prot_C-australica_Contig_976.4.2 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_976.4.2
Unique Nameprot_C-australica_Contig_976.4.2
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length290
Homology
BLAST of mRNA_C-australica_Contig_976.4.2 vs. uniprot
Match: A0A534TJB4_9DELT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534TJB4_9DELT)

HSP 1 Score: 88.2 bits (217), Expect = 3.060e-17
Identity = 56/139 (40.29%), Postives = 71/139 (51.08%), Query Frame = 0
Query:   93 GKPKPEIVPKQGGYSPAEIAALEPAGSEKAYFAVGCYWGGEANFRSVPGVTSTRVGFMGGKQRNPDYEHIGD----HLEVVEVVYTGGPTVYRNLLNVAARTYDFV-------DWGHRYERGIFTTSEDQYKLASASGE 220
            G+ +P  VP Q     A +    P GSE+A FA+GC+WG E  F +V GV +T VG+ GG  +NP Y  +      H EVV VVY      Y +LL V    +D         D G +Y   I+TTSE Q K A AS E
Sbjct:   18 GRDEPVRVPPQHVVLGAPLLPPFPDGSERAIFAMGCFWGAERKFWNVDGVYTTAVGYAGGFTKNPTYREVCSGQTGHAEVVLVVYDPKRVTYADLLRVFWENHDPTQGMRQGNDVGTQYRSAIYTTSEAQKKAAEASRE 156          
BLAST of mRNA_C-australica_Contig_976.4.2 vs. uniprot
Match: A0A2V7WZ83_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V7WZ83_9BACT)

HSP 1 Score: 86.7 bits (213), Expect = 3.130e-17
Identity = 47/110 (42.73%), Postives = 58/110 (52.73%), Query Frame = 0
Query:  120 EKAYFAVGCYWGGEANFRSVPGVTSTRVGFMGGKQRNPDYEHI----GDHLEVVEVVYTGGPTVYRNLLNVAARTYDFV-------DWGHRYERGIFTTSEDQYKLASAS 218
            +KA FA GC+WG EA FR +PGV STRVG++GGK  NP Y+ +      H E VEV +      Y  LL V    +D         DWG +Y   IF  S +Q   A AS
Sbjct:    2 QKATFAAGCFWGVEATFRQIPGVISTRVGYIGGKTENPTYKEVCTDGTGHAEAVEVEFDPSKVAYNELLQVFWENHDPTQVNRQGPDWGTQYRTAIFFHSPEQQAQAEAS 111          
BLAST of mRNA_C-australica_Contig_976.4.2 vs. uniprot
Match: A0A2V9Y6E8_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9Y6E8_9BACT)

HSP 1 Score: 86.7 bits (213), Expect = 3.130e-17
Identity = 49/112 (43.75%), Postives = 60/112 (53.57%), Query Frame = 0
Query:  120 EKAYFAVGCYWGGEANFRSVPGVTSTRVGFMGGKQRNPDYEHI----GDHLEVVEVVYTGGPTVYRNLLNVAARTYDFV-------DWGHRYERGIFTTSEDQYKLASASGE 220
            EKA FA GC+WG EA FR +PGVTSTRVG++GG   NP Y+ +      H E VEV +      Y +LL V    +D         DWG +Y   IF  S +Q   A AS E
Sbjct:    2 EKATFAAGCFWGVEATFRQLPGVTSTRVGYIGGHTENPSYKEVCTDRTGHAEAVEVEFDPAKIPYTDLLKVFWENHDPTQVNRQGPDWGTQYRTAIFFHSPEQQAQALASKE 113          
BLAST of mRNA_C-australica_Contig_976.4.2 vs. uniprot
Match: UPI001FCD94F4 (peptide-methionine (S)-S-oxide reductase MsrA n=1 Tax=Micromonospora echinofusca TaxID=47858 RepID=UPI001FCD94F4)

HSP 1 Score: 87.0 bits (214), Expect = 8.350e-17
Identity = 50/127 (39.37%), Postives = 70/127 (55.12%), Query Frame = 0
Query:  116 PAGSEKAYFAVGCYWGGEANFRSVPGVTSTRVGFMGGKQRNPDYEHIGD----HLEVVEVVYTGGPTVYRNLLNVAARTYDFV-------DWGHRYERGIFTTSEDQYKLASASGEGWSGTPVVRTT 231
            P GS+ A F +GC+WG E  F ++PGV +T VG+ GG  +NP YE +      H EVV+VVY      Y +LL V    +D         D G +Y   I+TT+++Q   A AS E ++  P+VR T
Sbjct:   37 PTGSQVAVFGMGCFWGAERLFWTLPGVITTSVGYAGGFTQNPTYEEVCSGLTGHTEVVQVVYDPARIAYEDLLKVFWENHDPTQGMRQGNDVGTQYRSAIYTTTDEQAAAARASREAFN--PIVRAT 161          
BLAST of mRNA_C-australica_Contig_976.4.2 vs. uniprot
Match: A0A2V9QZN2_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9QZN2_9BACT)

HSP 1 Score: 83.6 bits (205), Expect = 4.310e-16
Identity = 47/109 (43.12%), Postives = 59/109 (54.13%), Query Frame = 0
Query:  121 KAYFAVGCYWGGEANFRSVPGVTSTRVGFMGGKQRNPDYEHI----GDHLEVVEVVYTGGPTVYRNLLNVAARTYDFV-------DWGHRYERGIFTTSEDQYKLASAS 218
            KA FA GC+WG EA FR +PGVT TRVG+ GG+ +NP Y+ +      H E VEV Y      Y  LLNV    +D         D+G +Y   IF  S +Q + A AS
Sbjct:    3 KATFAAGCFWGVEATFRQIPGVTGTRVGYTGGEMKNPTYKDVCTDRTGHAEAVEVDYDPAKVSYEALLNVFWENHDPTQLNRQGPDFGTQYRSAIFYHSPEQEQAAHAS 111          
BLAST of mRNA_C-australica_Contig_976.4.2 vs. uniprot
Match: A0A1N7E0T0_9EURY (Peptide-methionine (S)-S-oxide reductase n=1 Tax=Natronorubrum thiooxidans TaxID=308853 RepID=A0A1N7E0T0_9EURY)

HSP 1 Score: 84.7 bits (208), Expect = 6.820e-16
Identity = 42/103 (40.78%), Postives = 62/103 (60.19%), Query Frame = 0
Query:  116 PAGSEKAYFAVGCYWGGEANFRSVPGVTSTRVGFMGGKQRNPDYEHIGDHLEVVEVVYTGGPTVYRNLLNVAARTYDFVDWGHRYE-RGIFTTSED-QYKLAS 216
            P+ +E A F +GC+WG +A F ++ GV  TRVG+ GG   NP Y  +GDH EVV+VVY  G   Y  LL      +D+    H+ + RG+  T +D Q+++A+
Sbjct:   23 PSETETATFGMGCFWGPDARFGAMEGVVRTRVGYAGGTTPNPRYYSLGDHTEVVQVVYDPGTVTYDELLEDCWANHDWTSTAHKRQYRGVILTHDDHQHEVAT 125          
BLAST of mRNA_C-australica_Contig_976.4.2 vs. uniprot
Match: A0A2V9LLL8_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9LLL8_9BACT)

HSP 1 Score: 82.8 bits (203), Expect = 8.560e-16
Identity = 48/112 (42.86%), Postives = 59/112 (52.68%), Query Frame = 0
Query:  120 EKAYFAVGCYWGGEANFRSVPGVTSTRVGFMGGKQRNPDYEHI----GDHLEVVEVVYTGGPTVYRNLLNVAARTYDFV-------DWGHRYERGIFTTSEDQYKLASASGE 220
            EKA FA GC+WG EA FR VPGVT+T VG+ GGK +NP Y+ +      H E VEV +      Y  LL V  + +D         D G +Y   IFT   +Q   A AS E
Sbjct:    2 EKATFAAGCFWGVEAAFRQVPGVTATSVGYTGGKLKNPSYQDVCTDRTGHAEAVEVQFEPSKVTYEQLLEVFWQCHDPTTLDRQGPDVGTQYRSAIFTHDAEQEAAARASKE 113          
BLAST of mRNA_C-australica_Contig_976.4.2 vs. uniprot
Match: A0A2V9NI39_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9NI39_9BACT)

HSP 1 Score: 82.0 bits (201), Expect = 1.650e-15
Identity = 46/109 (42.20%), Postives = 61/109 (55.96%), Query Frame = 0
Query:  121 KAYFAVGCYWGGEANFRSVPGVTSTRVGFMGGKQRNPDYEHI----GDHLEVVEVVYTGGPTVYRNLLNVAARTYD-------FVDWGHRYERGIFTTSEDQYKLASAS 218
            KA FA GC+WG EA FR +PGVT+TRVG++GG  ++P Y+ +      H E VEV Y      Y +LLNV    +D         D+G +Y   IF  S +Q + A AS
Sbjct:    3 KATFAAGCFWGVEATFRQIPGVTATRVGYIGGNLKDPTYKDVCTDSTGHAEAVEVEYDPAKVSYGDLLNVFWENHDPSQLNRQGPDFGTQYRSAIFYHSPEQEQAARAS 111          
BLAST of mRNA_C-australica_Contig_976.4.2 vs. uniprot
Match: A0A2V9WQI0_9BACT (Peptide methionine sulfoxide reductase MsrA n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9WQI0_9BACT)

HSP 1 Score: 82.0 bits (201), Expect = 1.700e-15
Identity = 46/111 (41.44%), Postives = 59/111 (53.15%), Query Frame = 0
Query:  121 KAYFAVGCYWGGEANFRSVPGVTSTRVGFMGGKQRNPDYEHI----GDHLEVVEVVYTGGPTVYRNLLNVAARTYDFV-------DWGHRYERGIFTTSEDQYKLASASGE 220
            KA FA GC+WG EA FR +PGV STRVG++GG+  NP Y+ +      H E VEV Y      Y  L+ V    +D         DWG +Y   IF  + +Q   A+AS E
Sbjct:    3 KATFAAGCFWGVEATFRQIPGVISTRVGYIGGRTDNPTYKEVCTDRTGHAEAVEVEYDPAKVSYDALVKVFWENHDPTQLNRQGPDWGTQYRSAIFFHTPEQKGAAAASKE 113          
BLAST of mRNA_C-australica_Contig_976.4.2 vs. uniprot
Match: A0A0M2S4Z8_9ACTN (Peptide methionine sulfoxide reductase MsrA n=58 Tax=Micromonosporaceae TaxID=28056 RepID=A0A0M2S4Z8_9ACTN)

HSP 1 Score: 83.6 bits (205), Expect = 1.740e-15
Identity = 47/132 (35.61%), Postives = 71/132 (53.79%), Query Frame = 0
Query:  108 PAEIAALEPAGSEKAYFAVGCYWGGEANFRSVPGVTSTRVGFMGGKQRNPDYEHIGD----HLEVVEVVYTGGPTVYRNLLNVAARTYDFV-------DWGHRYERGIFTTSEDQYKLASASGEGWSGTPVV 228
            P+ +    PAG++ A F +GC+WG E  F ++PGV +T  G+ GG   NP YE +      H EVV+VVY      Y +LL V    +D         D G +Y   I+TT+++Q  +A AS + ++  P+V
Sbjct:   34 PSSLTGPFPAGAQVAVFGMGCFWGAERLFWTLPGVITTSAGYAGGYTPNPTYEEVCSGLTGHAEVVQVVYDPTKIAYEDLLKVFWENHDPTQGLRQGNDVGSQYRSAIYTTTDEQLAVAQASRDAFA--PIV 163          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_976.4.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A534TJB4_9DELT3.060e-1740.29Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A2V7WZ83_9BACT3.130e-1742.73Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A2V9Y6E8_9BACT3.130e-1743.75Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
UPI001FCD94F48.350e-1739.37peptide-methionine (S)-S-oxide reductase MsrA n=1 ... [more]
A0A2V9QZN2_9BACT4.310e-1643.12Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A1N7E0T0_9EURY6.820e-1640.78Peptide-methionine (S)-S-oxide reductase n=1 Tax=N... [more]
A0A2V9LLL8_9BACT8.560e-1642.86Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A2V9NI39_9BACT1.650e-1542.20Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A2V9WQI0_9BACT1.700e-1541.44Peptide methionine sulfoxide reductase MsrA n=1 Ta... [more]
A0A0M2S4Z8_9ACTN1.740e-1535.61Peptide methionine sulfoxide reductase MsrA n=58 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002569Peptide methionine sulphoxide reductase MsrA domainPFAMPF01625PMSRcoord: 121..225
e-value: 1.5E-21
score: 77.2
IPR036509Peptide methionine sulphoxide reductase MsrA superfamilyGENE3D3.30.1060.10Peptide methionine sulphoxide reductase MsrAcoord: 116..240
e-value: 1.4E-29
score: 105.2
IPR036509Peptide methionine sulphoxide reductase MsrA superfamilySUPERFAMILY55068Peptide methionine sulfoxide reductasecoord: 114..225
NoneNo IPR availablePANTHERPTHR42799:SF13PEPTIDE METHIONINE SULFOXIDE REDUCTASEcoord: 118..220
NoneNo IPR availablePANTHERPTHR42799MITOCHONDRIAL PEPTIDE METHIONINE SULFOXIDE REDUCTASEcoord: 118..220

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_976contigC-australica_Contig_976:8827..10068 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_976.4.2mRNA_C-australica_Contig_976.4.2Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_976 8299..10115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_976.4.2 ID=prot_C-australica_Contig_976.4.2|Name=mRNA_C-australica_Contig_976.4.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=290bp
MRYSAGELLAAMSLMSSYSFSLAFLCHTPCSMSLEEPRSSAQTRRDVLIT
GLSALGASVVAPAFAGAAEEPKQGEGAMLLYDLYEDIKGDVTGKPKPEIV
PKQGGYSPAEIAALEPAGSEKAYFAVGCYWGGEANFRSVPGVTSTRVGFM
GGKQRNPDYEHIGDHLEVVEVVYTGGPTVYRNLLNVAARTYDFVDWGHRY
ERGIFTTSEDQYKLASASGEGWSGTPVVRTTQNIYFNVTVTHAVYPHLCV
SAPTPISLFRPPHPQSPSLMLWQLLVFSCKPSLISSIIR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002569Met_Sox_Rdtase_MsrA_dom
IPR036509Met_Sox_Rdtase_MsrA_sf