prot_C-australica_Contig_1028.2.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1028.2.1
Unique Nameprot_C-australica_Contig_1028.2.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length261
Homology
BLAST of mRNA_C-australica_Contig_1028.2.1 vs. uniprot
Match: A0A6H5L351_9PHAE (DNMT1-RFD domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L351_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 4.450e-38
Identity = 87/229 (37.99%), Postives = 118/229 (51.53%), Query Frame = 0
Query:    1 DEFIDRGSFRLARYGTRSAAREDDSGAVATANKSSTWGCIWVPQRRTLRIKLTALEDWCIDYSIAGKPVLWIISKYAWYKVAGGSWWDKVQSAPHYASTFTPTERKFRLMSLVMRALTANPNLTLSQVARRADAGTSGELTIQDLVQHHSFIL-------------------GQLEGLV-------PFVVTTQAGATQEVYPPDSQFAIGLAEAGNDWESAGATATITP 203
            DE++D  SFRLA  G+RS+A+ +   A   A K S   C+ VP RRT+RI++  ++DWCIDYS    PVLWIIS +AWYKVAG  WWD V   P YA  F P+ + F L  LV RAL ++P  +L+ V RR    TSG    +D+V+ H  +                    G L+G+        P       G++  V   D+ F   LA  G +WE+ G +    P
Sbjct:  229 DEWMDWESFRLAPCGSRSSAKREGESASTAARKESLTRCVLVPARRTVRIRINCVDDWCIDYSDTNHPVLWIISGHAWYKVAGSGWWDFVAPHPIYAPVFEPSRKSFALTCLVARALQSSPTSSLAAVGRRVSQITSGVFETRDIVEEHEVVAATIAGMGALSTKKKPDNAEGMLDGVGEDGPGSWPGANGDNNGSSDSVDAKDTLFLKELATKGQEWEANGRSFVRRP 457          
BLAST of mRNA_C-australica_Contig_1028.2.1 vs. uniprot
Match: D7G6R7_ECTSI (Bromo domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6R7_ECTSI)

HSP 1 Score: 151 bits (381), Expect = 8.360e-38
Identity = 73/159 (45.91%), Postives = 98/159 (61.64%), Query Frame = 0
Query:    1 DEFIDRGSFRLARYGTRSAAREDDSGAVATANKSSTWGCIWVPQRRTLRIKLTALEDWCIDYSIAGKPVLWIISKYAWYKVAGGSWWDKVQSAPHYASTFTPTERKFRLMSLVMRALTANPNLTLSQVARRADAGTSGELTIQDLVQHHSFILGQLEGL 159
            DE++D  SFRLA  G+RS+A+ +   A   A K S   C+ VP RRT+RI++  ++DWCIDYS    PVLWIIS +AWYKVAG  WWD V   P YA  F P+ + F L  LV RAL ++P  +L+ V RR    TSG    +D+V+ H  +   + G+
Sbjct:  108 DEWMDWESFRLAPCGSRSSAKREGESASTAARKESLTRCVLVPARRTVRIRINCVDDWCIDYSDTNHPVLWIISGHAWYKVAGSGWWDFVAPHPIYAPVFEPSRKSFALTCLVARALQSSPTSSLAAVGRRVSQITSGVFETRDIVEEHEVVAATIAGM 266          
BLAST of mRNA_C-australica_Contig_1028.2.1 vs. uniprot
Match: A0A835ZDW7_9STRA (Bromo domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDW7_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.560e-35
Identity = 70/161 (43.48%), Postives = 106/161 (65.84%), Query Frame = 0
Query:    1 DEFIDRGSFRLARYGTRSAAREDDSGAVATANKSSTWGCIWVPQRRTLRIKLTALEDWCIDYSIAGKPVLWIISKYAWYKVAGGSWWDKVQSAPHYASTFTPTERKFRLMSLVMRALTANPNLTLSQVARR--ADAGTSGELTIQDLVQHHSFILGQLEGL 159
            DE I R SFRLA YGTRS A  D  GA +   K  +W C+WVP R+T R+++ A+ DWC+D+S+  +P+LW+IS+ AWY V G SWWD+V+  P YA    P+  +F+L S ++R +   PN++L+ + +R  A +G  G + ++DL+++  +I  QLE L
Sbjct:  422 DEDIPRDSFRLAPYGTRSVA--DGGGAPSHLKKDKSWLCMWVPGRQTARVRIGAIVDWCVDFSVPARPLLWLISEAAWYLVGGESWWDQVRPHPTYARVCAPSNYRFQLASALVRGMQPQPNMSLNLIGKRLQASSGMWGFM-VRDLIENFPYIHQQLESL 579          
BLAST of mRNA_C-australica_Contig_1028.2.1 vs. uniprot
Match: A0A6G0WE00_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WE00_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 4.010e-8
Identity = 41/117 (35.04%), Postives = 59/117 (50.43%), Query Frame = 0
Query:   49 RIKLTALEDWCIDYSIAGKPVLWIISKYAWYKVAG--GSWWDKVQSAPHYASTFTPTERKFRLMSLVMRALTANPNL----TLSQVARRADAGTSGELTIQDLVQHHSFILGQLEGL 159
            RI L  + DWC+DYS  G P LW+I+K+AWYK+AG            PH+       E  F +  ++   L  NP L    TL QV  ++  G    LT + +++++ FI  QL  L
Sbjct:  506 RIWLPEISDWCLDYS-DGDPTLWVITKHAWYKIAGPISGMLPHWSYRPHFTKPRLMFEACFHIAFVLREWLPKNPGLSYRATLQQVIEQSILGRY-PLTTKFMIENYKFIASQLGSL 620          
BLAST of mRNA_C-australica_Contig_1028.2.1 vs. uniprot
Match: A0A485LQJ0_9STRA (Aste57867_24503 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQJ0_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 5.730e-7
Identity = 44/121 (36.36%), Postives = 61/121 (50.41%), Query Frame = 0
Query:   49 RIKLTALEDWCIDYSIAGKPVLWIISKYAWYKVAGGSWWDKVQSAPH--YASTFTPT----ERKFRLMSLVMRALTANPNL----TLSQVARRADAGTSGELTIQDLVQHHSFILGQLEGL 159
            R+ L  + DWC+DYS  G P LW+I+K AWYK+AG          PH  Y S FT      E  F +  ++   L  NP L    TL QV  ++  G    LT + +++++ FI  QL  L
Sbjct:  521 RVWLPEITDWCLDYS-DGDPTLWVITKNAWYKIAG----PISGMLPHWSYRSQFTKPRLMFEACFHIAFVLREWLPKNPGLAYRSTLQQVIEQSILGRY-PLTTKFMIENYKFIASQLGNL 635          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1028.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5L351_9PHAE4.450e-3837.99DNMT1-RFD domain-containing protein n=1 Tax=Ectoca... [more]
D7G6R7_ECTSI8.360e-3845.91Bromo domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A835ZDW7_9STRA1.560e-3543.48Bromo domain-containing protein n=1 Tax=Tribonema ... [more]
A0A6G0WE00_9STRA4.010e-835.04Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485LQJ0_9STRA5.730e-736.36Aste57867_24503 protein n=1 Tax=Aphanomyces stella... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022702DNA (cytosine-5)-methyltransferase 1, replication foci domainPFAMPF12047DNMT1-RFDcoord: 48..126
e-value: 6.9E-6
score: 26.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 210..246
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 209..246

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1028contigC-australica_Contig_1028:2833..4874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1028.2.1mRNA_C-australica_Contig_1028.2.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1028 2833..4876 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1028.2.1 ID=prot_C-australica_Contig_1028.2.1|Name=mRNA_C-australica_Contig_1028.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=261bp
DEFIDRGSFRLARYGTRSAAREDDSGAVATANKSSTWGCIWVPQRRTLRI
KLTALEDWCIDYSIAGKPVLWIISKYAWYKVAGGSWWDKVQSAPHYASTF
TPTERKFRLMSLVMRALTANPNLTLSQVARRADAGTSGELTIQDLVQHHS
FILGQLEGLVPFVVTTQAGATQEVYPPDSQFAIGLAEAGNDWESAGATAT
ITPAELLSLVEQREQRKEPKKDQKAPVKREHLSALPPDSELVKEVRAKAE
SQALKVKAAAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022702Cytosine_MeTrfase1_RFD