mRNA_C-australica_Contig_1028.3.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI) HSP 1 Score: 459 bits (1182), Expect = 3.400e-129 Identity = 331/1019 (32.48%), Postives = 491/1019 (48.18%), Query Frame = 1 Query: 1591 LSLYDIWQRIAGGWYDVTQPKAWLDPSAETTQ-NKGHAGVMDDINALVNAEHTIWGPASAIAEQARAVQEAFTELYEDKVLGRLQQLAK---AEAA------------------------DSELPSKASDVNFNMKDWREVAWWMGCREYAQWPVALRIMVLGWLCDEVLSTNSVRELVDRVVEAREVVAKQDKEMPRIVKRMMKEQGERRRHRMYYGDVEAPIGPDGQPIPLEEPRTYTEKEMLQRALQEEPYDIQVARKLATIAVRMVPVGQDRDYRRYWLLDRKCDEHIYVECEGSWACLSTADEVKAVYEWLDRRGKRERALKNALREYLVDHMRVTEEELCAI----------------------------------DASEEIEHGISMRDSWENKEEEG--QIESQGVDSATQESAMFQVCSTTRVEPLHLSNYDGRLYH---KGWVMLDLNVTMGPQGLGLVLNVHNSAVVVQ---KKDDSSSSPAMRAGVMKGDHVVQVNGIIAKAPQQLATAIKSAGLSSDGQVLTLTLLREVELTTSSTGEPGQGLLLYSPLQNLQGVLLKREGQLSHPYAIGEGWTAKRF-DWRAGVVTA-------------------TATAAVKVAESKEE----------GNGNTIGEPSV--------------------SAVQALRQRVLELELALVKQSTVLAATWTDPAVRQRIKWCHYVERARTASQLLVALGALEEVIDWDSIDEVWKGLDRKAFLEKIPEERRKYLPSKGDKVVYYGIVHGKAAKQDRDMKLKAMWGGCKPMIGQIMECKVVSIEYHAGGQRKPTRSNKSQDVQYYPFVKVELERISPPEGMELPVSICLKPAVKPSARLNRLLRRSIAAMRRLDGVDTFMTPVNPTIYPDYHDIISDPMDLGTMWDRCGDNYYGSLVQFRNDLVLVCNNCRRYCYRRFPNLPETCDTIVSDGLAYLERAGVARQIAEAEGHINDMESLWQEHMSVCIVQAASAGTLADAERLASQLG 4287 L L I +R GWYD+ +P A +P E+ GHAGV D+ + G SAI EQAR V + F LYE VL L +L K AA DSE + + D E+ MG EY +W A R L WLCDE LS ++ +LV RV EA+EVV ++D+E+ V++ +++Q E R ++ R TE EM+ + E D++ R+L ++ VR+ P+G DRD RRYWL D ++VE W C + ++KA+++WLDRRG RER LK ALRE+L+ ++ V+ +EL + D + + + E + G + S G + Q A+ ++CS+ V+ LH G + GWVM DL V MGP GLGL L+V + VVV + S+P AGV GD +V V+ I+A+ P++LA +K GLS G+++ + +L +V L T GEP Q L Y+ + ++G LL+ E +L H + +G GW + +WR GV A A E K++ G+G E S+ +AV+ L +R+L +E + KQ TV+ A W++ +R KW +V A+TA QLL A GA ++VIDW + + LDR+ FL +P R +P KGD+V+YYG H + + + + +WG P G + + V SI YH GG S +++ Q PF +ELE P E + L P +P +LNRLL++++ AMR V F+ PV+ TIYPDY+D+IS+PMDL +W RC Y S+ +F+ +L LV +NCR YC +FP LP D V+ G+ L+ +A ++ + +E+LW +HMS I + T+ ++LA QLG Sbjct: 870 LDLGTILRRAENGWYDL-EPGA--EPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSAAXXXXXXXXGRGGLEEGRVLLRSDTDSEGARRGAT---GCNDPLEMVRQMGSEEYRRWSPAARSRALAWLCDEALSAATMNDLVKRVQEAKEVVDRKDREIKAAVRQRLRDQ-EATEARGFHNPHN---------------RRGTEAEMITARMLMESPDVKTVRELGSVKVRLKPLGLDRDRRRYWLFATGEDHRLFVEHNEVWGCYARVSQLKALHKWLDRRGVRERTLKAALREHLIANLGVSAQELEPVRRPYGGSSRGRSDVDVLGGGGNEGXXXXXXXXXXDGQQYLGEPAEVAREKERERSAGLLALNSCGFAAEEQRRALKRLCSSFAVD-LHSLRAAGLAFELKTSGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTQMPPGVSNPGQAAGVRLGDLLVSVDTIVAETPRRLAQGLKDTGLSQSGKLVVVKVLSDV-LLTDGQGEPLQQALDYAAIDMVKGALLESESRLHHSFVVGPGWEGQACTEWRLGVSFAGQGADQNRGGGGGRETDVPAGGATPSFTEPKKQQQQATSELVGGSGAIFQEGSMPVLETQGPLSLGPCSVAAGRAAVEELARRMLYIEALVFKQDTVVDARWSE--FGRRRKWRTFVNNAQTAPQLLAAWGAFKDVIDWQAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSLEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGS-----SRRAKGAQ--PFATIELEPTPVPRSFE---ELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAADAAVNVGMETLDEPKLAAELGKTVEDGKRLEALWNKHMSAAISASPELATMPGMQKLARQLG 1852
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: A0A6H5L3E5_9PHAE (Bromo domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3E5_9PHAE) HSP 1 Score: 243 bits (619), Expect = 1.930e-63 Identity = 129/344 (37.50%), Postives = 195/344 (56.69%), Query Frame = 1 Query: 3256 SAVQALRQRVLELELALVKQSTVLAATWTDPAVRQRIKWCHYVERARTASQLLVALGALEEVIDWDSIDEVWKGLDRKAFLEKIPEERRKYLPSKGDKVVYYGIVHGKAAKQDRDMKLKAMWGGCKPMIGQIMECKVVSIEYHAGGQRKPTRSNKSQDVQYYPFVKVELERISPPEGMELPVSICLKPAVKPSARLNRLLRRSIAAMRRLDGVDTFMTPVNPTIYPDYHDIISDPMDLGTMWDRCGDNYYGSLVQFRNDLVLVCNNCRRYCYRRFPNLPETCDTIVSDGLAYLERAGVARQIAEAEGHINDMESLWQEHMSVCIVQAASAGTLADAERLASQLG 4287 +AV+ L +R+L +E + KQ TV+ A W++ +R KW +V A+TA QLL A GA ++VIDW + + LDR+ FL +P R +P KGD+V+YYG H + + + + +WG P G + + V SI YH GG S +++ Q PF +ELE P E + L P +P +LNRLL++++ AMR V F+ PV+ TIYPDY+D+IS+PMDL +W RC Y S+ +F+ +L LV +NCR YC +FP LP D V+ G+ L+ +A ++++ +E+LW +HMS I + T+ ++LA QLG Sbjct: 50 AAVEELARRMLHIEALVFKQDTVVDARWSE--FGRRRKWRTFVNNAQTAPQLLAAWGAFKDVIDWQAAQGCYSELDRRKFLSLLPAHLRNSMPDKGDEVLYYGDGHVLSMEAEAKAGYRGVWGSDPPRPGTVQQHTVKSISYHQGGS-----SRRAKGAQ--PFATIELEPTPVPRSFE---ELGLLPPTEPFGKLNRLLKKAVKAMRERADVAHFLVPVSRTIYPDYYDVISEPMDLNKLWKRCSACRYRSVEEFKRELALVASNCRLYCQDKFPTLPPAADAAVNVGMETLDEPKLAAELSKTVEDGKRLEALWNKHMSAAISASPELATMPGMQKLARQLG 381
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: W7U279_9STRA (Transcription initiation factor subunit taf1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U279_9STRA) HSP 1 Score: 196 bits (498), Expect = 1.970e-46 Identity = 239/911 (26.23%), Postives = 367/911 (40.29%), Query Frame = 1 Query: 1681 TQNKGHAGVMDDINAL-VNAEHTIWGPASAIAEQARAVQEAFTELYEDKVLGRLQQLAKAEAADSELPSKASDVNFNMKD------------------------------------------WREVAWWMGCREYAQWPVALRIMVLGWLCDEVLSTNSVRELVDRVVEAREVVAKQDKEMP--RIVKRMMKEQGERRRHRMYYGDVEAPIGPDGQPIPLEEPRTYTEKEMLQRALQEEPYDIQVARKLATIAVRMVPVGQDRDYRRYWLLDRKCDEHIYVECEGSW---ACLSTADEVKAVYEWLDRRGKRERALKNALRE----YLVDHMRVTEEELCAIDASEEIEHGISMRDSWENKEEEGQIESQ--GVDSATQESAMFQVCSTTRVEPLHLSNYDGRLYHKGWVMLDLNVTMGPQG-LGLVL---NVHNSAVVVQKKDDSSSSPAMRAGVMKGDHVVQVNGIIAKAPQQLATAIKSAGL-----SSDGQVLTLTLLREVE-LTTSSTGEPGQGLLLYSPLQNLQGVLLKREGQLSHPYAIGEGW--TAKRFDWRAGVVTATATAAVKVAESKEEGNGNTIGEPSVSAVQALRQRVLELELALVKQSTVLAATWTDPAVRQRI-KWCHYVERARTASQLLVALGALEEVIDWDSIDEVWKGLDRKAFLEKIPEERRKYLPSKGDKVVYYGIVHGKAAKQDRDMKLKAMWG---------GCKPMIGQIMECKVVSIEYHA-------------GGQRKPTRSNKSQDVQYYPFVKVELERISPPEGMELPVSICLKPAVKPSARLNRLLRRSIAAMRRLDGVDTFMTPVNPTIYPDYHDIISDPMDLGTMWDRCGDNYYGSLVQFRNDLVLVCNNCRRYCYRRFPNLPETCDTIVS---DGLAYLE 4137 ++ +G GV+DD+ + VN E GP +A+ E A+A+ E E + +VL L++ AK A + + D +D W+ V +G +A+ PV R+MVL WL DEV S+ +VREL++ V ARE K R K M Q + + Y P P LE E+E L+ + +LA +R+ P+G DR +RRYW +Y E E + ++ A+ WL R RE AL++ + E Y D +T+ E ++ R S E+ + + +S GV+ +++ AM LY ++ L +T +G LGLV + +A +++ + P R G+ D +V VNG + P+ + A++ + + L +LRE TS + + S +QG LL E ++ HP AIG W + + WR V+ A E K+ ++LR+ LELE L TVL+ + + KW Y+ A+T SQLL+ L L ++D ++ + ++R A+ +P+E+ LP G V+YY H KAA + MW G G + C+V IEYHA + K R N+ +YP K+ L R V+P A L+RLL R + + L D F PV+ YPDY+++I +PMD T+ R + YG L F DL L+ NC YC RFP LP D +V + + YLE Sbjct: 900 SKGRGAKGVLDDVRLVWVNCEQ-YHGPDAALTEVAQALSEELEEKIQTRVLEPLERRAKWLAGEGRKEGEVEDGKREEEDRVLGLGGDGEGEDGGVAASTTTEVGSKLTSSLGLASAPDIQGWKTVVDQLGRLTFAELPVKTRVMVLRWLADEVASSATVRELLENVAGAREPYRKMAARRTAFRAQKAHMAAQQQAAQASGY--------APPPSPANLEGWTQADEREFLRVS------------ELALKDLRLRPLGVDRFHRRYWTFPGDKKHAVYAEDEADGPVTVVYRSKVDLIALIRWLSDRTLREGALRSRVIELTERYYPDGPDLTQAINVPYSPVPNGEGAVNGRKSTESADAFCRYQSAYAGVNLPSEQQAMMP-----------------DLYR--YICYPLGITARERGCLGLVYADQELKLTAYRDHRQNLVRTPPFPRMGINVDDRIVLVNGKLIDGPKWPSGAVEDDSTLVHLPGGETEEFQLMILREAGGAQTSINVQQLPPRVTCSEWNFVQGWLLHLEREMCHPLAIGPDWEGSGAKARWRQMVMRALD------GEKKK--------------AESLRKAALELEGRLRACGTVLSKEDREGRAKGTGGKWRQYMSLAQTPSQLLLGLRLLHSLLDRRVLNRALQSMERAAWQALLPKEKSIELPDVGSFVIYYPQGH-KAAMRHNARFQGPMWNVEGPHEEQNGAAAGAGAVQVCQVHGIEYHAFDPTAKDPFASSAWARVKLARLNEPAYHYFYPERKLRLYR-----------------PVEPRASLSRLLARVVLSAMELREADQFCEPVDRNEYPDYYEMIWNPMDFTTLLSRVRRHMYGELSTFLKDLELISRNCHAYCDARFPTLPVLADQVVGVAKETVKYLE 1732
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: I2CQX7_NANGC (Transcription initiation factor TFIID subunit 1 (Fragment) n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CQX7_NANGC) HSP 1 Score: 186 bits (473), Expect = 1.110e-43 Identity = 215/793 (27.11%), Postives = 329/793 (41.49%), Query Frame = 1 Query: 1906 NMKDWREVAWWMGCREYAQWPVALRIMVLGWLCDEVLSTNSVRELVDRVVEAREVVAKQDKEMP--RIVKRMMKEQGERRRHRMYYGDVEAPIGPDGQPIPLEEPRTYTEKEMLQRALQEEPYDIQVARKLATIAVRMVPVGQDRDYRRYWLLDRKCDEHIYVECEGSW---ACLSTADEVKAVYEWLDRRGKRERALKNALRE----YLVDHMRVTEEELCAIDASEEIEHGISMRDSWENKEEEGQIESQ--GVDSATQESAMFQVCSTTRVEPLHLSNYDGRLYHKGWVMLDLNVTMGPQG-LGLVL---NVHNSAVVVQKKDDSSSSPAMRAGVMKGDHVVQVNGIIAKAPQQLATAIKSAGL-----SSDGQVLTLTLLREVE-LTTSSTGEPGQGLLLYSPLQNLQGVLLKREGQLSHPYAIGEGW--TAKRFDWRAGVVTATATAAVKVAESKEEGNGNTIGEPSVSAVQALRQRVLELELALVKQSTVLAATWTDPAVRQRI-KWCHYVERARTASQLLVALGALEEVIDWDSIDEVWKGLDRKAFLEKIPEERRKYLPSKGDKVVYYGIVHGKAAKQDRDMKLKAMWG---------GCKPMIGQIMECKVVSIEYHA-------------GGQRKPTRSNKSQDVQYYPFVKVELERISPPEGMELPVSICLKPAVKPSARLNRLLRRSIAAMRRLDGVDTFMTPVNPTIYPDYHDIISDPMDLGTMWDRCGDNYYGSLVQFRNDLVLVCNNCRRYCYRRFPNLPETCDTIVS---DGLAYLE 4137 +++ W+ V +G +A+ PV R+MVL WL DEV S+ +VREL++ V ARE K R K M Q + + Y P P LE E+E L+ + +LA +R+ P+G DR +RRYW +Y E E + ++ A+ WL R RE AL++ + E Y D +T+ E ++ R S E+ + + +S GV+ +++ AM LY ++ L +T +G LGLV + +A +++ + P R G+ D +V VNG + P+ + A++ + + L +LRE TS + + S +QG LL E ++ HP AIG W + + WR V+ A E K+ ++LR+ LELE L TVL+ + + KW Y+ A+T SQLL+ L L ++D ++ + ++R A+ +P+E+ LP G V+YY H KAA + MW G G + C+V IEYHA + K R N+ +YP K+ L R V+P A L+RLL R + + L D F PV+ YPDY+++I +PMD T+ R + YG L F DL L+ NC YC RFP LP D +V + + YLE Sbjct: 26 DIQGWKTVVDQLGRLTFAELPVKTRVMVLRWLADEVASSATVRELLENVAGAREPYRKMAARRTAFRAQKAHMAAQQQAAQASGY--------APPPSPANLEGWTQADEREFLRVS------------ELALKDLRLRPLGVDRFHRRYWTFPGDKKHAVYAEDEADGPVTVVYRSKVDLIALIRWLSDRTLREGALRSRVIELTERYYPDGPDLTQAINVPYSPVPNGEGAVNGRKSTESADAFCRYQSAYAGVNLPSEQQAMMP-----------------DLYR--YICYPLGITARERGCLGLVYADQELKLTAYRDHRQNLVRTPPFPRMGINVDDRIVLVNGKLIDGPKWPSGAVEDDSTLVHLPGGETEEFQLMILREAGGAQTSINVQQLPPRVTCSEWNFVQGWLLHLEREMCHPLAIGPDWEGSGAKARWRQMVMRALD------GEKKK--------------AESLRKAALELEGRLRACGTVLSKEDREGRAKGTGGKWRQYMSLAQTPSQLLLGLRLLHSLLDRRVLNRALQSMERAAWQALLPKEKSIELPDVGSFVIYYPQGH-KAAMRHNARFQGPMWNVEGPHEEQNGAAAGAGAVQVCQVHGIEYHAFDPTAKDPFASSAWARVKLARLNEPAYHYFYPERKLRLYR-----------------PVEPRASLSRLLARVVLSAMELREADQFCEPVDRNEYPDYYEMIWNPMDFTTLLSRVRRHMYGELSTFLKDLELISRNCHAYCDARFPTLPVLADQVVGVAKETVKYLE 741
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: A0A6H5L351_9PHAE (DNMT1-RFD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L351_9PHAE) HSP 1 Score: 163 bits (412), Expect = 2.100e-36 Identity = 159/530 (30.00%), Postives = 235/530 (44.34%), Query Frame = 1 Query: 1591 LSLYDIWQRIAGGWYDVTQPKAWLDPSAETTQ-NKGHAGVMDDINALVNAEHTIWGPASAIAEQARAVQEAFTELYEDKVLGRLQQLAK--------AEAADSELPSKA----SDVNFN--------MKDWREVAWWMGCREYAQWPVALRIMVLGWLCDEVLSTNSVRELVDRVVEAREVVAKQDKEMPRIVKRMMKEQGERRRHRMYYGDVEAPIGPDGQPIPLEEPRTYTEKEMLQRALQEEPYDIQVARKLATIAVRMVPVGQDRDYRRYWLL---DRKCDEHIYVECEGSWACLSTADEVKAVYEWLDRRGKRERALKNALREYLVDHMRVTEEELCAI------------DASEEIEHGISMRDSW-ENKEEEGQ-----------------------IESQGVDSATQESAMFQVCSTTRVEPLHLSNYDGRLYHK---GWVMLDLNVTMGPQGLGLVLNVHNSAVVVQ---KKDDSSSSPAMRAGVMKGDHVVQVNGIIAKAPQQLATAIKSAGLSSDGQVL 2982 L L I +R GWYD+ +P A +P E+ GHAGV D+ + G SAI EQAR V + F LYE VL L +L K A A EL SD + D E+ MG EY +W A R L WLCDE LS ++ +LV +V EA+EVV ++D+E+ V++ +++Q E R ++ R TE EM+ + E D++ R+L ++ VR+ P+G DRD RRYWL + + + ++ W + + + ALRE+L+ ++ V+ +EL + D G D E +EE+GQ + S G + Q A+ ++CS+ V+ LH G + GWVM DL V MGP GLGL L+V + VVV + S+P AGV GD +V V+ I+A+ P++LA +K GLS G+++ Sbjct: 1331 LDLGTILRRAENGWYDL-EPGA--EPPVESNSFGAGHAGVAYDVELMQQGWLEAKGADSAIFEQARGVVDEFLALYETHVLNPLVELDKDIRGSTAVAAAGRGELEEGRVLLRSDTDSEDARRGAAGCNDPLEMVRQMGSEEYKRWSPAARSRALAWLCDEALSAATMNDLVKKVQEAKEVVDRKDREIKAAVRQRLRDQ-EATEARGFHNPHN---------------RRSTEAEMITARMLMESPDVKTVRELGSVKVRLKPLGLDRDRRRYWLFATGEALTTGYSWSTTRFGGVTPGFPSSRRSTSGWTVEASESAPSRRAALREHLIANLGVSAQELEPVRRPFGGSSRGRSDVDRFGGGGNEGADEGDEGEEEDGQQYLGEPAEVAREKERERSAGLSALNSCGFAAEEQRRALKRLCSSFAVD-LHSLRAAGLAFELKTCGWVMRDLAVHMGPNGLGLQLDVRHGGVVVDGLTEMPPGVSNPGQAAGVRLGDLLVSVDTIVAETPRRLAQGLKDTGLSQSGKLV 1840
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: A0A835ZDW7_9STRA (Bromo domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW7_9STRA) HSP 1 Score: 148 bits (373), Expect = 8.930e-32 Identity = 140/493 (28.40%), Postives = 206/493 (41.78%), Query Frame = 1 Query: 1765 AIAEQARAVQEAFTELYEDKVLGRLQQLAKAEAADSELPSKASDVNFNMKDWREVAWWMGCREYAQWPVALRIMVLGWLCDEVLSTNSVRELVDRVVEAREVVAKQDKEMPRIVKRMMKEQGERRRHRMYYGDVEAPIGPDGQPIPLEEPRTYTEKEMLQRALQEEPYDIQVARKLATIAVRMVPVGQDRDYRRYWLLDRKCDE-------HIYVECEGSWACLSTADEVKAVYEWLDRRGKRERALKNALREYLVDHMRVTEEELCAIDASEEIEHGISMRDSWENKEEEGQIESQGVDSATQESAMFQVCSTTRVEPLHLSNYDGRLYHKGWVMLDLNVTMGPQGLGLVLNVHNSAVVVQK---KDDSSSSPAMRAGVMKGDHVVQVNGIIAKAPQQLAT--------AIKSAGLSSDGQVLTLTLLREVELTTSSTGEPGQGLLLYSPLQNLQGVLLKREGQLSHPYAIGEGWTA--KRFDWRAGVVTAT 3183 A +EQA A E F LY VL L+ +K D+ + +W +V M +EY QW V LR+ VL WLCD+ LST+++RE+ +R A+E +A + EM ++Y R LA + R+ P+G DR +RRYWL++R DE H+ E +W ST + +++WLD RG RE AL+ LR L+D+ EL A +E + + G ++ + Q SA+ C V P L D Y +G ++L +V G G G+ L ++ V++ K A RAGV+ D +V V G + P+++A A++ D ++ +R V L T P Q PLQ L G+LL E L HPY +GEGW K WR V++AT Sbjct: 1263 AASEQAAAAAE-FQTLYNRHVLAPLEHASKH--GDNGAVKAEDGAQGDSLEWGQVVQAMAQQEYGQWDVRLRVQVLAWLCDQCLSTDTLREVFERAQVAKEQLASESAEM----------------------------------------KSY--------------------RYLAALVQRLEPLGHDRHHRRYWLINR--DETAGADSGHVLAEDGTNWYSFSTVGSLLELHKWLDARGIRENALRQVLRHLLLDNGLSQPSELAAHHHPDEHCYARVAFLAPARILAAGSMDF--TMAQQQRSALTLGCKDLIVAPDALVPPDDTSYREGPLLLSADVEAGG-GHGMTLVAEKGSLFVKRACEKGGGGPDAAARAGVLAKDGLVAVRGRCVRTPEEVAALAEASHIVAVEVETADQDQPTYSIQFVRTVPLEDKDTKLPAQ----IPPLQYLAGLLLDSESLLCHPYNVGEGWVGGRKSVAWRQSVISAT 1683
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: A0A5D6YQF5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YQF5_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.710e-21 Identity = 87/296 (29.39%), Postives = 138/296 (46.62%), Query Frame = 1 Query: 3268 ALRQRVLELELALVKQSTVLAATWTDPAVRQRIKWCHYVERARTASQLLVALGAL-EEVIDWDSIDEVWKGLDRKAFLEKIPEERRKYLPSKGDKVVYYGIVHGKAAKQDRDMKLKAMWGGCKPMIGQI-MECKVVSIEYHAGGQRKPTRSNKSQ--DVQYYPFVKVELERISPPEGMELPVSICLKPAVKPSARLNRLLRRSIAAMRRLDGVDTFMTPVNPTIYPDYHDIISDPMDLGTMWDRCGDNYYGSLVQFRNDLVLVCNNCRRYCYRRFPNLPETCDTIVSDGLAYLERA 4143 A R L+LE A+V + R+R +W +E A T +QL L L +E ++ D+ + + LDRK + + +E R ++P G VVY+G H +A K+D K K + +P + + C V S+ YH GG + DV Y FV+ P S+ L P P+ RL+R+L R ++ ++ F+ PV+ +P+Y +I+ PMDL + + Y Q D+ L+C+NC +C RFP LP +V A ++RA Sbjct: 1522 AARDLFLQLEDAVVAAAAAGNEAVRPSWQRKRREWRLALEGACTYAQLAFLLHLLLDECVNVDAFMDQYARLDRKDWFKLRAKESRNFIPEVGKDVVYFGDGHAQALKEDAKAKKKRLAKKSEPPRSRATLVCAVESVSYHHGGGDPYALVVLAPRPDVSGYSFVRA-------------PGSV-LCPQPSPAQRLSRILMRVVSKLKLQTDAGPFLEPVSDREFPEYKEIVLQPMDLSAVTRKVRALEYRDAGQLLADMRLICSNCELFCDGRFPALPPLARNLVELADALVKRA 1803
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: W2Q4M5_PHYPN (Uncharacterized protein n=46 Tax=Phytophthora parasitica TaxID=4792 RepID=W2Q4M5_PHYPN) HSP 1 Score: 106 bits (265), Expect = 3.740e-19 Identity = 83/284 (29.23%), Postives = 126/284 (44.37%), Query Frame = 1 Query: 3289 ELELALVKQSTVLAATWTDPAVRQRIKWCHYVERARTASQLLVALGAL-EEVIDWDSIDEVWKGLDRKAFLEKIPEERRKYLPSKGDKVVYYGIVHGKAAKQDRDMKLKAMWGGCK-PMIGQIMECKVVSIEYHAGGQRKPTRSNKSQDVQYYPFVKVELERISPPEGMELPVSICLK-------PAVKPSARLNRLLRRSIAAMRRLDGVDTFMTPVNPTIYPDYHDIISDPMDLGTMWDRCGDNYYGSLVQFRNDLVLVCNNCRRYCYRRFPNLPETCDTIV 4113 ELE A V T R+R +W +E + T +QL+ L L EE ++ ++ ++ LDR+ +L+ P+E R ++P G VVY+G H A K+D K K P+ + C V + YH GG P+ L+ IS E C++ P RL R+ R +A ++ L F+ PV+ +P Y +II PMDLG M + Y + +F DL L+ +NC+ +C RFP LP +V Sbjct: 1481 ELENAAVAALNSGVETIRPSWQRKRHEWRLALEGSCTYAQLVFLLHLLLEEFLNVEAFMDLHIRLDRREWLKLRPKETRNFIPEVGKTVVYFGDGHALALKEDEKSKRKRFTQKSDTPVRKASVICTVEKVSYHHGGGD--------------PYALAVLKPISDMANHE-----CIREPGTLFCPLPSRDQRLARVFLRVLAKLKMLADAGPFLEPVSDREFPQYKEIILQPMDLGKMTTKASTLEYKNAAEFMTDLRLMRDNCQLFCEGRFPTLPPLAHNLV 1745
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: A0A0W8AY53_PHYNI (SWR1 complex bromodomain subunit bdf1 n=2 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8AY53_PHYNI) HSP 1 Score: 105 bits (263), Expect = 5.870e-19 Identity = 83/284 (29.23%), Postives = 126/284 (44.37%), Query Frame = 1 Query: 3289 ELELALVKQSTVLAATWTDPAVRQRIKWCHYVERARTASQLLVALGAL-EEVIDWDSIDEVWKGLDRKAFLEKIPEERRKYLPSKGDKVVYYGIVHGKAAKQDRDMKLKAMWGGCK-PMIGQIMECKVVSIEYHAGGQRKPTRSNKSQDVQYYPFVKVELERISPPEGMELPVSICLK-------PAVKPSARLNRLLRRSIAAMRRLDGVDTFMTPVNPTIYPDYHDIISDPMDLGTMWDRCGDNYYGSLVQFRNDLVLVCNNCRRYCYRRFPNLPETCDTIV 4113 ELE A V T R+R +W +E + T +QL+ L L EE ++ ++ ++ LDR+ +L+ P+E R ++P G VVY+G H A K+D K K P+ + C V + YH GG P+ L+ IS E C++ P RL R+ R +A ++ L F+ PV+ +P Y +II PMDLG M + Y + +F DL L+ +NC+ +C RFP LP +V Sbjct: 1091 ELENAAVAALNSGVETIRPSWQRKRHEWRLALEGSCTYAQLVFLLHLLLEEFLNVEAFMDLHIRLDRREWLKLRPKETRNFIPEVGKTVVYFGDGHALALKEDEKSKRKRFTQKSDTPVRKASVICTVEKVSYHHGGGD--------------PYALAVLKPISDMANHE-----CIREPGTLFCPLPSRDQRLARVFLRVLAKLKMLADAGPFLEPVSDREFPQYKEIILQPMDLGKMTTKASMLEYKNAAEFMTDLRLMRDNCQLFCEGRFPTLPPLAHNLV 1355
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Match: A0A1Y1W9W5_9FUNG (Bromodomain-containing protein (Fragment) n=1 Tax=Linderina pennispora TaxID=61395 RepID=A0A1Y1W9W5_9FUNG) HSP 1 Score: 68.9 bits (167), Expect = 3.470e-10 Identity = 32/75 (42.67%), Postives = 46/75 (61.33%), Query Frame = 1 Query: 3841 LNRLLRRSIAAMRRLDGVDTFMTPVNPTIYPDYHDIISDPMDLGTMWDRCGDNYYGSLVQFRNDLVLVCNNCRRY 4065 L L R I +++ D F+ PV+ T+ DY +I +PMDLGTM + N Y S+ +FR DL+LVC+N R+Y Sbjct: 16 LRSSLERLITRIKKRDSYGFFLDPVDTTVITDYLSVIDEPMDLGTMQSKVERNAYYSIDEFRRDLLLVCDNARKY 90 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1028.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1028.3.1 >prot_C-australica_Contig_1028.3.1 ID=prot_C-australica_Contig_1028.3.1|Name=mRNA_C-australica_Contig_1028.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=1738bp GLPPRAKAFLGDLFGEALSVWTCLQMFCGLLHLGRFTLDEFLAAVACDSPback to top mRNA from alignment at C-australica_Contig_1028:5518..16729+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1028.3.1 ID=mRNA_C-australica_Contig_1028.3.1|Name=mRNA_C-australica_Contig_1028.3.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=11212bp|location=Sequence derived from alignment at C-australica_Contig_1028:5518..16729+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1028:5518..16729+ >mRNA_C-australica_Contig_1028.3.1 ID=mRNA_C-australica_Contig_1028.3.1|Name=mRNA_C-australica_Contig_1028.3.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=5214bp|location=Sequence derived from alignment at C-australica_Contig_1028:5518..16729+ (Chrysoparadoxa australica CS_1217)back to top |