 score: 7.528635

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
C-australica_Contig_98	contig	C-australica_Contig_98:35711..36525 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Chrysoparadoxa australica CS_1217 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_C-australica_Contig_98.12.1	mRNA_C-australica_Contig_98.12.1	Chrysoparadoxa australica CS_1217	mRNA	C-australica_Contig_98 35709..36525 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_C-australica_Contig_98.12.1 ID=prot_C-australica_Contig_98.12.1|Name=mRNA_C-australica_Contig_98.12.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=179bp
ASAASLGAATVGIAVATAPQPADCSDDAVHPPHYGWPFDGPFSSQDTASI
RRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPND
EGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDY
MFALLTGYCEPPEGKAVMPGLQYNPYFPG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002326	Cyt_c1
IPR036909	Cyt_c-like_dom_sf
IPR009056	Cyt_c-like_dom