prot_C-australica_Contig_1028.3.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1028.3.1
Unique Nameprot_C-australica_Contig_1028.3.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length1738
Homology
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI)

HSP 1 Score: 459 bits (1182), Expect = 3.400e-129
Identity = 331/1019 (32.48%), Postives = 491/1019 (48.18%), Query Frame = 0
Query:  531 LSLYDIWQRIAGGWYDVTQPKAWLDPSAETTQ-NKGHAGVMDDINALVNAEHTIWGPASAIAEQARAVQEAFTELYEDKVLGRLQQLAK---AEAA------------------------DSELPSKASDVNFNMKDWREVAWWMGCREYAQWPVALRIMVLGWLCDEVLSTNSVRELVDRVVEAREVVAKQDKEMPRIVKRMMKEQGERRRHRMYYGDVEAPIGPDGQPIPLEEPRTYTEKEMLQRALQEEPYDIQVARKLATIAVRMVPVGQDRDYRRYWLLDRKCDEHIYVECEGSWACLSTADEVKAVYEWLDRRGKRERALKNALREYLVDHMRVTEEELCAI----------------------------------DASEEIEHGISMRDSWENKEEEG--QIESQGVDSATQESAMFQVCSTTRVEPLHLSNYDGRLYH---KGWVMLDLNVTMGPQGLGLVLNVHNSAVVVQ---KKDDSSSSPAMRAGVMKGDHVVQVNGIIAKAPQQLATAIKSAGLSSDGQVLTLTLLREVELTTSSTGEPGQGLLLYSPLQNLQGVLLKREGQLSHPYAIGEGWTAKRF-DWRAGVVTA-------------------TATAAVKVAESKEE----------GNGNTIGEPSV--------------------SAVQALRQRVLELELALVKQSTVLAATWTDPAVRQRIKWCHYVERARTASQLLVALGALEEVIDWDSIDEVWKGLDRKAFLEKIPEERRKYLPSKGDKVVYYGIVHGKAAKQDRDMKLKAMWGGCKPMIGQIMECKVVSIEYHAGGQRKPTRSNKSQDVQYYPFVKVELERISPPEGMELPVSICLKPAVKPSARLNRLLRRSIAAMRRLDGVDTFMTPVNPTIYPDYHDIISDPMDLGTMWDRCGDNYYGSLVQFRNDLVLVCNNCRRYCYRRFPNLPETCDTIVSDGLAYLERAGVARQIAEAEGHINDMESLWQEHMSVCIVQAASAGTLADAERLASQLG 1429
            L L  I +R   GWYD+ +P A  +P  E+     GHAGV  D+  +        G  SAI EQAR V + F  LYE  VL  L +L K     AA                        DSE   + +       D  E+   MG  EY +W  A R   L WLCDE LS  ++ +LV RV EA+EVV ++D+E+   V++ +++Q E    R ++                   R  TE EM+   +  E  D++  R+L ++ VR+ P+G DRD RRYWL     D  ++VE    W C +   ++KA+++WLDRRG RER LK ALRE+L+ ++ V+ +EL  +                                  D  + +     +    E +   G   + S G  +  Q  A+ ++CS+  V+ LH     G  +     GWVM DL V MGP GLGL L+V +  VVV    +     S+P   AGV  GD +V V+ I+A+ P++LA  +K  GLS  G+++ + +L +V L T   GEP Q  L Y+ +  ++G LL+ E +L H + +G GW  +   +WR GV  A                      A     E K++          G+G    E S+                    +AV+ L +R+L +E  + KQ TV+ A W++    +R KW  +V  A+TA QLL A GA ++VIDW +    +  LDR+ FL  +P   R  +P KGD+V+YYG  H  + + +     + +WG   P  G + +  V SI YH GG      S +++  Q  PF  +ELE    P   E    + L P  +P  +LNRLL++++ AMR    V  F+ PV+ TIYPDY+D+IS+PMDL  +W RC    Y S+ +F+ +L LV +NCR YC  +FP LP   D  V+ G+  L+   +A ++ +       +E+LW +HMS  I  +    T+   ++LA QLG
Sbjct:  870 LDLGTILRRAENGWYDL-EPGA--EPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSAAXXXXXXXXGRGGLEEGRVLLRSDTDSEGARRGAT---GCNDPLEMVRQMGSEEYRRWSPAARSRALAWLCDEALSAATMNDLVKRVQEAKEVVDRKDREIKAAVRQRLRDQ-EATEARGFHNPHN---------------RRGTEAEMITARMLMESPDVKTVRELGSVKVRLKPLGLDRDRRRYWLFATGEDHRLFVEHNEVWGCYARVSQLKALHKWLDRRGVRERTLKAALREHLIANLGVSAQELEPVRRPYGGSSRGRSDVDVLGGGGNEGXXXXXXXXXXDGQQYLGEPAEVAREKERERSAGLLALNSCGFAAEEQRRALKRLCSSFAVD-LHSLRAAGLAFELKTSGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTQMPPGVSNPGQAAGVRLGDLLVSVDTIVAETPRRLAQGLKDTGLSQSGKLVVVKVLSDV-LLTDGQGEPLQQALDYAAIDMVKGALLESESRLHHSFVVGPGWEGQACTEWRLGVSFAGQGADQNRGGGGGRETDVPAGGATPSFTEPKKQQQQATSELVGGSGAIFQEGSMPVLETQGPLSLGPCSVAAGRAAVEELARRMLYIEALVFKQDTVVDARWSE--FGRRRKWRTFVNNAQTAPQLLAAWGAFKDVIDWQAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSLEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGS-----SRRAKGAQ--PFATIELEPTPVPRSFE---ELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAADAAVNVGMETLDEPKLAAELGKTVEDGKRLEALWNKHMSAAISASPELATMPGMQKLARQLG 1852          
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: A0A6H5L3E5_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E5_9PHAE)

HSP 1 Score: 243 bits (619), Expect = 1.930e-63
Identity = 129/344 (37.50%), Postives = 195/344 (56.69%), Query Frame = 0
Query: 1086 SAVQALRQRVLELELALVKQSTVLAATWTDPAVRQRIKWCHYVERARTASQLLVALGALEEVIDWDSIDEVWKGLDRKAFLEKIPEERRKYLPSKGDKVVYYGIVHGKAAKQDRDMKLKAMWGGCKPMIGQIMECKVVSIEYHAGGQRKPTRSNKSQDVQYYPFVKVELERISPPEGMELPVSICLKPAVKPSARLNRLLRRSIAAMRRLDGVDTFMTPVNPTIYPDYHDIISDPMDLGTMWDRCGDNYYGSLVQFRNDLVLVCNNCRRYCYRRFPNLPETCDTIVSDGLAYLERAGVARQIAEAEGHINDMESLWQEHMSVCIVQAASAGTLADAERLASQLG 1429
            +AV+ L +R+L +E  + KQ TV+ A W++    +R KW  +V  A+TA QLL A GA ++VIDW +    +  LDR+ FL  +P   R  +P KGD+V+YYG  H  + + +     + +WG   P  G + +  V SI YH GG      S +++  Q  PF  +ELE    P   E    + L P  +P  +LNRLL++++ AMR    V  F+ PV+ TIYPDY+D+IS+PMDL  +W RC    Y S+ +F+ +L LV +NCR YC  +FP LP   D  V+ G+  L+   +A ++++       +E+LW +HMS  I  +    T+   ++LA QLG
Sbjct:   50 AAVEELARRMLHIEALVFKQDTVVDARWSE--FGRRRKWRTFVNNAQTAPQLLAAWGAFKDVIDWQAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSMEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGS-----SRRAKGAQ--PFATIELEPTPVPRSFE---ELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAADAAVNVGMETLDEPKLAAELSKTVEDGKRLEALWNKHMSAAISASPELATMPGMQKLARQLG 381          
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: W7U279_9STRA (Transcription initiation factor subunit taf1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U279_9STRA)

HSP 1 Score: 196 bits (498), Expect = 1.970e-46
Identity = 239/911 (26.23%), Postives = 367/911 (40.29%), Query Frame = 0
Query:  561 TQNKGHAGVMDDINAL-VNAEHTIWGPASAIAEQARAVQEAFTELYEDKVLGRLQQLAKAEAADSELPSKASDVNFNMKD------------------------------------------WREVAWWMGCREYAQWPVALRIMVLGWLCDEVLSTNSVRELVDRVVEAREVVAKQDKEMP--RIVKRMMKEQGERRRHRMYYGDVEAPIGPDGQPIPLEEPRTYTEKEMLQRALQEEPYDIQVARKLATIAVRMVPVGQDRDYRRYWLLDRKCDEHIYVECEGSW---ACLSTADEVKAVYEWLDRRGKRERALKNALRE----YLVDHMRVTEEELCAIDASEEIEHGISMRDSWENKEEEGQIESQ--GVDSATQESAMFQVCSTTRVEPLHLSNYDGRLYHKGWVMLDLNVTMGPQG-LGLVL---NVHNSAVVVQKKDDSSSSPAMRAGVMKGDHVVQVNGIIAKAPQQLATAIKSAGL-----SSDGQVLTLTLLREVE-LTTSSTGEPGQGLLLYSPLQNLQGVLLKREGQLSHPYAIGEGW--TAKRFDWRAGVVTATATAAVKVAESKEEGNGNTIGEPSVSAVQALRQRVLELELALVKQSTVLAATWTDPAVRQRI-KWCHYVERARTASQLLVALGALEEVIDWDSIDEVWKGLDRKAFLEKIPEERRKYLPSKGDKVVYYGIVHGKAAKQDRDMKLKAMWG---------GCKPMIGQIMECKVVSIEYHA-------------GGQRKPTRSNKSQDVQYYPFVKVELERISPPEGMELPVSICLKPAVKPSARLNRLLRRSIAAMRRLDGVDTFMTPVNPTIYPDYHDIISDPMDLGTMWDRCGDNYYGSLVQFRNDLVLVCNNCRRYCYRRFPNLPETCDTIVS---DGLAYLE 1379
            ++ +G  GV+DD+  + VN E    GP +A+ E A+A+ E   E  + +VL  L++ AK  A +     +  D     +D                                          W+ V   +G   +A+ PV  R+MVL WL DEV S+ +VREL++ V  ARE   K        R  K  M  Q +  +   Y         P   P  LE      E+E L+ +            +LA   +R+ P+G DR +RRYW         +Y E E          +  ++ A+  WL  R  RE AL++ + E    Y  D   +T+            E  ++ R S E+ +   + +S   GV+  +++ AM                    LY   ++   L +T   +G LGLV     +  +A    +++   + P  R G+   D +V VNG +   P+  + A++           + +   L +LRE     TS   +     +  S    +QG LL  E ++ HP AIG  W  +  +  WR  V+ A         E K+               ++LR+  LELE  L    TVL+    +   +    KW  Y+  A+T SQLL+ L  L  ++D   ++   + ++R A+   +P+E+   LP  G  V+YY   H KAA +        MW          G     G +  C+V  IEYHA               + K  R N+     +YP  K+ L R                  V+P A L+RLL R + +   L   D F  PV+   YPDY+++I +PMD  T+  R   + YG L  F  DL L+  NC  YC  RFP LP   D +V    + + YLE
Sbjct:  900 SKGRGAKGVLDDVRLVWVNCEQ-YHGPDAALTEVAQALSEELEEKIQTRVLEPLERRAKWLAGEGRKEGEVEDGKREEEDRVLGLGGDGEGEDGGVAASTTTEVGSKLTSSLGLASAPDIQGWKTVVDQLGRLTFAELPVKTRVMVLRWLADEVASSATVRELLENVAGAREPYRKMAARRTAFRAQKAHMAAQQQAAQASGY--------APPPSPANLEGWTQADEREFLRVS------------ELALKDLRLRPLGVDRFHRRYWTFPGDKKHAVYAEDEADGPVTVVYRSKVDLIALIRWLSDRTLREGALRSRVIELTERYYPDGPDLTQAINVPYSPVPNGEGAVNGRKSTESADAFCRYQSAYAGVNLPSEQQAMMP-----------------DLYR--YICYPLGITARERGCLGLVYADQELKLTAYRDHRQNLVRTPPFPRMGINVDDRIVLVNGKLIDGPKWPSGAVEDDSTLVHLPGGETEEFQLMILREAGGAQTSINVQQLPPRVTCSEWNFVQGWLLHLEREMCHPLAIGPDWEGSGAKARWRQMVMRALD------GEKKK--------------AESLRKAALELEGRLRACGTVLSKEDREGRAKGTGGKWRQYMSLAQTPSQLLLGLRLLHSLLDRRVLNRALQSMERAAWQALLPKEKSIELPDVGSFVIYYPQGH-KAAMRHNARFQGPMWNVEGPHEEQNGAAAGAGAVQVCQVHGIEYHAFDPTAKDPFASSAWARVKLARLNEPAYHYFYPERKLRLYR-----------------PVEPRASLSRLLARVVLSAMELREADQFCEPVDRNEYPDYYEMIWNPMDFTTLLSRVRRHMYGELSTFLKDLELISRNCHAYCDARFPTLPVLADQVVGVAKETVKYLE 1732          
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: I2CQX7_NANGC (Transcription initiation factor TFIID subunit 1 (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQX7_NANGC)

HSP 1 Score: 186 bits (473), Expect = 1.110e-43
Identity = 215/793 (27.11%), Postives = 329/793 (41.49%), Query Frame = 0
Query:  636 NMKDWREVAWWMGCREYAQWPVALRIMVLGWLCDEVLSTNSVRELVDRVVEAREVVAKQDKEMP--RIVKRMMKEQGERRRHRMYYGDVEAPIGPDGQPIPLEEPRTYTEKEMLQRALQEEPYDIQVARKLATIAVRMVPVGQDRDYRRYWLLDRKCDEHIYVECEGSW---ACLSTADEVKAVYEWLDRRGKRERALKNALRE----YLVDHMRVTEEELCAIDASEEIEHGISMRDSWENKEEEGQIESQ--GVDSATQESAMFQVCSTTRVEPLHLSNYDGRLYHKGWVMLDLNVTMGPQG-LGLVL---NVHNSAVVVQKKDDSSSSPAMRAGVMKGDHVVQVNGIIAKAPQQLATAIKSAGL-----SSDGQVLTLTLLREVE-LTTSSTGEPGQGLLLYSPLQNLQGVLLKREGQLSHPYAIGEGW--TAKRFDWRAGVVTATATAAVKVAESKEEGNGNTIGEPSVSAVQALRQRVLELELALVKQSTVLAATWTDPAVRQRI-KWCHYVERARTASQLLVALGALEEVIDWDSIDEVWKGLDRKAFLEKIPEERRKYLPSKGDKVVYYGIVHGKAAKQDRDMKLKAMWG---------GCKPMIGQIMECKVVSIEYHA-------------GGQRKPTRSNKSQDVQYYPFVKVELERISPPEGMELPVSICLKPAVKPSARLNRLLRRSIAAMRRLDGVDTFMTPVNPTIYPDYHDIISDPMDLGTMWDRCGDNYYGSLVQFRNDLVLVCNNCRRYCYRRFPNLPETCDTIVS---DGLAYLE 1379
            +++ W+ V   +G   +A+ PV  R+MVL WL DEV S+ +VREL++ V  ARE   K        R  K  M  Q +  +   Y         P   P  LE      E+E L+ +            +LA   +R+ P+G DR +RRYW         +Y E E          +  ++ A+  WL  R  RE AL++ + E    Y  D   +T+            E  ++ R S E+ +   + +S   GV+  +++ AM                    LY   ++   L +T   +G LGLV     +  +A    +++   + P  R G+   D +V VNG +   P+  + A++           + +   L +LRE     TS   +     +  S    +QG LL  E ++ HP AIG  W  +  +  WR  V+ A         E K+               ++LR+  LELE  L    TVL+    +   +    KW  Y+  A+T SQLL+ L  L  ++D   ++   + ++R A+   +P+E+   LP  G  V+YY   H KAA +        MW          G     G +  C+V  IEYHA               + K  R N+     +YP  K+ L R                  V+P A L+RLL R + +   L   D F  PV+   YPDY+++I +PMD  T+  R   + YG L  F  DL L+  NC  YC  RFP LP   D +V    + + YLE
Sbjct:   26 DIQGWKTVVDQLGRLTFAELPVKTRVMVLRWLADEVASSATVRELLENVAGAREPYRKMAARRTAFRAQKAHMAAQQQAAQASGY--------APPPSPANLEGWTQADEREFLRVS------------ELALKDLRLRPLGVDRFHRRYWTFPGDKKHAVYAEDEADGPVTVVYRSKVDLIALIRWLSDRTLREGALRSRVIELTERYYPDGPDLTQAINVPYSPVPNGEGAVNGRKSTESADAFCRYQSAYAGVNLPSEQQAMMP-----------------DLYR--YICYPLGITARERGCLGLVYADQELKLTAYRDHRQNLVRTPPFPRMGINVDDRIVLVNGKLIDGPKWPSGAVEDDSTLVHLPGGETEEFQLMILREAGGAQTSINVQQLPPRVTCSEWNFVQGWLLHLEREMCHPLAIGPDWEGSGAKARWRQMVMRALD------GEKKK--------------AESLRKAALELEGRLRACGTVLSKEDREGRAKGTGGKWRQYMSLAQTPSQLLLGLRLLHSLLDRRVLNRALQSMERAAWQALLPKEKSIELPDVGSFVIYYPQGH-KAAMRHNARFQGPMWNVEGPHEEQNGAAAGAGAVQVCQVHGIEYHAFDPTAKDPFASSAWARVKLARLNEPAYHYFYPERKLRLYR-----------------PVEPRASLSRLLARVVLSAMELREADQFCEPVDRNEYPDYYEMIWNPMDFTTLLSRVRRHMYGELSTFLKDLELISRNCHAYCDARFPTLPVLADQVVGVAKETVKYLE 741          
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: A0A6H5L351_9PHAE (DNMT1-RFD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L351_9PHAE)

HSP 1 Score: 163 bits (412), Expect = 2.100e-36
Identity = 159/530 (30.00%), Postives = 235/530 (44.34%), Query Frame = 0
Query:  531 LSLYDIWQRIAGGWYDVTQPKAWLDPSAETTQ-NKGHAGVMDDINALVNAEHTIWGPASAIAEQARAVQEAFTELYEDKVLGRLQQLAK--------AEAADSELPSKA----SDVNFN--------MKDWREVAWWMGCREYAQWPVALRIMVLGWLCDEVLSTNSVRELVDRVVEAREVVAKQDKEMPRIVKRMMKEQGERRRHRMYYGDVEAPIGPDGQPIPLEEPRTYTEKEMLQRALQEEPYDIQVARKLATIAVRMVPVGQDRDYRRYWLL---DRKCDEHIYVECEGSWACLSTADEVKAVYEWLDRRGKRERALKNALREYLVDHMRVTEEELCAI------------DASEEIEHGISMRDSW-ENKEEEGQ-----------------------IESQGVDSATQESAMFQVCSTTRVEPLHLSNYDGRLYHK---GWVMLDLNVTMGPQGLGLVLNVHNSAVVVQ---KKDDSSSSPAMRAGVMKGDHVVQVNGIIAKAPQQLATAIKSAGLSSDGQVL 994
            L L  I +R   GWYD+ +P A  +P  E+     GHAGV  D+  +        G  SAI EQAR V + F  LYE  VL  L +L K        A A   EL        SD +            D  E+   MG  EY +W  A R   L WLCDE LS  ++ +LV +V EA+EVV ++D+E+   V++ +++Q E    R ++                   R  TE EM+   +  E  D++  R+L ++ VR+ P+G DRD RRYWL    +     + +                ++   W     +   + + ALRE+L+ ++ V+ +EL  +            D       G    D   E +EE+GQ                       + S G  +  Q  A+ ++CS+  V+ LH     G  +     GWVM DL V MGP GLGL L+V +  VVV    +     S+P   AGV  GD +V V+ I+A+ P++LA  +K  GLS  G+++
Sbjct: 1331 LDLGTILRRAENGWYDL-EPGA--EPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSTAVAAAGRGELEEGRVLLRSDTDSEDARRGAAGCNDPLEMVRQMGSEEYKRWSPAARSRALAWLCDEALSAATMNDLVKKVQEAKEVVDRKDREIKAAVRQRLRDQ-EATEARGFHNPHN---------------RRSTEAEMITARMLMESPDVKTVRELGSVKVRLKPLGLDRDRRRYWLFATGEALTTGYSWSTTRFGGVTPGFPSSRRSTSGWTVEASESAPSRRAALREHLIANLGVSAQELEPVRRPFGGSSRGRSDVDRFGGGGNEGADEGDEGEEEDGQQYLGEPAEVAREKERERSAGLSALNSCGFAAEEQRRALKRLCSSFAVD-LHSLRAAGLAFELKTCGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTEMPPGVSNPGQAAGVRLGDLLVSVDTIVAETPRRLAQGLKDTGLSQSGKLV 1840          
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: A0A835ZDW7_9STRA (Bromo domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW7_9STRA)

HSP 1 Score: 148 bits (373), Expect = 8.930e-32
Identity = 140/493 (28.40%), Postives = 206/493 (41.78%), Query Frame = 0
Query:  589 AIAEQARAVQEAFTELYEDKVLGRLQQLAKAEAADSELPSKASDVNFNMKDWREVAWWMGCREYAQWPVALRIMVLGWLCDEVLSTNSVRELVDRVVEAREVVAKQDKEMPRIVKRMMKEQGERRRHRMYYGDVEAPIGPDGQPIPLEEPRTYTEKEMLQRALQEEPYDIQVARKLATIAVRMVPVGQDRDYRRYWLLDRKCDE-------HIYVECEGSWACLSTADEVKAVYEWLDRRGKRERALKNALREYLVDHMRVTEEELCAIDASEEIEHGISMRDSWENKEEEGQIESQGVDSATQESAMFQVCSTTRVEPLHLSNYDGRLYHKGWVMLDLNVTMGPQGLGLVLNVHNSAVVVQK---KDDSSSSPAMRAGVMKGDHVVQVNGIIAKAPQQLAT--------AIKSAGLSSDGQVLTLTLLREVELTTSSTGEPGQGLLLYSPLQNLQGVLLKREGQLSHPYAIGEGWTA--KRFDWRAGVVTAT 1061
            A +EQA A  E F  LY   VL  L+  +K    D+           +  +W +V   M  +EY QW V LR+ VL WLCD+ LST+++RE+ +R   A+E +A +  EM                                        ++Y                    R LA +  R+ P+G DR +RRYWL++R  DE       H+  E   +W   ST   +  +++WLD RG RE AL+  LR  L+D+      EL A    +E  +      +       G ++     +  Q SA+   C    V P  L   D   Y +G ++L  +V  G  G G+ L     ++ V++   K       A RAGV+  D +V V G   + P+++A         A++      D    ++  +R V L    T  P Q      PLQ L G+LL  E  L HPY +GEGW    K   WR  V++AT
Sbjct: 1263 AASEQAAAAAE-FQTLYNRHVLAPLEHASKH--GDNGAVKAEDGAQGDSLEWGQVVQAMAQQEYGQWDVRLRVQVLAWLCDQCLSTDTLREVFERAQVAKEQLASESAEM----------------------------------------KSY--------------------RYLAALVQRLEPLGHDRHHRRYWLINR--DETAGADSGHVLAEDGTNWYSFSTVGSLLELHKWLDARGIRENALRQVLRHLLLDNGLSQPSELAAHHHPDEHCYARVAFLAPARILAAGSMDF--TMAQQQRSALTLGCKDLIVAPDALVPPDDTSYREGPLLLSADVEAGG-GHGMTLVAEKGSLFVKRACEKGGGGPDAAARAGVLAKDGLVAVRGRCVRTPEEVAALAEASHIVAVEVETADQDQPTYSIQFVRTVPLEDKDTKLPAQ----IPPLQYLAGLLLDSESLLCHPYNVGEGWVGGRKSVAWRQSVISAT 1683          
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: A0A5D6YQF5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YQF5_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.710e-21
Identity = 87/296 (29.39%), Postives = 138/296 (46.62%), Query Frame = 0
Query: 1090 ALRQRVLELELALVKQSTVLAATWTDPAVRQRIKWCHYVERARTASQLLVALGAL-EEVIDWDSIDEVWKGLDRKAFLEKIPEERRKYLPSKGDKVVYYGIVHGKAAKQDRDMKLKAMWGGCKPMIGQI-MECKVVSIEYHAGGQRKPTRSNKSQ--DVQYYPFVKVELERISPPEGMELPVSICLKPAVKPSARLNRLLRRSIAAMRRLDGVDTFMTPVNPTIYPDYHDIISDPMDLGTMWDRCGDNYYGSLVQFRNDLVLVCNNCRRYCYRRFPNLPETCDTIVSDGLAYLERA 1381
            A R   L+LE A+V  +            R+R +W   +E A T +QL   L  L +E ++ D+  + +  LDRK + +   +E R ++P  G  VVY+G  H +A K+D   K K +    +P   +  + C V S+ YH GG         +   DV  Y FV+              P S+ L P   P+ RL+R+L R ++ ++       F+ PV+   +P+Y +I+  PMDL  +  +     Y    Q   D+ L+C+NC  +C  RFP LP     +V    A ++RA
Sbjct: 1522 AARDLFLQLEDAVVAAAAAGNEAVRPSWQRKRREWRLALEGACTYAQLAFLLHLLLDECVNVDAFMDQYARLDRKDWFKLRAKESRNFIPEVGKDVVYFGDGHAQALKEDAKAKKKRLAKKSEPPRSRATLVCAVESVSYHHGGGDPYALVVLAPRPDVSGYSFVRA-------------PGSV-LCPQPSPAQRLSRILMRVVSKLKLQTDAGPFLEPVSDREFPEYKEIVLQPMDLSAVTRKVRALEYRDAGQLLADMRLICSNCELFCDGRFPALPPLARNLVELADALVKRA 1803          
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: W2Q4M5_PHYPN (Uncharacterized protein n=46 Tax=Phytophthora parasitica TaxID=4792 RepID=W2Q4M5_PHYPN)

HSP 1 Score: 106 bits (265), Expect = 3.740e-19
Identity = 83/284 (29.23%), Postives = 126/284 (44.37%), Query Frame = 0
Query: 1097 ELELALVKQSTVLAATWTDPAVRQRIKWCHYVERARTASQLLVALGAL-EEVIDWDSIDEVWKGLDRKAFLEKIPEERRKYLPSKGDKVVYYGIVHGKAAKQDRDMKLKAMWGGCK-PMIGQIMECKVVSIEYHAGGQRKPTRSNKSQDVQYYPFVKVELERISPPEGMELPVSICLK-------PAVKPSARLNRLLRRSIAAMRRLDGVDTFMTPVNPTIYPDYHDIISDPMDLGTMWDRCGDNYYGSLVQFRNDLVLVCNNCRRYCYRRFPNLPETCDTIV 1371
            ELE A V        T      R+R +W   +E + T +QL+  L  L EE ++ ++  ++   LDR+ +L+  P+E R ++P  G  VVY+G  H  A K+D   K K        P+    + C V  + YH GG                P+    L+ IS     E     C++       P      RL R+  R +A ++ L     F+ PV+   +P Y +II  PMDLG M  +     Y +  +F  DL L+ +NC+ +C  RFP LP     +V
Sbjct: 1481 ELENAAVAALNSGVETIRPSWQRKRHEWRLALEGSCTYAQLVFLLHLLLEEFLNVEAFMDLHIRLDRREWLKLRPKETRNFIPEVGKTVVYFGDGHALALKEDEKSKRKRFTQKSDTPVRKASVICTVEKVSYHHGGGD--------------PYALAVLKPISDMANHE-----CIREPGTLFCPLPSRDQRLARVFLRVLAKLKMLADAGPFLEPVSDREFPQYKEIILQPMDLGKMTTKASTLEYKNAAEFMTDLRLMRDNCQLFCEGRFPTLPPLAHNLV 1745          
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: A0A0W8AY53_PHYNI (SWR1 complex bromodomain subunit bdf1 n=2 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8AY53_PHYNI)

HSP 1 Score: 105 bits (263), Expect = 5.870e-19
Identity = 83/284 (29.23%), Postives = 126/284 (44.37%), Query Frame = 0
Query: 1097 ELELALVKQSTVLAATWTDPAVRQRIKWCHYVERARTASQLLVALGAL-EEVIDWDSIDEVWKGLDRKAFLEKIPEERRKYLPSKGDKVVYYGIVHGKAAKQDRDMKLKAMWGGCK-PMIGQIMECKVVSIEYHAGGQRKPTRSNKSQDVQYYPFVKVELERISPPEGMELPVSICLK-------PAVKPSARLNRLLRRSIAAMRRLDGVDTFMTPVNPTIYPDYHDIISDPMDLGTMWDRCGDNYYGSLVQFRNDLVLVCNNCRRYCYRRFPNLPETCDTIV 1371
            ELE A V        T      R+R +W   +E + T +QL+  L  L EE ++ ++  ++   LDR+ +L+  P+E R ++P  G  VVY+G  H  A K+D   K K        P+    + C V  + YH GG                P+    L+ IS     E     C++       P      RL R+  R +A ++ L     F+ PV+   +P Y +II  PMDLG M  +     Y +  +F  DL L+ +NC+ +C  RFP LP     +V
Sbjct: 1091 ELENAAVAALNSGVETIRPSWQRKRHEWRLALEGSCTYAQLVFLLHLLLEEFLNVEAFMDLHIRLDRREWLKLRPKETRNFIPEVGKTVVYFGDGHALALKEDEKSKRKRFTQKSDTPVRKASVICTVEKVSYHHGGGD--------------PYALAVLKPISDMANHE-----CIREPGTLFCPLPSRDQRLARVFLRVLAKLKMLADAGPFLEPVSDREFPQYKEIILQPMDLGKMTTKASMLEYKNAAEFMTDLRLMRDNCQLFCEGRFPTLPPLAHNLV 1355          
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: A0A1Y1W9W5_9FUNG (Bromodomain-containing protein (Fragment) n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1W9W5_9FUNG)

HSP 1 Score: 68.9 bits (167), Expect = 3.470e-10
Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 0
Query: 1281 LNRLLRRSIAAMRRLDGVDTFMTPVNPTIYPDYHDIISDPMDLGTMWDRCGDNYYGSLVQFRNDLVLVCNNCRRY 1355
            L   L R I  +++ D    F+ PV+ T+  DY  +I +PMDLGTM  +   N Y S+ +FR DL+LVC+N R+Y
Sbjct:   16 LRSSLERLITRIKKRDSYGFFLDPVDTTVITDYLSVIDEPMDLGTMQSKVERNAYYSIDEFRRDLLLVCDNARKY 90          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G6R7_ECTSI3.400e-12932.48Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L3E5_9PHAE1.930e-6337.50Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
W7U279_9STRA1.970e-4626.23Transcription initiation factor subunit taf1 n=2 T... [more]
I2CQX7_NANGC1.110e-4327.11Transcription initiation factor TFIID subunit 1 (F... [more]
A0A6H5L351_9PHAE2.100e-3630.00DNMT1-RFD domain-containing protein n=1 Tax=Ectoca... [more]
A0A835ZDW7_9STRA8.930e-3228.40Bromo domain-containing protein n=1 Tax=Tribonema ... [more]
A0A5D6YQF5_9STRA1.710e-2129.39Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
W2Q4M5_PHYPN3.740e-1929.23Uncharacterized protein n=46 Tax=Phytophthora para... [more]
A0A0W8AY53_PHYNI5.870e-1929.23SWR1 complex bromodomain subunit bdf1 n=2 Tax=Phyt... [more]
A0A1Y1W9W5_9FUNG3.470e-1042.67Bromodomain-containing protein (Fragment) n=1 Tax=... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 1547..1574
NoneNo IPR availableCOILSCoilCoilcoord: 116..136
NoneNo IPR availableCOILSCoilCoilcoord: 1699..1738
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 286..318
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1511..1536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1517..1531
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1436..1491
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 448..482
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1568..1738
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1460..1489
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 341..366
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1699..1738
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1659..1683
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 265..387
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1592..1627
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1436..1453
NoneNo IPR availablePANTHERPTHR15546BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2Acoord: 12..83
coord: 734..862
NoneNo IPR availablePANTHERPTHR15546:SF2BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN, 2Acoord: 12..83
coord: 734..862
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 927..1002
e-value: 1.1E-5
score: 34.8
IPR001478PDZ domainPROSITEPS50106PDZcoord: 919..986
score: 9.069
IPR018501DDT domainSMARTSM00571testlast3coord: 11..84
e-value: 0.0041
score: 26.4
IPR018501DDT domainPFAMPF02791DDTcoord: 13..79
e-value: 2.2E-11
score: 43.9
IPR001487BromodomainSMARTSM00297bromo_6coord: 1274..1406
e-value: 1.1E-6
score: 38.2
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 1299..1360
e-value: 1.2E-16
score: 60.6
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 1293..1355
score: 14.6792
IPR028941WHIM2 domainPFAMPF15613WSDcoord: 769..834
e-value: 5.0E-11
score: 43.0
IPR036034PDZ superfamilyGENE3D2.30.42.10coord: 919..1008
e-value: 3.6E-6
score: 28.9
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 916..1003
IPR028942WHIM1 domainPFAMPF15612WHIM1coord: 645..680
e-value: 4.1E-4
score: 19.8
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 1272..1391
e-value: 4.1E-20
score: 73.9
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 1264..1355
IPR018359Bromodomain, conserved sitePROSITEPS00633BROMODOMAIN_1coord: 1298..1355

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1028contigC-australica_Contig_1028:5518..16727 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1028.3.1mRNA_C-australica_Contig_1028.3.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1028 5518..16729 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1028.3.1 ID=prot_C-australica_Contig_1028.3.1|Name=mRNA_C-australica_Contig_1028.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=1738bp
GLPPRAKAFLGDLFGEALSVWTCLQMFCGLLHLGRFTLDEFLAAVACDSP
ELPGPKETPQSGVPKLLSNVHMRLLDFLLWEATREARSSNRPMYTHTFWD
KLYFFAKPYQHLSFRAKDAAAKAAKEQKKKQQLLQHQPQLGLGVPEEPEE
EGDLPGQPETVLPGIRSNWTLARSTGTCWMEMARLILMRKLGLLSEEEEA
NDKHALLAAHLDPVAECSRILRKIVAKMDDAKPFLRYTAVDQRAGERVLA
AYAAHAAQMSAATTASATSAAEQPGQPGTLVAAGDEGEQESSQATVPQPA
ITEESGNGTPSPTLMEISDPTQKPLRGQPAAAPDHAPAASSKASPATTPM
DTSHEVPATTQDPTPDPAASLAPALPTTLAPAPTPMVTPHEAPAAALTPA
AGAAAVPTPMCISAEGVDLTASDGVEPVAATAVSATVDTPIPAPTPMEAP
PAPMEALPATPSAASEPGTATDPFSEGSEQVAAGAVPEVVPEVAQGQALS
GANEVQAPAQAIVPAALPSVPAVPAGGRARLSLYDIWQRIAGGWYDVTQP
KAWLDPSAETTQNKGHAGVMDDINALVNAEHTIWGPASAIAEQARAVQEA
FTELYEDKVLGRLQQLAKAEAADSELPSKASDVNFNMKDWREVAWWMGCR
EYAQWPVALRIMVLGWLCDEVLSTNSVRELVDRVVEAREVVAKQDKEMPR
IVKRMMKEQGERRRHRMYYGDVEAPIGPDGQPIPLEEPRTYTEKEMLQRA
LQEEPYDIQVARKLATIAVRMVPVGQDRDYRRYWLLDRKCDEHIYVECEG
SWACLSTADEVKAVYEWLDRRGKRERALKNALREYLVDHMRVTEEELCAI
DASEEIEHGISMRDSWENKEEEGQIESQGVDSATQESAMFQVCSTTRVEP
LHLSNYDGRLYHKGWVMLDLNVTMGPQGLGLVLNVHNSAVVVQKKDDSSS
SPAMRAGVMKGDHVVQVNGIIAKAPQQLATAIKSAGLSSDGQVLTLTLLR
EVELTTSSTGEPGQGLLLYSPLQNLQGVLLKREGQLSHPYAIGEGWTAKR
FDWRAGVVTATATAAVKVAESKEEGNGNTIGEPSVSAVQALRQRVLELEL
ALVKQSTVLAATWTDPAVRQRIKWCHYVERARTASQLLVALGALEEVIDW
DSIDEVWKGLDRKAFLEKIPEERRKYLPSKGDKVVYYGIVHGKAAKQDRD
MKLKAMWGGCKPMIGQIMECKVVSIEYHAGGQRKPTRSNKSQDVQYYPFV
KVELERISPPEGMELPVSICLKPAVKPSARLNRLLRRSIAAMRRLDGVDT
FMTPVNPTIYPDYHDIISDPMDLGTMWDRCGDNYYGSLVQFRNDLVLVCN
NCRRYCYRRFPNLPETCDTIVSDGLAYLERAGVARQIAEAEGHINDMESL
WQEHMSVCIVQAASAGTLADAERLASQLGVPLPSQLALPPPAPAPPPPQQ
VPGYMVAPMQQAPMQQQVYSAAPAPPVGSSSSQPQGTAPAQVYGAAPTGY
AAPGQAPYSAPQAGYPAQAPAPAPAPAPAPAPAHVAVTEQAAAAPMAQAV
QDELAQLKAQLAERDAALAQAQQKIASMEQPPEPGPPEQQSLQQPPSRLA
SEESGSGSAAALDPLTSHPTSNPTPTEEMGADALLGLAAIASASAPAPEA
APGAASTYLGASASASDASTQQGAGSDCAAIPPSQSLSAIGAAAEGAGAA
QSQQEQQQLLAQQQAQQEEQARQQQLLAQQQAQQEQQQ
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR018501DDT_dom
IPR001487Bromodomain
IPR028941WHIM2_dom
IPR036034PDZ_sf
IPR028942WHIM1_dom
IPR036427Bromodomain-like_sf
IPR018359Bromodomain_CS