prot_C-australica_Contig_1026.3.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1026.3.1
Unique Nameprot_C-australica_Contig_1026.3.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length111
Homology
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BLAST of mRNA_C-australica_Contig_1026.3.1 vs. uniprot
Match: A0A835ZAD4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD4_9STRA)

HSP 1 Score: 65.5 bits (158), Expect = 1.630e-10
Identity = 37/81 (45.68%), Postives = 55/81 (67.90%), Query Frame = 0 
Query:   31 SQESAEEEVLFTSILSEPIRTLKRVSITSCGMSLC-MPIALLASSSSVPLSGQIAISATTIAVAVSTTGLLHFFTSNLIHR 110
            S  + +EE+L+   L+ PI+TLKRVSIT+C MS+   P+ L+  + SVPLSGQIA++   +  AV +T LLH+ T   +H+
Sbjct:   41 STNARKEELLYIGPLTAPIKTLKRVSITTCAMSMIGTPLLLVLGNDSVPLSGQIAVTGVALTAAVGSTALLHWCTRPYVHK 121
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1026.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZAD4_9STRA1.630e-1045.68Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1026contigC-australica_Contig_1026:5460..5873 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1026.3.1mRNA_C-australica_Contig_1026.3.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1026 5366..5903 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1026.3.1 ID=prot_C-australica_Contig_1026.3.1|Name=mRNA_C-australica_Contig_1026.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=111bp
MLWCTLRLGVTRRPIATFRRPFCQSQAFPKSQESAEEEVLFTSILSEPIR
TLKRVSITSCGMSLCMPIALLASSSSVPLSGQIAISATTIAVAVSTTGLL
HFFTSNLIHR*
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