prot_C-australica_Contig_1022.6.1 (polypeptide) Chrysoparadoxa australica CS_1217

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_C-australica_Contig_1022.6.1
Unique Nameprot_C-australica_Contig_1022.6.1
Typepolypeptide
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Sequence length529
Homology
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BLAST of mRNA_C-australica_Contig_1022.6.1 vs. uniprot
Match: A0A835Z2T5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2T5_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.600e-26
Identity = 91/274 (33.21%), Postives = 130/274 (47.45%), Query Frame = 0 
Query:  261 CMQDALLPGVKPGSCLQVLCFPDRIAFDEPFHATVTWCLDRARPAALSFDTLDNIEKFFISYGEGGSTKTFYDDEEEAYQCGINTFEITLPADLTIDNPEFSGDVMYKYFITPIFYGDDEKDTPQLLQDPFPNMLAEAGWNLLPDQYGALEGDCPVVDFELWNLTEPEPYDAIDIEI-PECHENGKDLDITFDVELNTIEESEITCNLMGGQGVDVYLSEEEIFVAQAY-----MNVEGS-GRYTITIPGELTEGAEIVENPYVSCWLGKPGMS 527
            C Q    PGVKPGSC QV+C P  IA   PFH  V WCL R R + L  DTLD   K +  YG  G T       E  +QCG +TFE T+ A       E++  V+++YF+TP+ +GD   D  +  ++P+PN +A  G +  P  Y  L  DC +    L N       D ID    P C + G+   +     L +   +++  NL  G G D YL  ++IFVA++       +V+    R+     G  T        PY++ +L   G +
Sbjct:   48 CKQPTPPPGVKPGSCFQVVCLPTSIAIGAPFHTRVRWCLQRPRRSHLVVDTLDVNTKEW--YGGDGYTP------EGEWQCGEHTFEQTMNAVPDPATGEYN--VLWRYFVTPV-WGDGRYDIRE--EEPYPNAIAATGIDRQP-LYDGLVDDCGLRPDRLVNFPPTGVQDGIDFPYTPYCIQPGEPFFVAVFTHLLSAPAADLHVNLHIGTGPDKYLGPDDIFVAESVEFGIPRDVDAIWSRHLARFTGRATAMLVGYSTPYLTAFLVPAGST 307
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1022.6.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z2T5_9STRA1.600e-2633.21Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 95..115
NoneNo IPR availableGENE3D2.60.120.260coord: 46..241
e-value: 6.6E-7
score: 31.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1022contigC-australica_Contig_1022:6547..10072 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1022.6.1mRNA_C-australica_Contig_1022.6.1Chrysoparadoxa australica CS_1217mRNAC-australica_Contig_1022 6234..10343 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_C-australica_Contig_1022.6.1 ID=prot_C-australica_Contig_1022.6.1|Name=mRNA_C-australica_Contig_1022.6.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=529bp
MRAPPQCVLLGLFLAQGLALTPEEVDEVEETTEPVAVPPPPINIYFGEPY
TGEPFPIPGVVQAEMFNVGPEAYFNFDLGLEGFVSEFRAGSPVEITAVGL
SLEEQKEAAERAEEEEIVVAAAPDLPENYKIDYIVPGEFLSYEVLITEPG
DYSAIISTSAVAPQKPFDISLKLNDDRCGVEENTLVRFQRRIREIHTADP
NVFIDHTETFTLPEDGVRGEATITVCFNDVENITFDKFELVLESEPGATF
APTLAPPPYTCMQDALLPGVKPGSCLQVLCFPDRIAFDEPFHATVTWCLD
RARPAALSFDTLDNIEKFFISYGEGGSTKTFYDDEEEAYQCGINTFEITL
PADLTIDNPEFSGDVMYKYFITPIFYGDDEKDTPQLLQDPFPNMLAEAGW
NLLPDQYGALEGDCPVVDFELWNLTEPEPYDAIDIEIPECHENGKDLDIT
FDVELNTIEESEITCNLMGGQGVDVYLSEEEIFVAQAYMNVEGSGRYTIT
IPGELTEGAEIVENPYVSCWLGKPGMSS*
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