prot_C-australica_Contig_1029.2.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1029.2.1
Unique Nameprot_C-australica_Contig_1029.2.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length94
Homology
BLAST of mRNA_C-australica_Contig_1029.2.1 vs. uniprot
Match: A0A835ZCY0_9STRA (40S ribosomal protein S25 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY0_9STRA)

HSP 1 Score: 137 bits (345), Expect = 3.640e-40
Identity = 72/92 (78.26%), Postives = 80/92 (86.96%), Query Frame = 0
Query:    1 MAGGKGRKKKWSKQKNRDKMANEVLFKELTYNRLTTEVPKMKLITASALVERLKISGSLARSAIRELEEKGLIRVVSRHRAQLIYTRATNTD 92
            MAGGK RKKKWSK K RDK+ NEVLFKE TY R+  EVPKMKL+T SALVERLKI+GSLAR+AIRELEEKG+IR VS H AQL+YTRATNT+
Sbjct:   18 MAGGKSRKKKWSKNKARDKILNEVLFKEPTYERMMNEVPKMKLVTTSALVERLKINGSLARAAIRELEEKGVIRRVSHHSAQLVYTRATNTE 109          
BLAST of mRNA_C-australica_Contig_1029.2.1 vs. uniprot
Match: D8LTW6_ECTSI (40S ribosomal protein S25 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTW6_ECTSI)

HSP 1 Score: 133 bits (335), Expect = 1.220e-38
Identity = 71/93 (76.34%), Postives = 79/93 (84.95%), Query Frame = 0
Query:    1 MAGGKGRKKKWSKQKNRDKMANEVLFKELTYNRLTTEVPKMKLITASALVERLKISGSLARSAIRELEEKGLIRVVSRHRAQLIYTRATNTDE 93
            MAGGKGRKKKWSK K R+K+AN+VLF E TY R   EVPKMKLITAS LVERLK++GSLAR+AIRELEEKGLIR V  H AQ+IYTRATN +E
Sbjct:   18 MAGGKGRKKKWSKGKVREKVANQVLFNEDTYTRCLAEVPKMKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVEE 110          
BLAST of mRNA_C-australica_Contig_1029.2.1 vs. uniprot
Match: W7TVF9_9STRA (40S ribosomal protein S25 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVF9_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.090e-32
Identity = 66/94 (70.21%), Postives = 78/94 (82.98%), Query Frame = 0
Query:    1 MAGGKGRKKKWSKQKNRDKMANEVLFKELTY-NRLTTEVPKMKLITASALVERLKISGSLARSAIRELEEKGLIRVVSRHRAQLIYTRATNTDE 93
            MAGGK +KKKWSK K R+K+AN+VLF E  Y NRL TE+PK KLIT SALVERLKI+GSLAR+A+REL+EKGLI+ VS H +Q+IYTRAT   E
Sbjct:   18 MAGGKSKKKKWSKGKMREKVANKVLFDEEMYTNRLLTEIPKSKLITPSALVERLKINGSLARAALRELKEKGLIKPVSVHHSQIIYTRATAAAE 111          
BLAST of mRNA_C-australica_Contig_1029.2.1 vs. uniprot
Match: A0A7S3Y488_HETAK (40S ribosomal protein S25 n=2 Tax=Sar TaxID=2698737 RepID=A0A7S3Y488_HETAK)

HSP 1 Score: 117 bits (294), Expect = 3.120e-32
Identity = 62/93 (66.67%), Postives = 76/93 (81.72%), Query Frame = 0
Query:    1 MAGGKGRKKKWSKQKNRDKMANEVLFKELTYNRLTTEVPKMKLITASALVERLKISGSLARSAIRELEEKGLIRVVSRHRAQLIYTRATNTDE 93
            +AGGK RKKKWSK K R+KMAN+VL+ E TY RL TE+PKMKLIT SALVERLK++G+LAR+++ EL EKGLI+ V+RH +Q IYTR T   E
Sbjct:   30 LAGGKSRKKKWSKGKVREKMANKVLYDEDTYERLLTEIPKMKLITPSALVERLKVNGALARASLLELHEKGLIKEVARHGSQQIYTRTTGDAE 122          
BLAST of mRNA_C-australica_Contig_1029.2.1 vs. uniprot
Match: F0YAB4_AURAN (40S ribosomal protein S25 n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0YAB4_AURAN)

HSP 1 Score: 117 bits (292), Expect = 4.160e-32
Identity = 62/92 (67.39%), Postives = 75/92 (81.52%), Query Frame = 0
Query:    1 MAGGKGRKKKWSKQKNRDKMANEVLFKELTYNRLTTEVPKMKLITASALVERLKISGSLARSAIRELEEKGLIRVVSRHRAQLIYTRATNTD 92
            MAGGK +KKKWSK K R+KMAN+VLF E TY RL  E+PKMKLIT SALVERLK++G+LAR+AI+EL+EKGLI+ VS H  Q I+TR   +D
Sbjct:   18 MAGGKSKKKKWSKGKVREKMANKVLFDEDTYARLLAEIPKMKLITPSALVERLKVNGALARAAIKELQEKGLIKQVSYHHTQWIFTRDVGSD 109          
BLAST of mRNA_C-australica_Contig_1029.2.1 vs. uniprot
Match: A0A7S2G994_9STRA (40S ribosomal protein S25 n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G994_9STRA)

HSP 1 Score: 115 bits (289), Expect = 1.230e-31
Identity = 62/92 (67.39%), Postives = 76/92 (82.61%), Query Frame = 0
Query:    1 MAGGKGRKKKWSKQKNRDKMANEVLFKELTYNRLTTEVPKMKLITASALVERLKISGSLARSAIRELEEKGLIRVVSRHRAQLIYTRATNTD 92
            MAGGKG+KKKWSK K R+K+AN+VLF+E  Y RL TEVPKMKLIT SALVERLKI GSLAR+AI+ELE + +I+ +S H +Q +YTRAT  +
Sbjct:   18 MAGGKGKKKKWSKGKVREKVANKVLFEEELYERLKTEVPKMKLITPSALVERLKIGGSLARAAIKELESEEMIKRLSYHSSQWVYTRATAVE 109          
BLAST of mRNA_C-australica_Contig_1029.2.1 vs. uniprot
Match: A0A7S3PJ15_9STRA (40S ribosomal protein S25 n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PJ15_9STRA)

HSP 1 Score: 113 bits (282), Expect = 1.340e-30
Identity = 64/91 (70.33%), Postives = 73/91 (80.22%), Query Frame = 0
Query:    1 MAGG-KGRKKKWSKQKNRDKMANEVLFKELTYNRLTTEVPKMKLITASALVERLKISGSLARSAIRELEEKGLIRVVSRHRAQLIYTRATN 90
            MAGG KG+KKKWSK KNR+K  N VLF + +Y RL T+V KMKLIT S +VERLK++GSLAR+AIRELE KGLIR V  HR Q IYTRATN
Sbjct:   17 MAGGAKGKKKKWSKGKNREKALNLVLFDKPSYERLLTDVTKMKLITPSTIVERLKVTGSLARAAIRELEGKGLIREVLNHRKQRIYTRATN 107          
BLAST of mRNA_C-australica_Contig_1029.2.1 vs. uniprot
Match: B8CCQ5_THAPS (40S ribosomal protein S25 n=2 Tax=Sar TaxID=2698737 RepID=B8CCQ5_THAPS)

HSP 1 Score: 110 bits (276), Expect = 1.240e-29
Identity = 59/93 (63.44%), Postives = 75/93 (80.65%), Query Frame = 0
Query:    1 MAGGKGRKKKWSKQKNRDKMANEVLFKELTYNRLTTEVPKMKLITASALVERLKISGSLARSAIRELEEKGLIRVVSRHRAQLIYTRATNTDE 93
            MAGGKG+KKKWSK K RDK+ N+VLF +  ++RL +EVPKMKLIT S++VE+LKISG LAR A+ +L E+G+IR VS  RAQ IYTR+ N +E
Sbjct:   18 MAGGKGKKKKWSKGKQRDKVDNKVLFTKEQHDRLNSEVPKMKLITVSSVVEKLKISGGLARRALNQLAEEGVIRPVSVSRAQRIYTRSINDEE 110          
BLAST of mRNA_C-australica_Contig_1029.2.1 vs. uniprot
Match: A0A485LJ93_9STRA (40S ribosomal protein S25 n=7 Tax=Aphanomyces TaxID=100860 RepID=A0A485LJ93_9STRA)

HSP 1 Score: 110 bits (275), Expect = 1.660e-29
Identity = 58/93 (62.37%), Postives = 77/93 (82.80%), Query Frame = 0
Query:    1 MAGGKGR-KKKWSKQKNRDKMANEVLFKELTYNRLTTEVPKMKLITASALVERLKISGSLARSAIRELEEKGLIRVVSRHRAQLIYTRATNTD 92
            +AGG+G+ KKKWSK K R+K AN+VLF + TY R+  EVPKMKLITASA+VERLK++ +LAR+AI ELE+KG I+ V++HR Q+IYTR+  +D
Sbjct:   18 LAGGRGKGKKKWSKGKVREKTANKVLFDQETYERMCKEVPKMKLITASAVVERLKVNATLARAAILELEQKGEIKCVTKHRCQMIYTRSVGSD 110          
BLAST of mRNA_C-australica_Contig_1029.2.1 vs. uniprot
Match: UPI001FB10C90 (40S ribosomal protein S25-2-like n=1 Tax=Impatiens glandulifera TaxID=253017 RepID=UPI001FB10C90)

HSP 1 Score: 108 bits (270), Expect = 9.000e-29
Identity = 56/90 (62.22%), Postives = 71/90 (78.89%), Query Frame = 0
Query:    3 GGKGRKKKWSKQKNRDKMANEVLFKELTYNRLTTEVPKMKLITASALVERLKISGSLARSAIRELEEKGLIRVVSRHRAQLIYTRATNTD 92
            GGK +KKKWSK K ++K+ N VLF + TY++L TE PK KL+T S L +RL+++GSLAR AI+EL EKGLIR+VS H +Q IYTRATNT 
Sbjct:   19 GGKQKKKKWSKGKQKEKVNNMVLFDKATYDKLLTEAPKFKLVTPSILSDRLRVNGSLARKAIKELMEKGLIRLVSSHSSQQIYTRATNTQ 108          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1029.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZCY0_9STRA3.640e-4078.2640S ribosomal protein S25 n=2 Tax=Tribonema minus ... [more]
D8LTW6_ECTSI1.220e-3876.3440S ribosomal protein S25 n=2 Tax=Ectocarpus TaxID... [more]
W7TVF9_9STRA1.090e-3270.2140S ribosomal protein S25 n=2 Tax=Monodopsidaceae ... [more]
A0A7S3Y488_HETAK3.120e-3266.6740S ribosomal protein S25 n=2 Tax=Sar TaxID=269873... [more]
F0YAB4_AURAN4.160e-3267.3940S ribosomal protein S25 n=2 Tax=Pelagomonadales ... [more]
A0A7S2G994_9STRA1.230e-3167.3940S ribosomal protein S25 n=1 Tax=Florenciella par... [more]
A0A7S3PJ15_9STRA1.340e-3070.3340S ribosomal protein S25 n=1 Tax=Aplanochytrium s... [more]
B8CCQ5_THAPS1.240e-2963.4440S ribosomal protein S25 n=2 Tax=Sar TaxID=269873... [more]
A0A485LJ93_9STRA1.660e-2962.3740S ribosomal protein S25 n=7 Tax=Aphanomyces TaxI... [more]
UPI001FB10C909.000e-2962.2240S ribosomal protein S25-2-like n=1 Tax=Impatiens... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.63.20coord: 4..93
e-value: 3.3E-35
score: 122.0
NoneNo IPR availablePANTHERPTHR12850:SF540S RIBOSOMAL PROTEIN S25coord: 2..90
IPR004977Ribosomal protein S25PFAMPF03297Ribosomal_S25coord: 2..88
e-value: 1.1E-36
score: 125.1
IPR004977Ribosomal protein S25PANTHERPTHR1285040S RIBOSOMAL PROTEIN S25coord: 2..90
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 44..85

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1029contigC-australica_Contig_1029:2014..2886 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1029.2.1mRNA_C-australica_Contig_1029.2.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1029 1368..3582 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1029.2.1 ID=prot_C-australica_Contig_1029.2.1|Name=mRNA_C-australica_Contig_1029.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=94bp
MAGGKGRKKKWSKQKNRDKMANEVLFKELTYNRLTTEVPKMKLITASALV
ERLKISGSLARSAIRELEEKGLIRVVSRHRAQLIYTRATNTDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004977Ribosomal_S25
IPR036390WH_DNA-bd_sf