prot_C-australica_Contig_1031.1.3 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1031.1.3
Unique Nameprot_C-australica_Contig_1031.1.3
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length332
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1031.1.3 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 206..229
e-value: 18.0
score: 11.3
coord: 255..278
e-value: 32.0
score: 9.1
coord: 113..138
e-value: 110.0
score: 4.6
coord: 69..91
e-value: 38.0
score: 8.5
coord: 162..186
e-value: 290.0
score: 1.3
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 116..175
e-value: 2.2E-10
score: 40.1
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 116..183
e-value: 3.4E-18
score: 67.7
coord: 21..115
e-value: 1.4E-11
score: 46.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 184..315
e-value: 5.2E-31
score: 109.5
NoneNo IPR availablePANTHERPTHR48005:SF10LEUCINE-RICH REPEAT RECEPTOR-LIKE TYROSINE-PROTEIN KINASE PXC3 ISOFORM X1coord: 34..141
coord: 116..309
coord: 73..249
NoneNo IPR availablePANTHERPTHR48005LEUCINE RICH REPEAT KINASE 2coord: 116..309
NoneNo IPR availablePANTHERPTHR48005LEUCINE RICH REPEAT KINASE 2coord: 34..141
coord: 73..249
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 33..307

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1031contigC-australica_Contig_1031:372..2934 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1031.1.3mRNA_C-australica_Contig_1031.1.3Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1031 119..3080 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1031.1.3 ID=prot_C-australica_Contig_1031.1.3|Name=mRNA_C-australica_Contig_1031.1.3|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=332bp
MLFEGLAGPRWKEKKGWLGRAGTPNQRGVEPFSCHPSLWTGVSTDMGHIT
ALHLANLGAEGKVKGLEPLLHLISLDLSWNQVHEIPMAIAMLKRLEILKI
SAAGMRGPLPKSLPISLRELDLRHNSLEGEIPEAILKCKKLSVLNLGQNC
FTGGIPGAIGQLVSLRELRLSCNLLTGAIPPLPLNLQILDLSRNKLDGSF
PKVGELAKLRELRMSNNQLTGTLTGVGLGELTTLVMLYAADNRLRGPLPP
ELFSLKELRFLNLQRNHLEGAVPATIGNLDKLVALVLCGNKLVSPLPSTL
ARLSKLSDMAILSGTPSRMAGVKRGFTKHGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf