mRNA_C-australica_Contig_98.12.1 (mRNA) Chrysoparadoxa australica CS_1217
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Overview
Homology
BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: A0A448ZSM7_9STRA (Cytochrome c domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZSM7_9STRA) HSP 1 Score: 229 bits (584), Expect = 1.100e-72 Identity = 107/154 (69.48%), Postives = 120/154 (77.92%), Query Frame = 1
Query: 76 DDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 537
+D VH PHY W G FSS D A++RRG+QVYREVCA+CHS+ YI FR LVGVTHT K +A + DV DGPND+GEM+ERPGKP DVIP PY N EA RAAN GA PPDLSLM KAR G DY+FALLTGYC+PP GK +MPGL YNPYFPG
Sbjct: 38 EDVVHAPHYPWRHQGYFSSFDHAALRRGYQVYREVCASCHSLHYIRFRELVGVTHTKEEVKQMAMDVDVLDGPNDQGEMFERPGKPYDVIPSPYPNKEAGRAANGGAYPPDLSLMVKARHNGADYVFALLTGYCDPPAGKEMMPGLHYNPYFPG 191
BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: A0A1E7EUH1_9STRA (Cytochrom_C1-domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EUH1_9STRA) HSP 1 Score: 228 bits (581), Expect = 3.530e-72 Identity = 107/154 (69.48%), Postives = 119/154 (77.27%), Query Frame = 1
Query: 76 DDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 537
DD VHPPHY W G FSS D A++RRGFQVYR+VCA+CHS+QYI FR LVGVTHT K +A++ DV DGPND GEM+ERPGKP DV+P PY N E RAAN GA PPDLSLM KAR G DY+ ALLTGYCE P GK +MPGL YNPYFPG
Sbjct: 41 DDVVHPPHYPWRHQGYFSSFDHAALRRGFQVYRQVCASCHSLQYIRFRELVGVTHTTQEVKDMAQDVDVLDGPNDIGEMFERPGKPYDVMPSPYPNKETGRAANGGAYPPDLSLMVKARHNGADYVMALLTGYCEAPAGKEMMPGLYYNPYFPG 194
BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: A0A024GLL4_9STRA (Cytochrome c domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024GLL4_9STRA) HSP 1 Score: 227 bits (578), Expect = 6.120e-72 Identity = 107/157 (68.15%), Postives = 127/157 (80.89%), Query Frame = 1
Query: 67 DCSDDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 537
+C+DDA+ P YG+ GP SS D AS+RRG+QVYREVCA+CHS++ I FRNLVGVTHT KA+A + DVEDGPND+GEM++RPGK D +P PY NDEAA AANNGA+PPDLSLM KAR GGVDY+FALLTGY +PPEGK ++ GL YNPYF G
Sbjct: 30 ECNDDALSIPDYGFDHKGPLSSFDYASVRRGYQVYREVCASCHSLERISFRNLVGVTHTEEQVKALAADVDVEDGPNDQGEMFDRPGKLSDPLPKPYPNDEAAAAANNGAIPPDLSLMVKARPGGVDYLFALLTGYVDPPEGKELLSGLYYNPYFSG 186
BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: A0A4D9D0D3_9STRA (Cytochrome c domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D0D3_9STRA) HSP 1 Score: 226 bits (576), Expect = 1.790e-71 Identity = 115/174 (66.09%), Postives = 131/174 (75.29%), Query Frame = 1
Query: 16 LGAATVGIAVATAPQPADCSDDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 537
+GA G AVA A CS D V YGW G +S D ++RRGFQVYREVCA+CH++++ +FRNLVGVTHT K IAE YDV DGPN EGEM+ERPGK D IPGPY N EAARAANNGA PPDLSL+TKAR GGVDY+FALLTGY +PPEGKA++ GL YNPYFPG
Sbjct: 27 MGALVAGTAVAGGV--AVCSADHVPSIDYGWNHHGLLASYDYPAVRRGFQVYREVCASCHALEHTYFRNLVGVTHTEEEVKKIAESYDVVDGPNAEGEMFERPGKLSDKIPGPYANKEAARAANNGAYPPDLSLITKARPGGVDYIFALLTGYIDPPEGKAILSGLNYNPYFPG 198
BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: B8LDW8_THAPS (Cytochrome c1 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LDW8_THAPS) HSP 1 Score: 224 bits (571), Expect = 8.750e-71 Identity = 107/171 (62.57%), Postives = 127/171 (74.27%), Query Frame = 1
Query: 28 TVGIAVATA-PQPADCSDDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 537
T +A++T P C D+ +H P Y W G SS D A++RRGFQVYR+VCATCHSI+ IH+R LVGVTHT +A E DV DGPNDEGEM+ERPGK D +P PY+N+E R AN GA+PPDLSLM KAR G DY+F+LLTGYC+PPEGKA+MPGL YNPYFPG
Sbjct: 23 TAALALSTLYPATTKCDDEILHAPSYPWDHLGLVSSYDCAALRRGFQVYRQVCATCHSIERIHYRELVGVTHTTEELVEMASEVDVVDGPNDEGEMFERPGKLTDALPSPYQNEEQGRLANGGALPPDLSLMVKARHAGQDYLFSLLTGYCDPPEGKAMMPGLYYNPYFPG 193
BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: B3RJF4_TRIAD (Cytochrome c domain-containing protein n=2 Tax=Trichoplax TaxID=10227 RepID=B3RJF4_TRIAD) HSP 1 Score: 222 bits (565), Expect = 2.780e-70 Identity = 104/155 (67.10%), Postives = 121/155 (78.06%), Query Frame = 1
Query: 73 SDDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 537
+DD +HPPHY W DG SS D ASIRRG+QVY+EVC+ CHS+ I FRNLVGV+HT AKA+AE ++EDGPN++GEM+ RPGK D P PY+NDE ARAANNGA+PPDLSLM KAR GG DYMF+LLTGYC+PP G V GL YNPYF G
Sbjct: 6 ADDQLHPPHYPWSHDGILSSLDHASIRRGYQVYKEVCSACHSLDQIAFRNLVGVSHTEEEAKALAESVNIEDGPNEDGEMFLRPGKLSDYFPPPYKNDEEARAANNGALPPDLSLMNKARHGGEDYMFSLLTGYCDPPAGITVREGLSYNPYFTG 160
BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: A0A7S4QTN0_9STRA (Hypothetical protein n=5 Tax=Lithodesmiaceae TaxID=49247 RepID=A0A7S4QTN0_9STRA) HSP 1 Score: 222 bits (566), Expect = 4.420e-70 Identity = 103/155 (66.45%), Postives = 118/155 (76.13%), Query Frame = 1
Query: 73 SDDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 537
SDD VHPP + W GPFSS D +RRGFQVYR+VCATCHS++ IH+R LVGVTHT +A E D DGPNDEGEM+ERPGK D +P PY N+EA RAAN GA+PPDLSLM KAR G DY+F+LLTGYC+ P GK +MPGL YNPYFPG
Sbjct: 35 SDDVVHPPAHPWSHTGPFSSYDCGGLRRGFQVYRQVCATCHSLKQIHYRELVGVTHTTEELIEMASEVDFVDGPNDEGEMFERPGKLTDKLPSPYPNEEAGRAANGGALPPDLSLMVKARHSGQDYLFSLLTGYCDAPAGKPMMPGLYYNPYFPG 189
BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: A0A6G0WRS4_9STRA (Cytochrome c domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WRS4_9STRA) HSP 1 Score: 220 bits (560), Expect = 3.590e-69 Identity = 105/155 (67.74%), Postives = 124/155 (80.00%), Query Frame = 1
Query: 73 SDDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 537
SDD++ HYG+ GPF+S D A++RRG+QVY+EVC+TCHSI IHFR+LVGVTHT A AK +AE+ +V DGPNDEGEM+ERPGK D +P PY NDEAA AANNGA+PPDLSL+ KAR G DY+FALLTGY EPPEGK + GL YNPYF G
Sbjct: 35 SDDSIPALHYGFEHQGPFTSFDYAAVRRGYQVYKEVCSTCHSIDKIHFRHLVGVTHTEAEAKKLAEDIEVVDGPNDEGEMFERPGKLSDPLPKPYANDEAAAAANNGAIPPDLSLIVKARHAGADYLFALLTGYYEPPEGKELGNGLHYNPYFGG 189
BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: A0A1X2HN30_SYNRA (Cytochrome C1 family-domain-containing protein n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2HN30_SYNRA) HSP 1 Score: 219 bits (558), Expect = 1.790e-68 Identity = 99/158 (62.66%), Postives = 125/158 (79.11%), Query Frame = 1
Query: 64 ADCSDDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 537
A+ +D+ +HPPHY WP GP S+ D ASIRRG+QVYREVC+ CHS+ I +RNL+GV+HT KA+AEE++ +DGP++ G+M++RPGKP D +P PY N+EAARA N GA+PPDLSL+TKAR GG DY+FALLTGY +PP G V GL YNPYFPG
Sbjct: 63 ANMADEGLHPPHYPWPHSGPLSTYDHASIRRGYQVYREVCSACHSLDRIAWRNLIGVSHTEEEVKAMAEEFEYQDGPDENGDMFDRPGKPSDYMPKPYANEEAARAGNAGALPPDLSLITKARHGGEDYVFALLTGYMDPPGGVEVREGLNYNPYFPG 220
BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Match: W4G561_9STRA (Cytochrome c domain-containing protein n=2 Tax=Aphanomyces TaxID=100860 RepID=W4G561_9STRA) HSP 1 Score: 218 bits (555), Expect = 2.050e-68 Identity = 104/155 (67.10%), Postives = 123/155 (79.35%), Query Frame = 1
Query: 73 SDDAVHPPHYGWPFDGPFSSQDTASIRRGFQVYREVCATCHSIQYIHFRNLVGVTHTAAAAKAIAEEYDVEDGPNDEGEMYERPGKPVDVIPGPYRNDEAARAANNGAVPPDLSLMTKARDGGVDYMFALLTGYCEPPEGKAVMPGLQYNPYFPG 537
SDD++ HYG+ DGP +S D A++RRG+QVY+EVCATCHS+ IHFR+LVGVTHT A AKA+A + DVEDGPND+GE +ERPGK D +P PY NDEAA AANNGA+PPDLSL+ KAR G DY+FALLTGY E PEGK + GL YNPYF G
Sbjct: 35 SDDSIPALHYGFEHDGPLTSFDYAAVRRGYQVYKEVCATCHSVDKIHFRHLVGVTHTEAEAKALAADIDVEDGPNDQGESFERPGKLSDPLPKPYANDEAAAAANNGAIPPDLSLIVKARHAGADYLFALLTGYVEAPEGKELGNGLYYNPYFGG 189 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_98.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_98.12.1 >prot_C-australica_Contig_98.12.1 ID=prot_C-australica_Contig_98.12.1|Name=mRNA_C-australica_Contig_98.12.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=179bp ASAASLGAATVGIAVATAPQPADCSDDAVHPPHYGWPFDGPFSSQDTASIback to top mRNA from alignment at C-australica_Contig_98:35709..36525- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_98.12.1 ID=mRNA_C-australica_Contig_98.12.1|Name=mRNA_C-australica_Contig_98.12.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=817bp|location=Sequence derived from alignment at C-australica_Contig_98:35709..36525- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_98:35709..36525- >mRNA_C-australica_Contig_98.12.1 ID=mRNA_C-australica_Contig_98.12.1|Name=mRNA_C-australica_Contig_98.12.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=537bp|location=Sequence derived from alignment at C-australica_Contig_98:35709..36525- (Chrysoparadoxa australica CS_1217)back to top |